Pyrosequencing demonstrated complex microbial communities in a membrane filtration system for a drinking water treatment plant

Microbes and Environments

Volumn 26, Issue 2, 2011, Pages 149-155

  Kwon, Soondong ^a   Moon, Eunjeong ^a   Kim, Taek Seung ^a   Hong, Seungkwan ^a   Park, Hee Deung ^a  

^a Korea University   (South Korea)

Author keywords

Drinking water; Membrane; Microbial community; Pathogen; Pyrosequencing

Indexed keywords

BACTERIAL DNA; FRESH WATER; RNA 16S;

ARTICLE; BACTERIUM; BIODIVERSITY; BIOFILM; DNA SEQUENCE; FILTRATION; GENETICS; INSTRUMENTATION; ISOLATION AND PURIFICATION; METHODOLOGY; MICROBIOLOGY; MOLECULAR GENETICS; PHYLOGENY; SOUTH KOREA; WATER MANAGEMENT; WATER SUPPLY;

BACTERIA; BIODIVERSITY; BIOFILMS; DNA, BACTERIAL; FILTRATION; FRESH WATER; MOLECULAR SEQUENCE DATA; PHYLOGENY; REPUBLIC OF KOREA; RNA, RIBOSOMAL, 16S; SEQUENCE ANALYSIS, DNA; WATER PURIFICATION; WATER SUPPLY;

AEROMONAS; ALPHAPROTEOBACTERIA; BACTERIA (MICROORGANISMS); BETAPROTEOBACTERIA; CHROMOBACTERIUM; LEGIONELLA; PSEUDOMONAS;

EID: 79958242142     PISSN: 13426311     EISSN: 13426311     Source Type: Journal    
DOI: 10.1264/jsme2.ME10205     Document Type: Article

References (36)

