메뉴 건너뛰기




Volumn 156, Issue 1, 2011, Pages 290-297

Study of the interaction between 10-hydroxycamptothecine and DNA with the use of ethidium bromide dye as a fluorescence probe

Author keywords

10 Hydroxycamptothecine; DNA; Ethidium bromide; MCR ALS; PARAFAC; Spectroscopy

Indexed keywords

10-HYDROXYCAMPTOTHECINE; BINDING CONSTANT; BINDING NUMBER; COOPERATIVE INTERACTIONS; ETHIDIUM BROMIDE; FLUORESCENCE PROBES; INTERACTION SYSTEMS; MCR-ALS; MULTIVARIATE CURVE RESOLUTION-ALTERNATING LEAST SQUARES; PARAFAC; PARALLEL FACTOR ANALYSIS; SPECTROFLUORIMETRY; TERNARY COMPLEX; THREE COMPONENT; UV-VIS SPECTROMETRY;

EID: 79957872930     PISSN: 09254005     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.snb.2011.04.035     Document Type: Article
Times cited : (47)

References (40)
  • 1
    • 0033971703 scopus 로고    scopus 로고
    • Camptothecine from callus cultures of Nothapodytes foetida
    • DOI 10.1023/A:1005666223003
    • V. Ciddi, and M.L. Shuler Camptothecine from callus cultures of Nothapodytes foetida Biotechnol. Lett. 22 2000 129 132 (Pubitemid 30084559)
    • (2000) Biotechnology Letters , vol.22 , Issue.2 , pp. 129-132
    • Ciddi, V.1    Shuler, M.L.2
  • 2
    • 33846562114 scopus 로고    scopus 로고
    • The thermodynamic dissociation constants of the anticancer drugs camptothecine, 7-ethyl-10-hydroxycamptothecine, 10-hydroxycamptothecine and 7-ethylcamptothecine by the least-squares nonlinear regression of multiwavelength spectrophotometric pH-titration data
    • DOI 10.1016/j.aca.2006.11.049, PII S0003267006022185
    • M. Meloun, S. Bordovska, and A. Vrana The thermodynamic dissociation constants of the anticancer drugs camptothecine, 7-ethyl-10- hydroxycamptothecine, 10-hydroxycamptothecine and 7-ethylcamptothecine by the least-squares nonlinear regression of multiwavelength spectrophotometric pH-titration data Anal. Chim. Acta 584 2007 419 432 (Pubitemid 46172446)
    • (2007) Analytica Chimica Acta , vol.584 , Issue.2 , pp. 419-432
    • Meloun, M.1    Bordovska, S.2    Vrana, A.3
  • 3
    • 0025335205 scopus 로고
    • Camptothecin-stabilized topoisomerase I-DNA adducts cause premature termination of transcription
    • DOI 10.1021/bi00475a028
    • C. Bendixen, B. Thomsen, J. Alsner, and O. Westergaard Camptothecin-stabilized topoisomerase I-DNA adducts cause premature termination of transcription Biochemistry 29 1990 5613 5619 (Pubitemid 20202289)
    • (1990) Biochemistry , vol.29 , Issue.23 , pp. 5613-5619
    • Bendixen, C.1    Thomsen, B.2    Alsner, J.3    Westergaard, O.4
  • 4
    • 0037385384 scopus 로고    scopus 로고
    • Golden jubilee of the DNA double helix
    • DOI 10.1016/S0167-7799(03)00031-3
    • V.V. Demidov Golden jubilee of the DNA double helix Trends Biotechnol. 21 2003 139 140 (Pubitemid 36397975)
    • (2003) Trends in Biotechnology , vol.21 , Issue.4 , pp. 139-140
    • Demidov, V.V.1
  • 6
    • 0026726475 scopus 로고
    • Synthesis and sequence-specific DNA binding of a topoisomerase inhibitory analog of Hoechst 33258 designed for altered base and sequence recognition
    • M.P. Singh, T. Joseph, S. Kumar, Y. Bathini, and J.W. Lown Synthesis and sequence-specific DNA binding of a topoisomerase inhibitory analog of Hoechst 33258 designed for altered base and sequence recognition Chem. Res. Toxicol. 5 1992 597 607
    • (1992) Chem. Res. Toxicol. , vol.5 , pp. 597-607
    • Singh, M.P.1    Joseph, T.2    Kumar, S.3    Bathini, Y.4    Lown, J.W.5
  • 7
    • 0014202608 scopus 로고
    • A fluorescent complex between ethidium bromide and nucleic acids
    • J.B. Le Pecq, and C. Paoletti A fluorescent complex between ethidium bromide and nucleic acids J. Mol. Biol. 27 1967 87 106
