-
1
-
-
0033859551
-
The role of lateral gene transfer in the evolution of isoprenoid biosynthesis pathways
-
Boucher, Y., and Doolittle, W.F. (2000) The role of lateral gene transfer In the evolution of isoprenoid biosynthesis pathways. Mol Microbiol 37: 703-716.
-
(2000)
Mol Microbiol
, vol.37
, pp. 703-716
-
-
Boucher, Y.1
Doolittle, W.F.2
-
2
-
-
0034939491
-
Bacterial origin for the isoprenoid biosynthesis enzyme HMG-CoA reductase of the archaeal orders Thermoplasmatales and Archaeoglobales
-
Boucher, Y., Huber, H., L'Haridon, S., Stetter, K.O., and Doolittle, W.F. (2001) Bacterial origin for the isoprenoid biosynthesis enzyme HMG-CoA reductase of the archaeal orders Thermoplasmatales and Archaeoglobales. Mol Biol Evol 18: 1378-1388.
-
(2001)
Mol Biol Evol
, vol.18
, pp. 1378-1388
-
-
Boucher, Y.1
Huber, H.2
L'Haridon, S.3
Stetter, K.O.4
Doolittle, W.F.5
-
3
-
-
0027217518
-
Purification and characterization of farnesyl diphosphate/geranylgeranyl diphosphate synthase. A thermostable blfunctional enzyme from Methanobacterium thermoautotrophicum
-
Chen, A., and Poulter, C.D. (1993) Purification and characterization of farnesyl diphosphate/geranylgeranyl diphosphate synthase. A thermostable blfunctional enzyme from Methanobacterium thermoautotrophicum. J Biol Chem 268: 11002-11007.
-
(1993)
J Biol Chem
, vol.268
, pp. 11002-11007
-
-
Chen, A.1
Poulter, C.D.2
-
4
-
-
0024259139
-
The lipids of archaebacteria
-
De Rosa, M., and Gambacorta, A. (1988) The lipids of archaebacteria. Prog Lipid Res 27: 153-175.
-
(1988)
Prog Lipid Res
, vol.27
, pp. 153-175
-
-
De Rosa, M.1
Gambacorta, A.2
-
5
-
-
0030760841
-
Evolutionary divergence and salinity-mediated selection in halophilic archaea
-
Dennis, P.P., and Shimmin, L.C. (1997) Evolutionary divergence and salinity-mediated selection in halophilic archaea. Microbiol Mol Biol Rev 61: 90-104.
-
(1997)
Microbiol Mol Biol Rev
, vol.61
, pp. 90-104
-
-
Dennis, P.P.1
Shimmin, L.C.2
-
6
-
-
0027507727
-
Characterization of the Staphylococcus aureus chromosomal gene pcrA, identified by mutations affecting plasmid pT181 replication
-
Iordanescu, S. (1993) Characterization of the Staphylococcus aureus chromosomal gene pcrA, identified by mutations affecting plasmid pT181 replication. Mol Gen Genet 241: 185-192.
-
(1993)
Mol Gen Genet
, vol.241
, pp. 185-192
-
-
Iordanescu, S.1
-
7
-
-
0033143422
-
Structural diversity of membrane lipids in members of Halobacteriaceae
-
Kamekura, M., and Kates, M. (1999) Structural diversity of membrane lipids In members of Halobacteriaceae. Biosci Biotechnol Biochem 63: 969-972.
-
(1999)
Biosci Biotechnol Biochem
, vol.63
, pp. 969-972
-
-
Kamekura, M.1
Kates, M.2
-
8
-
-
0031945225
-
Cell wall polymers in Archaea
-
Kandler, O., and Konig, H. (1998) Cell wall polymers in Archaea. Cellular Mol Life Sci 54: 305-308.
-
(1998)
Cellular Mol Life Sci
, vol.54
, pp. 305-308
-
-
Kandler, O.1
Konig, H.2
-
9
-
-
0035970116
-
An unusual isopentenyl diphosphate isomerase found in the mevalonate pathway gene cluster from Streptomyces sp. strain CL190
-
Kaneda, K., Kuzuyama, T., Takagi, M., Hayakawa, Y., and Seto, H. (2001) An unusual isopentenyl diphosphate isomerase found in the mevalonate pathway gene cluster from Streptomyces sp. strain CL190. Proc Natl Acad Sci USA 98: 932-937.
