메뉴 건너뛰기




Volumn 37, Issue 2, 2011, Pages 213-225

Physical aspects of precision in genetic regulation

Author keywords

Diffusion; Dimensionality; Monte Carlo simulation; Noise; Transcription factor

Indexed keywords

TRANSCRIPTION FACTOR;

EID: 79958238839     PISSN: 00920606     EISSN: 15730689     Source Type: Journal    
DOI: 10.1007/s10867-010-9208-2     Document Type: Article
Times cited : (3)

References (19)
  • 1
    • 0003064682 scopus 로고
    • Reduction of dimensionality in biological diffusion processes
    • Rich, A., Davidson, N. (eds.) Freeman, San Francisco
    • Adam, G., Delbruck, M.: Reduction of dimensionality in biological diffusion processes. In: Rich, A., Davidson, N. (eds.) Structural Chemistry and Molecular Biology, pp. 198-215. Freeman, San Francisco (1968)
    • (1968) Structural Chemistry and Molecular Biology , pp. 198-215
    • Adam, G.1    Delbruck, M.2
  • 2
    • 0017143653 scopus 로고
    • Association kinetics with coupled diffusional flows. Special application to the lac repressor-operator system
    • Berg, O.G., Blomberg, C.: Association kinetics with coupled diffusional flows. Special application to the lac repressor-operator system. Biophys. Chem. 4, 367-381 (1976)
    • (1976) Biophys. Chem. , vol.4 , pp. 367-381
    • Berg, O.G.1    Blomberg, C.2
  • 3
    • 0019887628 scopus 로고
    • Diffusion-driven mechanisms of protein translocation on nucleic acids. 1. Models and theory
    • Berg, O.G., Winter, R.B., von Hippel, P.H.: Diffusion-driven mechanisms of protein translocation on nucleic acids. 1. Models and theory. Biochemistry 20, 6929-6948 (1981)
    • (1981) Biochemistry , vol.20 , pp. 6929-6948
    • Berg, O.G.1    Winter, R.B.2    Von Hippel, P.H.3
  • 4
    • 3042579602 scopus 로고    scopus 로고
    • How do site-specific DNA-binding proteins find their targets?
    • Halford, S.E., Marko, J.F.: How do site-specific DNA-binding proteins find their targets? Nucleic Acids Res. 32, 3040-3052 (2004)
    • (2004) Nucleic Acids Res. , vol.32 , pp. 3040-3052
    • Halford, S.E.1    Marko, J.F.2
  • 5
    • 10044223573 scopus 로고    scopus 로고
    • Kinetics of protein-DNA interaction: Facilitated target location in sequence-dependent potential
    • Slutsky, M., Mirny, L.A.: Kinetics of protein-DNA interaction: facilitated target location in sequence-dependent potential. Biophys. J. 87, 4021-4035 (2004)
    • (2004) Biophys. J. , vol.87 , pp. 4021-4035
    • Slutsky, M.1    Mirny, L.A.2
  • 6
    • 45549102933 scopus 로고    scopus 로고
    • Protein-DNA interactions: Reaching and recognizing the targets
    • Cherstvy, A.G., Kolomeisky, A.B., Kornyshev, A.A.: Protein-DNA interactions: reaching and recognizing the targets. J. Phys. Chem. B 112, 4741-4750 (2008)
    • (2008) J. Phys. Chem. B , vol.112 , pp. 4741-4750
    • Cherstvy, A.G.1    Kolomeisky, A.B.2    Kornyshev, A.A.3
  • 7
    • 70349507801 scopus 로고    scopus 로고
    • Searching fast for a target on DNA without falling to traps
    • Benichou, O., Kafri, Y., Sheinman, M., Voituriez, R.: Searching fast for a target on DNA without falling to traps. Phy. Rev. Lett. 103, 138102 (2009)
    • (2009) Phy. Rev. Lett. , vol.103 , pp. 138102
    • Benichou, O.1    Kafri, Y.2    Sheinman, M.3    Voituriez, R.4
  • 8
    • 33746786817 scopus 로고    scopus 로고
    • How does a protein search for the specific site on DNA: The role of disorder
    • Hu, T., Shklovskii, B.I.: How does a protein search for the specific site on DNA: the role of disorder. Phy. Rev. E 74, 021903 (2006)
    • (2006) Phy. Rev. E , vol.74 , pp. 021903
    • Hu, T.1    Shklovskii, B.I.2
  • 9
    • 30344463841 scopus 로고    scopus 로고
    • Optimal target search on a fast-folding polymer chain with volume exchange
    • Lomholt, M.A., Ambjörnsson, T., Metzler, R.: Optimal target search on a fast-folding polymer chain with volume exchange. Phys. Rev. Lett. 95, 260603 (2005)
    • (2005) Phys. Rev. Lett. , vol.95 , pp. 260603
    • Lomholt, M.A.1    Ambjörnsson, T.2    Metzler, R.3
  • 10
    • 70349292370 scopus 로고    scopus 로고
    • Dynamical model of DNA-protein interaction: Effect of protein charge distribution and mechanical properties
    • Florescu, A.M., Joyeux, M.: Dynamical model of DNA-protein interaction: effect of protein charge distribution and mechanical properties. J. Chem. Phys. 131, 105102 (2009)
    • (2009) J. Chem. Phys. , vol.131 , pp. 105102
    • Florescu, A.M.1    Joyeux, M.2
  • 14
    • 0001138912 scopus 로고
    • Drei vortrage über diffusion, brownsche bewegung und koagulation von kolloidteilchen
    • von Smoluchowski, M.: Drei vortrage über diffusion, brownsche bewegung und koagulation von kolloidteilchen. Z. Phys. 17, 557-585 (1916)
    • (1916) Z. Phys. , vol.17 , pp. 557-585
    • Von Smoluchowski, M.1
  • 16
    • 34249932435 scopus 로고    scopus 로고
    • Probing transcription factor dynamics at the single-molecule level in a living cell
    • Elf, J., Li, G. W. , Xie, S.: Probing transcription factor dynamics at the single-molecule level in a living cell. Science 316, 1191-1194 (2007)
    • (2007) Science , vol.316 , pp. 1191-1194
    • Elf, J.1    Li, G.W.2    Xie, S.3
  • 17
    • 0017664223 scopus 로고
    • Physics of chemoreception
    • Berg, H.C., Purcell, E.M.: Physics of chemoreception. Biophys. J. 20, 193-219 (1977)
    • (1977) Biophys. J. , vol.20 , pp. 193-219
    • Berg, H.C.1    Purcell, E.M.2
  • 18
    • 66549110304 scopus 로고    scopus 로고
    • Diffusion, dimensionality and noise in transcriptional regulation
    • Tkacik, G., Bialek, W.: Diffusion, dimensionality and noise in transcriptional regulation. Phys. Rev. E 79, 051901 (2009)
    • (2009) Phys. Rev. E , vol.79 , pp. 051901
    • Tkacik, G.1    Bialek, W.2
  • 19
    • 0004232671 scopus 로고
    • Princeton University Press, New Jersey
    • Berg, H.C.: Random Walks in Biology. Princeton University Press, New Jersey (1983)
    • (1983) Random Walks in Biology
    • Berg, H.C.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.