    • (1967) J. Mol. Biol. , vol.27 , pp. 87-106
    • Le Pecq, J.B.1    Paoletti, C.2
  • 8
    • 0037370422 scopus 로고    scopus 로고
    • Competitive interactions of adriamycin and ethidium bromide with DNA as studied by full rank parallel factor analysis of fluorescence three-way array data
    • H.P. Xie, X. Chu, J.H. Jiang, H. Cui, G.L. Shen, and R.Q. Yu Competitive interactions of adriamycin and ethidium bromide with DNA as studied by full rank parallel factor analysis of fluorescence three-way array data Spectrochim. Acta A 59 2003 743 749
    • (2003) Spectrochim. Acta A , vol.59 , pp. 743-749
    • Xie, H.P.1    Chu, X.2    Jiang, J.H.3    Cui, H.4    Shen, G.L.5    Yu, R.Q.6
  • 9
    • 33746253976 scopus 로고    scopus 로고
    • Location of High and Low Affinity Fatty Acid Binding Sites on Human Serum Albumin Revealed by NMR Drug-competition Analysis
    • DOI 10.1016/j.jmb.2006.06.028, PII S0022283606007509
    • J.R. Simard, P.A. Zunszain, J.A. Hamilton, and S. Curry Location of high and low affinity fatty acid binding sites on human serum albumin revealed by NMR drug-competition analysis J. Mol. Biol. 361 2006 336 351 (Pubitemid 44092787)
    • (2006) Journal of Molecular Biology , vol.361 , Issue.2 , pp. 336-351
    • Simard, J.R.1    Zunszain, P.A.2    Hamilton, J.A.3    Curry, S.4
  • 10
    • 29344442356 scopus 로고    scopus 로고
    • 2+ - Enantiopreferential DNA binding and co-ligand promoted exciton coupling
    • DOI 10.1016/j.jinorgbio.2005.09.008, PII S0162013405002710
    • P. Uma Maheswar, V. Rajendiran, M. Palaniandavar, R. Parthasarathi, and V. Subramanian Synthesis, characterization and DNA binding properties of rac-[Ru(5,6-dmp)(2)(dppz)](2+)-Enantiopreferential DNA binding and co-ligand promoted exciton coupling J. Inorg. Biochem. 100 2006 3 17 (Pubitemid 43005015)
    • (2006) Journal of Inorganic Biochemistry , vol.100 , Issue.1 , pp. 3-17
    • Maheswari, P.U.1    Rajendiran, V.2    Palaniandavar, M.3    Parthasarathi, R.4    Subramanian, V.5
  • 11
    • 0035974965 scopus 로고    scopus 로고
    • A spectrophotometric study on the interaction of neutral red with double-stranded DNA in large excess
    • DOI 10.1016/S0039-9140(01)00428-3, PII S0039914001004283
    • C.Z. Huang, Y.F. Li, and P. Feng A spectrophotometric study on the interaction of neutral red with double-stranded DNA in large excess Talanta 55 2001 321 328 (Pubitemid 32756724)
    • (2001) Talanta , vol.55 , Issue.2 , pp. 321-328
    • Huang, C.Z.1    Li, Y.F.2    Feng, P.3
  • 12
    • 0141792402 scopus 로고    scopus 로고
    • Metal ion binding in the active site of the junction-resolving enzyme T7 endonuclease I in the presence and in the absence of DNA
    • DOI 10.1016/j.jmb.2003.08.010
    • A.D.J. Freeman, A.C. Declais, and D.M.J. Lilley Metal ion binding in the active site of the junction-resolving enzyme T7 endonuclease I in the presence and in the absence of DNA J. Mol. Biol. 333 2003 59 73 (Pubitemid 37153265)
    • (2003) Journal of Molecular Biology , vol.333 , Issue.1 , pp. 59-73
    • Freeman, A.D.J.1    Declais, A.-C.2    Lilley, D.M.J.3
  • 13
    • 1042266349 scopus 로고    scopus 로고
    • Spectral characterization, X-ray structure and biological investigations of copper (II) ternary complexes of 2-hydroxyacetophenone 4-hydroxybenzoic acid hydrazone and heterocyclic bases
    • P.B. Sreeja, M.R. Prathapachandra Kurup, A. Kishore, and C. Jasmin Spectral characterization, X-ray structure and biological investigations of copper (II) ternary complexes of 2-hydroxyacetophenone 4-hydroxybenzoic acid hydrazone and heterocyclic bases Polyhedron 23 2004 575 581