-
(2001)
Proc Natl Acad Sci USA
, vol.98
, pp. 932-937
-
-
Kaneda, K.1
Kuzuyama, T.2
Takagi, M.3
Hayakawa, Y.4
Seto, H.5
-
10
-
-
1942445204
-
Biochemistry of the lipids of extremely halophilic bacteria
-
Caplan, S.R., and Ginzburg, M., (eds). Amsterdam: Elsevier
-
Kates, M., and Kushwaha, N. (1978) Biochemistry of the lipids of extremely halophilic bacteria. In Energetics and Structure of Halophilic Microorganisms. Caplan, S.R., and Ginzburg, M., (eds). Amsterdam: Elsevier, pp. 461-480.
-
(1978)
Energetics and Structure of Halophilic Microorganisms
, pp. 461-480
-
-
Kates, M.1
Kushwaha, N.2
-
11
-
-
0031311293
-
Chain elongation in the isoprenoid biosynthetic pathway
-
Kellogg, B.A., and Poulter, C.D. (1997) Chain elongation in the isoprenoid biosynthetic pathway. Curr Opin Chem Biol 1: 570-578.
-
(1997)
Curr Opin Chem Biol
, vol.1
, pp. 570-578
-
-
Kellogg, B.A.1
Poulter, C.D.2
-
12
-
-
0034700150
-
Isoprenoid biosynthesis: The evolution of two ancient and distinct pathways across genomes
-
Lange, B.M., Rujan, T., Martin, W., and Croteau, R. (2000) Isoprenoid biosynthesis: the evolution of two ancient and distinct pathways across genomes. Proc Natl Acad Sci USA 97: 13172-13177.
-
(2000)
Proc Natl Acad Sci USA
, vol.97
, pp. 13172-13177
-
-
Lange, B.M.1
Rujan, T.2
Martin, W.3
Croteau, R.4
-
13
-
-
0036098562
-
Archaeal phylogeny based on ribosomal proteins
-
Matte-Tailliez, O., Brochier, C., Forterre, P., and Philippe, H. (2002) Archaeal phylogeny based on ribosomal proteins. Mol Biol Evol 19: 631-639.
-
(2002)
Mol Biol Evol
, vol.19
, pp. 631-639
-
-
Matte-Tailliez, O.1
Brochier, C.2
Forterre, P.3
Philippe, H.4
-
14
-
-
0034711214
-
CTP: 2,3-di-O-geranylgeranyl-sn-glycero-1-phosphate cytidyltransferase in the methanogenic archaeon Methanothermobacter thermoautotrophicus
-
Morii, H., Nishihara, M., and Koga, Y. (2000) CTP: 2,3-di-O- geranylgeranyl-sn-glycero-1-phosphate cytidyltransferase in the methanogenic archaeon Methanothermobacter thermoautotrophicus. J Biol Chem 275: 36568-36574.
-
(2000)
J Biol Chem
, vol.275
, pp. 36568-36574
-
-
Morii, H.1
Nishihara, M.2
Koga, Y.3
-
15
-
-
12944270421
-
Genome sequence of Halobacterium species NRC-1
-
Ng, W.V., Kennedy, S.P., Mahairas, G.G., Berquist, B., Pan, M., Shukla, H.D., et al. (2000) Genome sequence of Halobacterium species NRC-1. Proc Natl Acad Sci USA 97: 12176-12181.
-
(2000)
Proc Natl Acad Sci USA
, vol.97
, pp. 12176-12181
-
-
Ng, W.V.1
Kennedy, S.P.2
Mahairas, G.G.3
Berquist, B.4
Pan, M.5
Shukla, H.D.6
-
16
-
-
0029068254
-
sn-glycerol-1-phosphate dehydrogenase in Methanobacterium thermoautotrophicum: Key enzyme in biosynthesis of the enantiomeric glycerophosphate backbone of ether phospholipids of archaebacteria
-
Nishihara, M., and Koga, Y. (1995) sn-glycerol-1-phosphate dehydrogenase in Methanobacterium thermoautotrophicum: key enzyme in biosynthesis of the enantiomeric glycerophosphate backbone of ether phospholipids of archaebacteria. J Biochem (Tokyo) 117: 933-935.
