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Volumn 13, Issue 7, 2011, Pages 709-719

In silico prediction of binding of promiscuous peptides to multiple MHC class-II molecules identifies the Th1 cell epitopes from secreted and transmembrane proteins of Schistosoma japonicum in BALB/c mice

Author keywords

Immunogenicity; In silico prediction; Promiscuous Th epitope; Schistosoma japonicum; Secreted and transmembrane proteins

Indexed keywords

3 (4,5 DIMETHYL 2 THIAZOLYL) 2,5 DIPHENYLTETRAZOLIUM BROMIDE; EPITOPE; MAJOR HISTOCOMPATIBILITY ANTIGEN CLASS 2; MEMBRANE PROTEIN; TRANSCRIPTOME;

EID: 79957754767     PISSN: 12864579     EISSN: 1769714X     Source Type: Journal    
DOI: 10.1016/j.micinf.2011.03.005     Document Type: Article
Times cited : (19)

References (49)
  • 1
    • 70449346380 scopus 로고    scopus 로고
    • Schistosomiasis and neglected tropical diseases: towards integrated and sustainable control and a word of caution
    • Utzinger J., Raso G., Brooker S., Savigny D.D., Tanner M., Ornbjerg N., Singer B.H., N'goran E.K. Schistosomiasis and neglected tropical diseases: towards integrated and sustainable control and a word of caution. Parasitol. 2009, 136:1859-1874.
    • (2009) Parasitol. , vol.136 , pp. 1859-1874
    • Utzinger, J.1    Raso, G.2    Brooker, S.3    Savigny, D.D.4    Tanner, M.5    Ornbjerg, N.6    Singer, B.H.7    N'goran, E.K.8
  • 4
    • 38549179418 scopus 로고    scopus 로고
    • Current status of vaccines for schistosomiasis
    • McManus D.P., Loukas A. Current status of vaccines for schistosomiasis. Clin. Microbiol. Rev. 2008, 21:225-242.
    • (2008) Clin. Microbiol. Rev. , vol.21 , pp. 225-242
    • McManus, D.P.1    Loukas, A.2
  • 5
    • 70350566623 scopus 로고    scopus 로고
    • Radiation-attenuated schistosome vaccination-a brief historical perspective
    • Bickle Q.D. Radiation-attenuated schistosome vaccination-a brief historical perspective. Parasitol. 2009, 136:1621-1632.
    • (2009) Parasitol. , vol.136 , pp. 1621-1632
    • Bickle, Q.D.1
  • 6
    • 69449105403 scopus 로고    scopus 로고
    • Immune effector mechanisms against schistosomiasis: looking for a chink in the parasite's armour
    • Wilson R.A., Coulson P.S. Immune effector mechanisms against schistosomiasis: looking for a chink in the parasite's armour. Trends Parasitol 2009, 25:423-431.
    • (2009) Trends Parasitol , vol.25 , pp. 423-431
    • Wilson, R.A.1    Coulson, P.S.2
  • 7
    • 0027418235 scopus 로고
    • Fractionation of schistosome antigens by high performance electrophoretic chromatography and their screening for the ability to induce Th1 lymphocyte activity
    • Mountford A.P., Wilson R.A. Fractionation of schistosome antigens by high performance electrophoretic chromatography and their screening for the ability to induce Th1 lymphocyte activity. J. Immunol. Methods 1993, 160:237-244.
    • (1993) J. Immunol. Methods , vol.160 , pp. 237-244
    • Mountford, A.P.1    Wilson, R.A.2
  • 8
    • 33646916258 scopus 로고    scopus 로고
    • Identification of novel proteases and immunomodulators in the secretions of schistosome cercariae that facilitate host entry
    • Curwen R.S., Ashton P.D., Sundaralingam S., Wilson R.A. Identification of novel proteases and immunomodulators in the secretions of schistosome cercariae that facilitate host entry. Mol. Cell. Proteomics 2006, 5:835-844.