    • (2004) Polyhedron , vol.23 , pp. 575-581
    • Sreeja, P.B.1    Prathapachandra Kurup, M.R.2    Kishore, A.3    Jasmin, C.4
  • 15
    • 0032872224 scopus 로고    scopus 로고
    • Natural and synthetic double-stranded DNA binding studies of macrocyclic tetraamine zinc(II) complexes appended with polyaromatic groups
    • DOI 10.1007/s007750050329
    • E. Kikuta, N. Katsube, and E. Kimura Natural and synthetic double-stranded DNA binding studies of macrocyclic tetraamine zinc(II) complexes appended with polyaromatic groups J. Biol. Inorg. Chem. 4 1999 431 440 (Pubitemid 29426300)
    • (1999) Journal of Biological Inorganic Chemistry , vol.4 , Issue.4 , pp. 431-440
    • Kikuta, E.1    Katsube, N.2    Kimura, E.3
  • 16
    • 33747189237 scopus 로고    scopus 로고
    • Simultaneous analysis of the photocatalytic degradation of polycyclic aromatic hydrocarbons using three-dimensional excitation-emission matrix fluorescence and parallel factor analysis
    • DOI 10.1016/j.aca.2006.06.005, PII S0003267006012311
    • M.V. Bosco, M.P. Callao, and M.S. Larrechi Simultaneous analysis of the photocatalytic degradation of polycyclic aromatic hydrocarbons using three-dimensional excitation-emission matrix fluorescence and parallel factor analysis Anal. Chim. Acta 576 2006 184 191 (Pubitemid 44226457)
    • (2006) Analytica Chimica Acta , vol.576 , Issue.2 , pp. 184-191
    • Bosco, M.V.1    Callao, M.P.2    Larrechi, M.S.3
  • 17
    • 20444461265 scopus 로고    scopus 로고
    • The maintenance of a PARAFAC calibration and the second-order property: Application to the determination of ciprofloxacin in presence of enrofloxacin by excitation-emission fluorescence
    • DOI 10.1016/j.aca.2004.11.076, PII S0003267004016307
    • D. Gimenez, L. Sarabia, and M.C. Ortiz The maintenance of a PARAFAC calibration and the second-order property: application to the determination of ciprofloxacin in presence of enrofloxacin by excitation-emission fluorescence Anal. Chim. Acta 544 2005 327 336 (Pubitemid 40814172)
    • (2005) Analytica Chimica Acta , vol.544 , Issue.1-2 SPEC. ISS. , pp. 327-336
    • Gimenez, D.1    Sarabia, L.2    Ortiz, M.C.3
  • 18
    • 12344268737 scopus 로고    scopus 로고
    • Three- and four-way parallel factor (PARAFAC) analysis of photochemically induced excitation-emission kinetic fluorescence spectra
    • DOI 10.1039/b409235j
    • M.L. Nahorniak, G.A. Cooper, Y.C. Kim, and K.S. Booksh Three- and four-way parallel factor (PARAFAC) analysis of photochemically induced excitation-emission kinetic fluorescence spectra Analyst 130 2005 85 93 (Pubitemid 40129146)
    • (2005) Analyst , vol.130 , Issue.1 , pp. 85-93
    • Nahorniak, M.L.1    Cooper, G.A.2    Kim, Y.-C.3    Booksh, K.S.4
  • 19
    • 37649003240 scopus 로고    scopus 로고
    • Solving matrix effects exploiting the second-order advantage in the resolution and determination of eight tetracycline antibiotics in effluent wastewater by modeling liquid chromatography data with multivariate curve resolution-alternating least squares and unfolded-partial least squares followed by residual bilinearization algorithms II. Prediction and figures of merit
    • M.D. Gil Garcia, M.J. Culzoni, M.M. De Zan, R.S. Valverde, M.M. Galera, and H.C. Goicoechea Solving matrix effects exploiting the second-order advantage in the resolution and determination of eight tetracycline antibiotics in effluent wastewater by modeling liquid chromatography data with multivariate curve resolution-alternating least squares and unfolded-partial least squares followed by residual bilinearization algorithms II. Prediction and figures of merit J. Chromatogr. A 1179 2008 115 124