-
(1995)
J Biochem (Tokyo)
, vol.117
, pp. 933-935
-
-
Nishihara, M.1
Koga, Y.2
-
17
-
-
0033026470
-
sn-glycerol-1-phosphate-forming activities in Archaea: Separation of archaeal phospholipid biosynthesis and glycerol catabolism by glycerophosphate enantiomers
-
Nishihara, M., Yamazaki, T., Oshima, T., and Koga, Y. (1999) sn-glycerol-1-phosphate-forming activities in Archaea: separation of archaeal phospholipid biosynthesis and glycerol catabolism by glycerophosphate enantiomers. J Bacteriol 181: 1330-1333.
-
(1999)
J Bacteriol
, vol.181
, pp. 1330-1333
-
-
Nishihara, M.1
Yamazaki, T.2
Oshima, T.3
Koga, Y.4
-
18
-
-
0029785708
-
Conversion of product specificity of archaebacterial geranylgeranyl- diphosphate synthase. Identification of essential amino acid residues for chain length determination of prenyltransferase reaction
-
Ohnuma, S., Hirooka, K., Hemmi, H., Ishida, C., Ohto, C., and Nishino, T. (1996) Conversion of product specificity of archaebacterial geranylgeranyl-diphosphate synthase. Identification of essential amino acid residues for chain length determination of prenyltransferase reaction. J Biol Chem 271: 18831-18837.
-
(1996)
J Biol Chem
, vol.271
, pp. 18831-18837
-
-
Ohnuma, S.1
Hirooka, K.2
Hemmi, H.3
Ishida, C.4
Ohto, C.5
Nishino, T.6
-
19
-
-
0031040182
-
Conversion from archaeal geranylgeranyl diphosphate synthase to farnesyl diphosphate synthase. Two amino acids before the first aspartate-rich motif solely determine eukaryotic farnesyl diphosphate synthase activity
-
Ohnuma, S., Hirooka, K., Ohto, C., and Nishino, T. (1997) Conversion from archaeal geranylgeranyl diphosphate synthase to farnesyl diphosphate synthase. Two amino acids before the first aspartate-rich motif solely determine eukaryotic farnesyl diphosphate synthase activity. J Biol Chem 272: 5192-5198.
-
(1997)
J Biol Chem
, vol.272
, pp. 5192-5198
-
-
Ohnuma, S.1
Hirooka, K.2
Ohto, C.3
Nishino, T.4
-
20
-
-
0032500606
-
A pathway where polyprenyl diphosphate elongates in prenyltransferase. Insight into a common mechanism of chain length determination of prenyltransferases
-
Ohnuma, S., Hirooka, K., Tsuruoka, N., Yano, M., Ohto, C., Nakane, H., and Nishino, T. (1998) A pathway where polyprenyl diphosphate elongates in prenyltransferase. Insight into a common mechanism of chain length determination of prenyltransferases. J Biol Chem 273: 26705-26713.
-
(1998)
J Biol Chem
, vol.273
, pp. 26705-26713
-
-
Ohnuma, S.1
Hirooka, K.2
Tsuruoka, N.3
Yano, M.4
Ohto, C.5
Nakane, H.6
Nishino, T.7
-
21
-
-
0031773680
-
MODELTEST: Testing the model of DNA substitution
-
Posada, D., and Crandall, K.A. (1998) MODELTEST: testing the model of DNA substitution. Bioinformatics 14: 817-818.
-
(1998)
Bioinformatics
, vol.14
, pp. 817-818
-
-
Posada, D.1
Crandall, K.A.2
-
22
-
-
0036134938
-
Complete polar lipid composition of Thermoplasma acidophilum HO-62 determined by high-performance liquid chromatography with evaporative light-scattering detection
-
Shimada, H., Nemoto, N., Shida, Y., Oshima, T., and Yamagishi, A. (2002) Complete polar lipid composition of Thermoplasma acidophilum HO-62 determined by high-performance liquid chromatography with evaporative light-scattering detection. J Bacteriol 184: 556-563.
