Characterization of dissolved organic matter (DOM) from glacial environments using total fluorescence spectroscopy and parallel factor analysis

Annals of Glaciology

Volumn 51, Issue 56, 2010, Pages 111-122

  Dubnick, Ashley ^a   Barker, Joel ^b   Sharp, Martin ^a   Wadham, Jemma ^c   Grzegorz, Lis ^c   Telling, Jon ^c   Fitzsimons, Sean ^d   Jackson, Miriam ^e  

^a UNIVERSITY OF ALBERTA   (Canada)

^b OHIO STATE UNIVERSITY   (United States)

^c UNIVERSITY OF BRISTOL   (United Kingdom)

^d UNIVERSITY OF OTAGO   (New Zealand)

^e NORWEGIAN WATER RESOURCES AND ENERGY DIRECTORATE   (Norway)

Author keywords

[No Author keywords available]

Indexed keywords

CLUSTER ANALYSIS; DISSOLVED ORGANIC MATTER; FACTOR ANALYSIS; FLUORESCENCE SPECTROSCOPY; GLACIER; MELTWATER; PROGLACIAL ENVIRONMENT; SUBGLACIAL ENVIRONMENT;

ANTARCTICA; ARCTIC; NORWAY;

EID: 79957846823     PISSN: 02603055     EISSN: None     Source Type: Journal    
DOI: 10.3189/172756411795931912     Document Type: Article

References (74)