    • (2008) J. Chromatogr. A , vol.1179 , pp. 115-124
    • Gil Garcia, M.D.1    Culzoni, M.J.2    De Zan, M.M.3    Valverde, R.S.4    Galera, M.M.5    Goicoechea, H.C.6
  • 21
    • 0030785112 scopus 로고    scopus 로고
    • A soft-modeling approach to interpret thermodynamic and conformational transitions of polynucleotides
    • A. de Juan, A. Izquierdo-Ridorsa, R. Tauler, G. Fonrodona, and E. Casassas A soft-modeling approach to interpret thermodynamic and conformational transitions of polynucleotides Biophys. J. 73 1997 2937 2948 (Pubitemid 27525760)
    • (1997) Biophysical Journal , vol.73 , Issue.6 , pp. 2937-2948
    • De Juan, A.1    Izquierdo-Ridorsa, A.2    Tauler, R.3    Fonrodona, G.4    Casassas, E.5
  • 23
    • 18944397868 scopus 로고
    • Theory of analytical chemistry
    • K.S. Booksh, and B.R. Kowalski Theory of analytical chemistry Anal. Chem. 66 1994 782 791
    • (1994) Anal. Chem. , vol.66 , pp. 782-791
    • Booksh, K.S.1    Kowalski, B.R.2
  • 24
    • 36749018022 scopus 로고    scopus 로고
    • Synchronous fluorescence and UV-vis spectroscopic studies of interactions between the tetracycline antibiotic, aluminium ions and DNA with the aid of the Methylene Blue dye probe
    • DOI 10.1016/j.aca.2007.10.051, PII S0003267007018259
    • Y.N. Ni, D.Q. Lin, and S. Kokot Synchronous fluorescence and UV-vis spectroscopic studies of interactions between the tetracycline antibiotic, aluminium ions and DNA with the aid of the Methylene Blue dye probe Anal. Chim. Acta 606 2008 19 25 (Pubitemid 350212838)
    • (2008) Analytica Chimica Acta , vol.606 , Issue.1 , pp. 19-25
    • Ni, Y.1    Lin, D.2    Kokot, S.3
  • 25
    • 0004203842 scopus 로고
    • Chinese University of Science and Technology Press Hefei
    • Z.Y. Chen, J. Liu, and D. Luo Biochemistry Experiments 1994 Chinese University of Science and Technology Press Hefei p. 111 (in Chinese)
    • (1994) Biochemistry Experiments
    • Chen, Z.Y.1    Liu, J.2    Luo, D.3
  • 26
    • 33947455249 scopus 로고
    • A further examination of the molecular weight and size of deoxypentose nucleic acid
    • M.E. Reichmann, S.A. Rice, C.A. Thomas, and P. Doty A further examination of the molecular weight and size of deoxypentose nucleic acid J. Am. Chem. Soc. 76 1954 3047 3053
    • (1954) J. Am. Chem. Soc. , vol.76 , pp. 3047-3053
    • Reichmann, M.E.1    Rice, S.A.2    Thomas, C.A.3    Doty, P.4
  • 27
    • 0004236492 scopus 로고    scopus 로고
    • 3rd ed. Johns Hopkins University Press Baltimore, MD
    • G.H. Golub, and C.F. van Loan Matrix Computation 3rd ed. 1996 Johns Hopkins University Press Baltimore, MD
    • (1996) Matrix Computation
    • Golub, G.H.1    Van Loan, C.F.2
  • 28
    • 84984342002 scopus 로고
    • Selectivity, local rank, three-way data analysis and ambiguity in multivariate curve resolution
    • R. Tauler, A.K. Smilde, and B.R. Kowalski Selectivity, local rank, three-way data analysis and ambiguity in multivariate curve resolution J. Chemom. 9 1995 31 58
    • (1995) J. Chemom. , vol.9 , pp. 31-58
    • Tauler, R.1    Smilde, A.K.2    Kowalski, B.R.3
  • 29
    • 4243948752 scopus 로고
    • Interactive self-modeling mixture analysis
    • W. Windig, and J. Guilment Interactive self-modeling mixture analysis Anal. Chem. 63 1991 1425 1432
    • (1991) Anal. Chem. , vol.63 , pp. 1425-1432
    • Windig, W.1    Guilment, J.2
  • 30
    • 0001129840 scopus 로고
    • Multivariate curve resolution applied to spectral data from multiple runs of an industrial process
    • R. Tauler, B.R. Kowalski, and S. Flemming Multivariate curve resolution applied to spectral data from multiple runs of an industrial process Anal. Chem. 65 1993 2040 2047