    • (2006) Mol. Cell. Proteomics , vol.5 , pp. 835-844
    • Curwen, R.S.1    Ashton, P.D.2    Sundaralingam, S.3    Wilson, R.A.4
  • 9
    • 33646515340 scopus 로고    scopus 로고
    • Regulatory T-cell responses develop in parallel to Th responses and control the magnitude and phenotype of the Th effector population
    • Taylor J.J., Mohrs M., Pearce E.J. Regulatory T-cell responses develop in parallel to Th responses and control the magnitude and phenotype of the Th effector population. J. Immunol. 2006, 176:5839-5847.
    • (2006) J. Immunol. , vol.176 , pp. 5839-5847
    • Taylor, J.J.1    Mohrs, M.2    Pearce, E.J.3
  • 10
    • 0025232781 scopus 로고
    • Host-specific evasion of the alternative complement pathway by schistosomes correlates with the presence of a phospholipase C-sensitive surface molecule resembling human decay accelerating factor
    • Pearce E.J., Hall B.F., Sher A. Host-specific evasion of the alternative complement pathway by schistosomes correlates with the presence of a phospholipase C-sensitive surface molecule resembling human decay accelerating factor. J. Immunol. 1990, 144:2751-2756.
    • (1990) J. Immunol. , vol.144 , pp. 2751-2756
    • Pearce, E.J.1    Hall, B.F.2    Sher, A.3
  • 11
    • 44649181028 scopus 로고    scopus 로고
    • Molecular characterization of Schistosoma japonicum tegument protein tetraspanin-2: sequence variation and possible implications for immune evasion
    • Cai P.F., Bu L.Y., Wang J., Wang Z.S., Zhong X., Wang H. Molecular characterization of Schistosoma japonicum tegument protein tetraspanin-2: sequence variation and possible implications for immune evasion. Biochem. Biophys. Res. Commun. 2008, 372:197-202.
    • (2008) Biochem. Biophys. Res. Commun. , vol.372 , pp. 197-202
    • Cai, P.F.1    Bu, L.Y.2    Wang, J.3    Wang, Z.S.4    Zhong, X.5    Wang, H.6
  • 13
    • 0023191221 scopus 로고
    • HLA-DQ is epistatic to HLA-DR in controlling the immune response to schistosomal antigen in humans
    • Hirayama K., Matsushita S., Kikuchi I., Iuchi M., Ohta N., Sasazuki T. HLA-DQ is epistatic to HLA-DR in controlling the immune response to schistosomal antigen in humans. Nature 1987, 327:426-430.
    • (1987) Nature , vol.327 , pp. 426-430
    • Hirayama, K.1    Matsushita, S.2    Kikuchi, I.3    Iuchi, M.4    Ohta, N.5    Sasazuki, T.6
  • 14
    • 0032055345 scopus 로고    scopus 로고
    • HLA class II antigens are associated with resistance or susceptibility to hepatosplenic disease in a Chinese population infected with Schistosoma japonicum
    • Waine G.J., Ross A.G., Williams G.M., Sleigh A.C., McManus D.P. HLA class II antigens are associated with resistance or susceptibility to hepatosplenic disease in a Chinese population infected with Schistosoma japonicum. Int. J. Parasitol. 1998, 28:537-542.
    • (1998) Int. J. Parasitol. , vol.28 , pp. 537-542
    • Waine, G.J.1    Ross, A.G.2    Williams, G.M.3    Sleigh, A.C.4    McManus, D.P.5
  • 15
    • 0031818718 scopus 로고    scopus 로고
    • Mapping of specific and promiscuous HLA-DR-restricted T-cell epitopes on the Plasmodium falciparum 27-kilodalton sexual stage-specific antigen
    • Contreras C.E., Ploton I.N., Siliciano R.F., Karp C.L., Viscidi R., Kumar N. Mapping of specific and promiscuous HLA-DR-restricted T-cell epitopes on the Plasmodium falciparum 27-kilodalton sexual stage-specific antigen. Infect. Immun. 1998, 66:3579-3590.