1. Airado-Rodríguez, D., T. Galeano-Díaz, I. Durán-Merás and J.P. Wold. 2009. Usefulness of fluorescence excitation-emission matrices in combination with PARAFAC, as fingerprints of red wines. J. Agric Food Chem., 57(5), 1711-1720.
2. Andersen, C.M. and R. Bro. 2003. Practical aspects of PARAFAC modeling of fluorescence excitation-emission data. J. Chemometr., 17(4), 200-215.
3. Andersson, C.A. and R. Bro. 2000. The N-way Toolbox for MATLAB. Chem. Intell. Lab. Syst., 52(1), 1-4. (Pubitemid 30621552)
4. Anesio, A.M., A.J. Hodson, A. Fritz, R. Psennerand B. Sattler. 2009. High microbial activity on glaciers: importance to the global carbon cycle. Global Change Biol., 15(4), 955-960.
5. Banaitis, M.R. and 6 others. 2006. Investigating sorption-driven dissolved organic matter fractionation by multidimensional fluorescence spectroscopy and PARAFAC J. Colloid Interface Sci., 304(1), 271-276. (Pubitemid 44602092)
6. Barker, J.D. 2007. An investigation of the abundance and molecular characteristics of organic matter in glacier systems. (PhD thesis, University of Alberta.)
7. Barker, J.D., M.J. Sharp, S.J. Fitzsimons and R.J. Turner. 2006. Abundance and dynamics of dissolved organic carbon in glacier systems. Arcf. Antarct. Alp. Res., 38(2), 163-172. (Pubitemid 43793400)
8. Barker, J.D., M.J. Sharp and R.J. Turner. 2009. Using synchronous fluorescence spectroscopy and principal components analysis to monitor dissolved organic matter dynamics in a glacier system. Hydrol. Process., 23(10), 1487-1500.
9. Bertilsson, S. and J.B. Jones. 2003. Supply of dissolved organic matter to aquatic ecosystems: autochthonous sources. In Findlay, S.E.G. and R.L. Sinsabaugh, eds. Aquatic ecosystems: interactivity of dissolved organic matter (aquatic ecology). San Diego, CA, Academic Press, 3-24.
10. Bhatia, M., M. Sharp and J. Foght. 2006. Distinct bacterial communities exist beneath a High Arctic polythermal glacier. Appl. Environ. Microbiol., 72(9), 5838-5845. (Pubitemid 44414609)
11. Bhatia, M.P., S.B. Das, K. Longnecker, M.A. Charette and E.B. Kujawinski. 2010. Molecular characterization of dissolved organic matter associated with the Greenland ice sheet. Ceochim. Cosmochim. Acta, 74(13), 3768-3784.
12. Bro, R. 1997. PARAFAC Tutorial and applications. Chem. Intell. Lab. Syst., 38(2), 149-171.
13. Bro, R. 1999. Exploratory study of sugar production using fluorescence spectroscopy and multi-way analysis. Chem. Intell. Lab. Syst., 46(2), 133-147. (Pubitemid 29098981)
14. Carpenter, E.J., S. Lin and D.G. Capone. 2000. Bacterial activity in South Pole snow. Appl. Environ. Microbiol., 66(10), 4514-4517.
15. Chen, W., P. Westerhoff, J.A. Leenheer and K. Booksh. 2003. Fluorescence excitation-emission matrix regional integration to quantify spectra for dissolved organic matter. Environ. Sci. Technol., 37(24), 5701-5710. (Pubitemid 37547932)
16. Christensen, J., E. Miquel Becker and C.S. Frederiksen. 2005. Fluorescence spectroscopy and PARAFAC in the analysis of yogurt. Chem. Intell. Lab. Syst., 75(2), 201-208. (Pubitemid 40164343)
17. Coble, P.G. 1996. Characterization of marine and terrestrial DOM in seawater using excitation-emission matrix spectroscopy. Mar. Chem., 51(4), 325-346.
18. Coble, P.G. 2007. Marine optical biogeochemistry: the chemistry of ocean color. Chem. Rev, 107(2), 402-418. (Pubitemid 46381027)
19. Coble, P.G., S.A. Green, N.V. Blough and R.B. Gagosian. 1990. Characterization of dissolved organic matter in the Black Sea by fluorescence spectroscopy. Nature, 348(6300), 432-435. (Pubitemid 120015080)
20. Coble, P.G., C.E. Del Castillo and B. Avril. 1998. Distribution and optical properties of CDOM in the Arabian Sea during the 1995 Southwest Monsoon. Deep-Sea Res. II, 45(10-11), 2195-2223. (Pubitemid 29006863)
21. De Souza Sierra, M.M., O.F.X. Donard, M. Lamotte, C. Belin and M. Ewald. 1994. Fluorescence spectroscopy of coastal and marine waters. Mar. Chem., 47(2), 127-144. (Pubitemid 2151722)
22. Determann, S., J.M. Lobbes, R. Reuter and J. Rullkötter. 1998. Ultraviolet fluorescence excitation and emission spectroscopy of marine algae and bacteria. Mar. Chem., 62(1-2), 137-156. (Pubitemid 28360301)
23. Fellman, J.B., D.V. D'Amore, E. Hood and R.D. Boone. 2008. Fluorescence characteristics and biodegradability of dissolved organic matter in forest and wetland soils from coastal temperate watersheds in southeast Alaska. Biogeochem., 88(2), 169-184.
24. Findlay, S.E.G. and R.L. Sinsabaugh. 2003. Aquatic ecosystems: interactivity of dissolved organic matter. San Diego, CA, Academic Press.
25. Foght, J. and 6 others. 2004. Culturable bacteria in subglacial sediments and ice from two Southern Hemisphere glaciers. Microbial Ecol., 47(4), 329-340. (Pubitemid 38889593)
26. Foreman, C.M., B. Sattler, D.L. Mikucki, D.L. Porazinska and J.C. Priscu. 2007. Metabolic activity and diversity of cryoconites in the Taylor Valley, Antarctica. J. Geophys. Res., 112(G4), G04S32. (10.1029/2006JG000358.)