    • (1993) Anal. Chem. , vol.65 , pp. 2040-2047
    • Tauler, R.1    Kowalski, B.R.2    Flemming, S.3
  • 31
    • 0345276681 scopus 로고    scopus 로고
    • Chemometrics applied to unravel multicomponent processes and mixtures: Revisiting latest trends in multivariate resolution
    • DOI 10.1016/S0003-2670(03)00724-4
    • A. de Juan, and R. Tauler Chemometrics applied to unravel multicomponent processes and mixtures. Revisiting latest trends in multivariate resolution Anal. Chim. Acta 500 2003 195 210 (Pubitemid 37487780)
    • (2003) Analytica Chimica Acta , vol.500 , Issue.1-2 , pp. 195-210
    • De Juan, A.1    Tauler, R.2
  • 33
    • 0038218259 scopus 로고    scopus 로고
    • Practical aspects of PARAFAC modeling of fluorescence excitation-emission data
    • C.M. Andersen, and R. Bro Practical aspects of PARAFAC modeling of fluorescence excitation-emission data J. Chemom. 17 2003 200 215
    • (2003) J. Chemom. , vol.17 , pp. 200-215
    • Andersen, C.M.1    Bro, R.2
  • 34
    • 0030813663 scopus 로고    scopus 로고
    • PARAFAC. Tutorial and applications
    • DOI 10.1016/S0169-7439(97)00032-4, PII S0169743997000324
    • R. Bro PARAFAC. Tutorial and applications Chemom. Intell. Lab. Syst. 38 1997 149 171 (Pubitemid 27512492)
    • (1997) Chemometrics and Intelligent Laboratory Systems , vol.38 , Issue.2 , pp. 149-171
    • Bro, R.1
  • 35
    • 85048645035 scopus 로고
    • Structural considerations in the interaction of DNA and acridines
    • L.S. Lerman Structural considerations in the interaction of DNA and acridines J. Mol. Biol. 3 1961 18 30
    • (1961) J. Mol. Biol. , vol.3 , pp. 18-30
    • Lerman, L.S.1
  • 36
    • 56049092016 scopus 로고    scopus 로고
    • Spectrometric and voltammetric studies of the interaction between quercetin and bovine serum albumin using warfarin as site marker with the aid of chemometrics
    • Y.N. Ni, X. Zhang, and S. Kokot Spectrometric and voltammetric studies of the interaction between quercetin and bovine serum albumin using warfarin as site marker with the aid of chemometrics Spectrochim. Acta A 71 2009 1865 1872
    • (2009) Spectrochim. Acta A , vol.71 , pp. 1865-1872
    • Ni, Y.N.1    Zhang, X.2    Kokot, S.3
  • 37
    • 44049104200 scopus 로고    scopus 로고
    • High throughput screening arrays of rhodium and iridium complexes as catalysts for intramolecular hydroamination using parallel factor analysis
    • DOI 10.1039/b719501j
    • D. Ebrahimi, D.F. Kennedy, B.A. Messerle, and D.B. Hibbert High throughput screening arrays of rhodium and iridium complexes as catalysts for intramolecular hydroamination using parallel factor analysis Analyst 133 2008 817 822 (Pubitemid 351713332)
    • (2008) Analyst , vol.133 , Issue.6 , pp. 817-822
    • Ebrahimi, D.1    Kennedy, D.F.2    Messerle, B.A.3    Hibbert, D.B.4
  • 39
    • 0013793175 scopus 로고
    • Complex formation between ethidium bromide and nucleic acids
    • M.J. Waring Complex formation between ethidium bromide and nucleic acids J. Mol. Biol. 13 1965 269 282
    • (1965) J. Mol. Biol. , vol.13 , pp. 269-282
    • Waring, M.J.1
  • 40
    • 0033599521 scopus 로고    scopus 로고
    • Contrasting hydration changes for ethidium and daunomycin binding to DNA [27]
    • DOI 10.1021/ja984366b
    • X. Qu, and J.B. Chaires Contrasting hydration changes for ethidium and daunomycin binding to DNA J. Am. Chem. Soc. 121 1999 2649 2650 (Pubitemid 29153498)
    • (1999) Journal of the American Chemical Society , vol.121 , Issue.11 , pp. 2649-2650
    • Qu, X.1    Chaires, J.B.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.