    • (1998) Infect. Immun. , vol.66 , pp. 3579-3590
    • Contreras, C.E.1    Ploton, I.N.2    Siliciano, R.F.3    Karp, C.L.4    Viscidi, R.5    Kumar, N.6
  • 16
    • 33744950762 scopus 로고    scopus 로고
    • Major histocompatibility complex and T cell interactions of a universal T cell epitope from Plasmodium falciparum circumsporozoite protein
    • Parra-López C., Calvo-Calle J.M., Cameron T.O., Vargas L.E., Salazar L.M., Patarroyo M.E., Nardin E., Stern L.J. Major histocompatibility complex and T cell interactions of a universal T cell epitope from Plasmodium falciparum circumsporozoite protein. J. Biol. Chem. 2006, 281:14907-14917.
    • (2006) J. Biol. Chem. , vol.281 , pp. 14907-14917
    • Parra-López, C.1    Calvo-Calle, J.M.2    Cameron, T.O.3    Vargas, L.E.4    Salazar, L.M.5    Patarroyo, M.E.6    Nardin, E.7    Stern, L.J.8
  • 17
    • 0035164572 scopus 로고    scopus 로고
    • Human T- and B-cell responses to Schistosoma mansoni recombinant glyceraldehyde 3-phosphate dehydrogenase correlate with resistance to reinfection with S. mansoni or Schistosoma haematobium after chemotherapy
    • R.El. Ridi, C.B. Shoemaker, F. Farouk, N.H.El. Sherif, A. Afifi, Human T- and B-cell responses to Schistosoma mansoni recombinant glyceraldehyde 3-phosphate dehydrogenase correlate with resistance to reinfection with S. mansoni or Schistosoma haematobium after chemotherapy. Infect. Immun. 169(200) 237-244.
    • Infect. Immun. , vol.169 , Issue.200 , pp. 237-244
    • Ridi, R.E.L.1    Shoemaker, C.B.2    Farouk, F.3    Sherif, N.H.E.L.4    Afifi, A.5
  • 18
    • 0034775624 scopus 로고    scopus 로고
    • Human and murine humoral immune recognition of multiple peptides from Schistosoma mansoni glyceraldehyde 3-P dehydrogenase is associated with resistance to Schistosomiasis
    • Ridi R.El., Mahrous A., Afifi A., Montash M., Velek J., Jezek J. Human and murine humoral immune recognition of multiple peptides from Schistosoma mansoni glyceraldehyde 3-P dehydrogenase is associated with resistance to Schistosomiasis. Scand. J. Immunol. 2001, 54:477-485.
    • (2001) Scand. J. Immunol. , vol.54 , pp. 477-485
    • Ridi, R.1    Mahrous, A.2    Afifi, A.3    Montash, M.4    Velek, J.5    Jezek, J.6
  • 20
    • 0035925596 scopus 로고    scopus 로고
    • Reverse vaccinology, a genome-based approach to vaccine development
    • Rappuoli R. Reverse vaccinology, a genome-based approach to vaccine development. Vaccine 2001, 19:2688-2691.
    • (2001) Vaccine , vol.19 , pp. 2688-2691
    • Rappuoli, R.1
  • 22
    • 32444438223 scopus 로고    scopus 로고
    • ProPred analysis and experimental evaluation of promiscuous T-cell epitopes of three major secreted antigens of Mycobacterium tuberculosis
    • Mustafa A.S., Shaban F.A. ProPred analysis and experimental evaluation of promiscuous T-cell epitopes of three major secreted antigens of Mycobacterium tuberculosis. Tuberculosis 2006, 86:115-124.
    • (2006) Tuberculosis , vol.86 , pp. 115-124
    • Mustafa, A.S.1    Shaban, F.A.2
  • 23
    • 64749100632 scopus 로고    scopus 로고
    • An in silico immunological approach for prediction of CD8+ T cell epitopes of Leishmania major proteins in susceptible BALB/c and resistant C57BL/6 murine models of infection