1. Adham, S.S., J.G. Jacangelo, and J.M. Laine. 1995. Low-pressure membranes: Assessing integrity. J. AWWA 87:62-75.
2. Chen, C.L., W.T. Liu, M.L. Chong, M.T. Wong, S.L. Ong, H. Seah, and W.J. Ng. 2004. Community structure of microbial biofilms associated with membrane-based water purification processes as revealed using a polyphasic approach. Appl. Microbiol. Biotechnol. 63:466-473.
3. Chon, K., J.S. Chang, H. Oh, E. Lee, and J. Cho. 2009. Community of bacteria attached on the PVDF MF membrane surface fouled from drinking water treatment, in Seoul, Korea. Drinking Water Eng. Sci. 2:35-39.
4. Craun, G.F., N. Nwachuku, R.L. Calderon, and M.F. Craun. 2002. Outbreaks in drinking-water systems, 1991-1998. J. Environ. Health. 65:16-23.
5. Cui, Z.F., S. Chang, and A.G. Fane. 2003. The use of gas bubbling to enhance membrane processes. J. Membr. Sci. 221:1-35.
6. Eichler, S., R. Christen, C. Holtje, P. Westphal, J. Botel, I. Brettar, A. Mehling, and M.G. Hofle. 2006. Composition and dynamics of bacterial communities of a drinking water supply system as assessed by RNA- and DNA-based 16S rRNA gene fingerprinting. Appl. Environ. Microbiol. 72:1858-1872.
7. Ellis, K.V. 1985. Slow sand filtration. CRC Crit. Rev. Environ. Sci. Technol. 15:315-354.
8. Frank, J.A., C.I. Reich, S. Sharma, J.S. Weisbaum, B.A. Wilson, and G.J. Olsen. 2008. Critical evaluation of two primers commonly used for amplification of bacterial 16S rRNA genes. Appl. Environ. Microbiol. 74:2461-2470.
9. Guo, H., Y. Wyart, J. Perot, F. Nauleau, and P. Moulin. 2010. Lowpressure membrane integrity tests for drinking water treatment: A review. Water Res. 44:41-57.
10. Hong, S.K., F.A. Miller, and J.S. Taylor. 2001. Assessing pathogen removal efficiency of microfiltration by monitoring membrane Integrity. Water Sci. Technol: Water Suppl. 1:43-48.
11. Hong, P.Y., C.C. Hwang, F.Q. Ling, G.L. Andersen, M.W. LeChevallier, and W.T. Liu. 2010. Pyrosequencing analysis of bacterial biofilm communities in water meters of a drinking water distribution system. Appl. Environ. Microbiol. 76:5631-5635.
12. Huisman, L., and W.E. Wood. 1974. Slow Sand Filtration. World Health Organization, Geneva, Switzerland.
13. Lazcka, O., F.J. Del Campo, and F.X. Munoz. 2007. Pathogen detection: A perspective of traditional methods and biosensors. Biosens. Bioelectron. 22:1205-1217.
14. LeChevallier, M.W., and K.-K. Au. 2004. Water Treatment and Pathogen Control: Process efficiency in achieving safe drinking water. IWA Publishing, London, UK.
15. Lovins III, W.A., J.S. Taylor, and S.K. Hong. 2002. Micro-organism rejection by membrane systems. Environ. Eng. Sci. 19:453-465.
16. Madigan, M.T., and J.M. Martinko. 2006. Brock Biology of Microorganisms. Prentice Hall, Upper Saddle River, USA.
17. Martiny, A.C., H.-J. Albrechtsen, E. Arvin, and S. Molin. 2005. Identification of bacteria in biofilm and bulk water samples from a nonchlorinated model drinking water distribution system: Detection of a large nitrite-oxidizing population associated with Nitrospira spp. Appl. Environ. Microbiol. 71:8611-8617.
18. Muyzer, G., E.C. Dewaal, and A.G. Uitterlinden. 1993. Profiling of complex microbial populations by denaturing gradient gel electrophoresis analysis of polymerase chain reaction-amplified genes coding for 16S rRNA. Appl. Environ. Microbiol. 59:695-700.
19. Okabe, S., M. Oshiki, Y. Kamagata, et al. 2010. A great leap forward in microbial ecology. Microbes Environ 25:230-240.
20. Page, R.D.M. 1996. TreeView: An application to display phylogenetic trees on personal computers. Comput. Appl. Biosci. 12:357-358.
21. Poitelon, J.-B., M. Joyeux, B. Welté, J.-P. Duguet, E. Prestel, O. Lespinet, and M.S. DuBow. 2009. Assessment of phylogenetic diversity of bacterial microflora in drinking water using serial analysis of ribosomal sequence tags. Water Res. 43:4197-4206.
22. Saitou, N., and M. Nei. 1987. The neighbor-joining method-a new method for reconstructing phylogenetic trees. Mol. Biol. Evol. 4:406-425.
23. Sanapareddy, N., T.J. Hamp, L.C. Gonzalez, H.A. Hilger, A.A. Fodor, and S.M. Clinton. 2009. Molecular diversity of a North Carolina wastewater treatment plant as revealed by pyrosequencing. Appl. Environ. Microbiol. 75:1688-1696.
24. Schloss, P.D., S.L. Westcott, T. Ryabin, et al. 2009. Introducing mothur: Open-source, platform-independent, community-supported software for describing and comparing microbial communities. Appl. Environ. Microbiol. 75:7537-7541.
25. Sharma, S., P. Sachdeva, and J.S. Virdi. 2003. Emerging water-borne pathogens. Appl. Microbiol. Biotechnol. 61:424-428.
26. Taylor, J.S., and S.K. Hong. 2000. Potable water quality and membrane technology. Lab Medicine 31:563-568.
27. Thompson, J.D., T.J. Gibson, F. Plewniak, F. Jeanmougin, and D.G. Higgins. 1997. The CLUSTAL_X windows interface: Flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res. 25:4876-4882.
28. Torrella, F., and R.Y. Morita. 1981. Microcultural study of bacterial size changes and microcolony and ultramicrocolony formation by heterotrophic bacteria in seawater. Appl. Environ. Microbiol. 41:518-527.
29. Ueda, T., K. Hata, Y. Kikuoka, and O. Seino. 1997. Effects of aeration on suction pressure in a submerged membrane bioreactor. Water Res. 31:489-494.
30. Van der Bruggen, B., C. Vandecasteele, T. Van Gestel, W. Doyen, and R. Leysen. 2003. A review of pressure-driven membrane processes in wastewater treatment and drinking water production. Environmen. Prog. 22:46-56.
31. Walpole, R.E., R.H. Myers, S.L. Myers, and K. Ye. 2007. Probability and Statistics for Engineers and Scientists. Prentice Hall, Upper Saddle River, USA.
32. Wang, Q., G.M. Garrity, J.M. Tiedje, and J.R. Cole. 2007. Naïve bayesian classifier for rapid assignment of rRNA sequences into the new bacterial taxonomy. Appl. Environ. Microbiol. 73:5261-5267.
33. Williams, M.M., J.W.S. Domingo, M.C. Meckes, C.A. Kelty, and H.S. Rochon. 2004. Phylogenetic diversity of drinking water bacteria in a distribution system simulator. J. Appl. Microbiol. 96:954-964.
34. Young, C.-C., A.B. Arun, W.-A. Lai, W.-M. Chen, J.-H. Chao, F.-T. Shen, P.D. Rekha, and P. Kämpfer. 2008. Chromobacterium aquaticum sp. nov., isolated from spring water samples. Int. J. Syst. Evol. Microbiol. 58:877-880.
35. Yousef, A.E. 2008. Detection of bacterial pathogens in different matrices: Current practices and challenges, p. 31-48, In Zourob, M., S. Elwary, and A. Turner (ed.), Principles of Bacterial Detection: Biosensors, Recognition Receptors and Microsystems, Springer, New York, USA.
36. Zwart, G., B.C. Crump, M.P. Kamst-van Agterveld, F. Hagen, and S.K. Han. 2002. Typical freshwater bacteria: An analysis of available 16S rRNA gene sequences from plankton of lakes and rivers. Aquatic Microb. Ecol. 28:141-155.