27. Hall, B.L., C.H. Denton and B. Overturf. 2001. Glacial Lake Wright, a high-level Antarctic lake during the LGM and early Holocene. Antarct. Sci., 13(1), 53-60. (Pubitemid 32241489)
28. Harshman, R.A. and M.E. Lundy. 1984. The PARAFAC model for three-way factor analysis and multidimensional scaling. In Law, H.G., C.W. Snyder, Jr, J.A. Hattie and R.P. McDonald, eds. Research methods for multimode data analysis. New York, Praeger, 122-215.
29. Hautala, K., J. Peuravuori and K. Pihlaja. 2000. Measurement of aquatic humus content by spectroscopic analyses. Water Res., 34(1), 246-258. (Pubitemid 32262227)
30. Holbrook, R.D., J.H. Yen and T.J. Grizzard. 2006. Characterizing natural organic material from the Occoquan Watershed (Northern Virginia, US) using fluorescence spectroscopy and PARAFAC Sci. Total Environ., 361(1-3), 249-266. (Pubitemid 44275156)
31. Hood, E. and 6 others. 2009. Glaciers as a source of ancient and labile organic matter to the marine environment. Nature, 462(7276), 1044-1047.
32. Hudson, N., A. Baker and D. Reynolds. 2007. Fluorescence analysis of dissolved organic matter in natural, waste and polluted waters - a review. River Res. Appl., 23(6), 631-649. (Pubitemid 47233108)
33. Knight, P.G. 1997. The basal ice layer of glaciers and ice sheets. Quaf. Sci. Rev, 16(9), 975-993. (Pubitemid 28102266)
34. Kowalczuk, P., J. Stoé-Egiert, W.J. Cooper, R.F. Whitehead and MJ. Durako. 2005. Characterization of chromophoric dissolved organic matter (CDOM) in the Baltic Sea by excitation emission matrix fluorescence spectroscopy. Mar. Chem., 96(3-4), 273-292. (Pubitemid 41074852)
35. Lafrenière, M.J. and M.J. Sharp. 2004. The concentration and fluorescence of dissolved organic carbon (DOC) in glacial and nonglacial catchments: interpreting hydrological flow routing and DOC sources. Arct. Antarct. Alp. Res., 36(2), 156-165. (Pubitemid 39588555)
36. Lakowicz, J.R. 1999. Principles of fluorescence spectroscopy. Second edition. New York, Springer.
37. Lanoil, B. and 7 others. 2009. Bacteria beneath the West Antarctic Ice Sheet. Environ. Microbiol., 11(3), 609-615.
38. Lappegard, G., J. Kohler, M. Jackson and J.O. Hagen. 2006. Characteristics of subglacial drainage systems deduced from load-cell measurements.;. Claciol., 52(176), 137-148. (Pubitemid 43821423)
39. Leenheer, J.A. and J.-P. Croué. 2003. Characterizing aquatic dissolved organic matter. Environ. Sci. Technol., 37(1), 18A-26A. (Pubitemid 36043489)
40. Luciani, X. and 8 others. 2008. Tracing of dissolved organic matter from the SEPETIBA Bay (Brazil) by PARAFAC analysis of total luminescence matrices. Mar. Environ. Res., 65(2), 148-157. (Pubitemid 351178767)
41. Maie, N., N.M. Scully, O. Pisani and R. jaffé. 2007. Composition of a protein-like fluorophore of dissolved organic matter in coastal wetland and estuarine ecosystems. Water Res., 41(3), 563-570. (Pubitemid 46091642)
42. Marhaba, T.F. and R.L. Lippincott. 2000. Application of fluorescence technique for rapid identification of DOM fractions in source waters. ASCEJ. Environ. Eng., 126(11), 1039-1044.
43. Marhaba, T.F., D. Van and R.L. Lippincott. 2000. Rapid identification of dissolved organic matter fractions in water by spectral fluorescent signatures. Water Res., 34(14), 3543-3550. (Pubitemid 30488124)
44. Miller, M.P., D.M. McKnight and S.C Chapra. 2009. Production of microbially-derived fulvic acid from photolysis of quinonecontaining extracellular products of phytoplankton. Aquat. Sci., 71(2), 170-178.
45. Mobed, J.J., S.L. Hemmingsen, J.L. Autry and L.B. McGown. 1996. Fluorescence characterization of IHSS humic substances: total luminescence spectra with absorbance correction. Environ. Sci. Technol., 30(10), 3061-3065. (Pubitemid 26332664)
46. Mopper, K. and C.A. Schultz. 1993. Fluorescence as a possible tool for studying the nature and water column distribution of DOC components. Mar. Chem., 41(1-3), 229-238.
47. Mopper, K., Z. Feng, S.B. Bentjen and R.F. Chen. 1996. Effects of cross-flow filtration on the absorption and fluorescence properties of seawater. Mar. Chem., 55(1-2), 53-74. (Pubitemid 27025146)
48. Mulholland, P.J. 2003. Large-scale patterns in dissolved organic carbon concentration, flux, and sources. In Findlay, S.E.G. and R.L. Sinsabaugh, eds. Aquatic ecosystems: interactivity of dissolved organic matter. San Diego, CA, Academic Press.
49. Murphy, K.R., C.A. Stedmon, T.D. Waite and C.M. Ruiz. 2008. Distinguishing between terrestrial and autochthonous organic matter sources in marine environments using fluorescence spectroscopy. Mar. Chem., 108(1-2), 40-58. (Pubitemid 350302039)
50. Ohno, T. and R. Bro. 2006. Dissolved organic matter characterization using multiway spectral decomposition of fluorescence landscapes. Soil Sci. Soc. Am. J., 70(6), 2028-2037. (Pubitemid 44764701)