-
(2002)
J Bacteriol
, vol.184
, pp. 556-563
-
-
Shimada, H.1
Nemoto, N.2
Shida, Y.3
Oshima, T.4
Yamagishi, A.5
-
23
-
-
0033793828
-
Biosynthesis of isoprenoids via mevalonate in Archaea: The lost pathway
-
Smit, A., and Mushegian, A. (2000) Biosynthesis of isoprenoids via mevalonate in Archaea: the lost pathway. Genome Res 10: 1468-1484.
-
(2000)
Genome Res
, vol.10
, pp. 1468-1484
-
-
Smit, A.1
Mushegian, A.2
-
24
-
-
0035846527
-
Geranylgeranylglyceryl phosphate synthase. Characterization of the recombinant enzyme from Methanobacterium thermoautotrophicum
-
Soderberg, T., Chen, A., and Poulter, C.D. (2001) Geranylgeranylglyceryl phosphate synthase. Characterization of the recombinant enzyme from Methanobacterium thermoautotrophicum. Biochemistry 40: 14847-14854.
-
(2001)
Biochemistry
, vol.40
, pp. 14847-14854
-
-
Soderberg, T.1
Chen, A.2
Poulter, C.D.3
-
26
-
-
0028209988
-
A novel prenyltransferase, farnesylgeranyl diphosphate synthase, from the haloalkaliphilic archaeon, Natronobacterium pharaonis
-
Tachibana, A. (1994) A novel prenyltransferase, farnesylgeranyl diphosphate synthase, from the haloalkaliphilic archaeon, Natronobacterium pharaonis. FEBS Lett 341: 291-294.
-
(1994)
FEBS Lett
, vol.341
, pp. 291-294
-
-
Tachibana, A.1
-
27
-
-
0033979844
-
Novel prenyltransferase gene encoding farnesylgeranyl diphosphate synthase from a hyperthermophilic archaeon, Aeropyrum pernix. Molecularevolution with alteration in product specificity
-
Tachibana, A., Yano, Y., Otani, S., Nomura, N., Sako, Y., and Taniguchi, M. (2000) Novel prenyltransferase gene encoding farnesylgeranyl diphosphate synthase from a hyperthermophilic archaeon, Aeropyrum pernix. Molecularevolution with alteration in product specificity. Eur J Biochem 267: 321-328.
-
(2000)
Eur J Biochem
, vol.267
, pp. 321-328
-
-
Tachibana, A.1
Yano, Y.2
Otani, S.3
Nomura, N.4
Sako, Y.5
Taniguchi, M.6
-
28
-
-
0027968068
-
CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
-
Thompson, J.D., Higgins, D.G., and Gibson, T.J. (1994) CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res 22: 4673-4680.
-
(1994)
Nucleic Acids Res
, vol.22
, pp. 4673-4680
-
-
Thompson, J.D.1
Higgins, D.G.2
Gibson, T.J.3
-
29
-
-
0001279038
-
Preparation of genomic DNA from bacteria
-
Ausabel, F.M., Brent, R., Kingston, R.E., Moore, D.D., Seidmon, J.A., Stuhl, K., and Smith, J.A. (eds). New York: John Wiley and Sons
-
Wilson, K. (1994) Preparation of genomic DNA from bacteria. In Current Protocols in Molecular Biology Vol. 1. Ausabel, F.M., Brent, R., Kingston, R.E., Moore, D.D., Seidmon, J.A., Stuhl, K., and Smith, J.A. (eds). New York: John Wiley and Sons, pp. 2.4.1.-2.4.5.
-
(1994)
Current Protocols in Molecular Biology
, vol.1
, pp. 241-245
-
-
Wilson, K.1
-
30
-
-
0000312562
-
Biosynthesis of archaebacterial ether lipids. Formation of ether linkages by prenyltransferases
-
Zhang, D., and Poulter, C.D. (1993) Biosynthesis of archaebacterial ether lipids. Formation of ether linkages by prenyltransferases. J Am Chem Soc 115: 1270-1277.
-
(1993)
J Am Chem Soc
, vol.115
, pp. 1270-1277
-
-
Zhang, D.1
Poulter, C.D.2
|