51. Parlanti, E., K. Wortz, L. Geoffroy and M. Lamotte. 2000. Dissolved organic matter fluorescence spectroscopy as a tool to estimate biological activity in a coastal zone submitted to anthropogenic inputs. Org. Geochem., 31(12), 1765-1781.
52. Price, P.B. 2000. A habitat for psychrophiles in deep Antarctic ice. Proc Natl Acad. Sci. USA (PNAS), 97(3), 1247-1251. (Pubitemid 30080844)
53. Priscu, J.C. and 11 others. 1999. Geomicrobiology of subglacial ice above Lake Vostok, Antarctica. Science, 286(5447), 2141-2144. (Pubitemid 129516285)
54. Priscu, J.C, B.C. Christner, C.M. Foreman and G. Royston-Bishop. 2006. Biological material in ice cores. In Elias, S.A., ed Encyclopedia of Quaternary Sciences, Vol. 2. Amsterdam, Elsevier, 1156-1166.
55. Rutledge, D.N. and D.J.R. Bouveresse. 2007. Multi-way analysis of outer product arrays using PARAFAC Chem. Intell. Lab. Syst., 85(2), 170-178. (Pubitemid 46329192)
56. Sharma, A. and S.G. Schulman. 1999. Introduction to fluorescence spectroscopy. New York, Wiley.
57. Sharp, M., J. Parkes, B. Cragg, I.J. Fairchild, H. Lamb and M. Tranter. 1999. Widespread bacterial populations at glacier beds and their relationship to rock weathering and carbon cycling. Geology, 27(2), 107-110. (Pubitemid 29285774)
58. Skidmore, M.L., J.M. Foght and M.J. Sharp. 2000. Microbial life beneath a high Arctic glacier. Appl. Environ. Microbiol., 66(8), 3214-3220. (Pubitemid 30624560)
59. Skidmore, M., S.P. Anderson, M. Sharp, J. Foght and B.D. Lanoil. 2005. Comparison of microbial community compositions of two subglacial environments reveals a possible role for microbes in chemical weathering processes. Appl. Environ. Microbiol., 71(11), 6986-6997. (Pubitemid 43194189)
60. Sleewaegen, S., D. Samyn, S.J. Fitzsimons and R.D. Lorrain. 2003. Equifinality of basal ice facies from an Antarctic cold-based glacier. Ann. Claciol., 37, 257-262. (Pubitemid 38272549)
61. Sleighter, R.L. and P.G. Hatcher. 2008. Molecular characterization of dissolved organic matter (DOM) along a river to ocean transect of the lower Chesapeake Bay by ultrahigh resolution electrospray ionization Fourier transform ion cyclotron resonance mass spectrometry. Mar. Chem., 110(3-4), 140-152.
62. Smilde, A., R. Bro and P. Geladi. 2004. Multi-way analysis: applications in the chemical sciences. Chichester, Wiley.
63. 18O of water and ice during freezing. J. Claciol., 30(106), 369-372.
64. Spencer, R.G.M., L. Bolton and A. Baker. 2007. Freeze/thaw and pH effects on freshwater dissolved organic matter fluorescence and absorbance properties from a number of UK locations. Water Res., 41(13), 2941-2950. (Pubitemid 46894707)
65. Stedmon, C.A. and R. Bro. 2008. Characterizing dissolved organic matter fluorescence with parallel factor analysis: a tutorial. Limnol. Oceanogr. Meth., 6, 572-579.
66. Stedmon, C.A. and S. Markager. 2005a. Resolving the variability of dissolved organic matter fluorescence in a temperate estuary and its catchment using PARAFAC analysis. Limnol. Oceanogr., 50(2), 686-697. (Pubitemid 40428493)
67. Stedmon, C.A. and S. Markager. 2005b. Tracing the production and degradation of autochthonous fractions of dissolved organic matter using fluorescence analysis. Limnol. Oceanogr., 50(5), 1415-1426. (Pubitemid 41356423)
68. Stedmon, CA., S. Markager and R. Bro. 2003. Tracing dissolved organic matter in aquatic environments using a new approach to fluorescence spectroscopy. Mar. Chem., 82(3-4), 239-254. (Pubitemid 37029444)
69. Stibal, M., M. Šabacká and K. Kaštovská. 2006. Microbial communities on glacier surfaces in Svalbard: impact of physical and chemical properties on abundance and structure of cyanobacteria and algae. Microbial Ecol., 52(4), 644-654. (Pubitemid 44924002)
70. Stibal, M., M. Tranter, L.G. Benning and J. Řehák. 2008. Microbial primary production on an Arctic glacier is insignificant in comparison with allochthonous organic carbon input. Environ. Microbiol., 10(8), 2172-2178.
71. Wadham, J.L., S. Bottrell, M. Tranter and R. Raiswell. 2004. Stable isotope evidence for microbial sulphate reduction at the bed of a polythermal high Arctic glacier. Earth Planet. Sci. Lett., 219(3-4), 341-355. (Pubitemid 38335594)
72. Wadham, J.L., M. Tranter, S. Tulaczyk and M. Sharp. 2008. Subglacial methanogenesis: a potential climatic amplifier? Global Biogeochem. Cycles, 22(2), GB2021. (10.1029/ 2007GB002951.)
73. Willerslev, E. and 29 others. 2007. Ancient biomolecules from deep ice cores reveal a forested southern Greenland. Science, 317(5834), 111-114. (Pubitemid 47056466)
74. Yamashita, Y., R. Jaffa, N. Maie and E. Tanoue. 2008. Assessing the dynamics of dissolved organic matter (DOM) in coastal environments by excitation emission matrix fluorescence and parallel factor analysis (EEM-PARAFAC). Limnol. Oceanogr., 53(5), 1900-1908.