    • Guerfali F.Z., Ben-Abdallah H., Sghaier R.M., Ben-Aissa K., Mkannez G., Attia H., Laouini D. An in silico immunological approach for prediction of CD8+ T cell epitopes of Leishmania major proteins in susceptible BALB/c and resistant C57BL/6 murine models of infection. Infect. Genet. Evol. 2009, 9:344-350.
    • (2009) Infect. Genet. Evol. , vol.9 , pp. 344-350
    • Guerfali, F.Z.1    Ben-Abdallah, H.2    Sghaier, R.M.3    Ben-Aissa, K.4    Mkannez, G.5    Attia, H.6    Laouini, D.7
  • 25
    • 67650786530 scopus 로고    scopus 로고
    • The Schistosoma japonicum genome reveals features of host-parasite interplay
    • Schistosoma japonicum Genome Sequencing and Functional Analysis Consortium
    • Schistosoma japonicum Genome Sequencing and Functional Analysis Consortium The Schistosoma japonicum genome reveals features of host-parasite interplay. Nature 2009, 460:345-351.
    • (2009) Nature , vol.460 , pp. 345-351
  • 29
    • 58149307468 scopus 로고    scopus 로고
    • ESLpred2 improved method for predicting subcellular localization of eukaryotic proteins
    • Garg A., Raghava G.P. ESLpred2 improved method for predicting subcellular localization of eukaryotic proteins. BMC Bioinformatics 2008, 9503.
    • (2008) BMC Bioinformatics , pp. 9503
    • Garg, A.1    Raghava, G.P.2
  • 30
    • 5444249860 scopus 로고    scopus 로고
    • Enhancement to the RANKPEP resource for the prediction of peptide binding to MHC molecules using profiles
    • Reche P.A., Glutting J.P., Zhang H., Reinherz E.L. Enhancement to the RANKPEP resource for the prediction of peptide binding to MHC molecules using profiles. Immunogenetics 2004, 56:405-419.
    • (2004) Immunogenetics , vol.56 , pp. 405-419
    • Reche, P.A.1    Glutting, J.P.2    Zhang, H.3    Reinherz, E.L.4
  • 31
    • 22144458334 scopus 로고    scopus 로고
    • PREDBALB/c: a system for the prediction of peptide binding to H2d molecules, a haplotype of the BALB/c mouse
    • Zhang G.L., Srinivasan K.N., Veeramani A., August J.T., Brusic V. PREDBALB/c: a system for the prediction of peptide binding to H2d molecules, a haplotype of the BALB/c mouse. Nucleic. Acids. Res. 2005, 33:W180-W183.
    • (2005) Nucleic. Acids. Res. , vol.33
    • Zhang, G.L.1    Srinivasan, K.N.2    Veeramani, A.3    August, J.T.4    Brusic, V.5
  • 32
    • 0041620259 scopus 로고    scopus 로고
    • MHCPred: a server for quantitative prediction of peptide-MHC binding
    • Guan P., Doytchinova I., Zygouri C., Flower D.R. MHCPred: a server for quantitative prediction of peptide-MHC binding. Nucleic Acids Res. 2003, 31:3621-3624.
    • (2003) Nucleic Acids Res. , vol.31 , pp. 3621-3624
    • Guan, P.1    Doytchinova, I.2    Zygouri, C.3    Flower, D.R.4
  • 34
    • 0036137241 scopus 로고    scopus 로고
    • ProPred: prediction of HLA-DR binding sites
    • Singh H., Raghava G.P.S. ProPred: prediction of HLA-DR binding sites. Bioinformatic 2001, 17:1236-1237.
    • (2001) Bioinformatic , vol.17 , pp. 1236-1237
    • Singh, H.1    Raghava, G.P.S.2
  • 36
    • 33846866453 scopus 로고    scopus 로고
    • Schistosome membrane proteins as vaccines
    • Loukas A., Tran M., Pearson M.S. Schistosome membrane proteins as vaccines. Int. J. Parasitol. 2007, 37:257-263.
    • (2007) Int. J. Parasitol. , vol.37 , pp. 257-263
    • Loukas, A.1    Tran, M.2    Pearson, M.S.3
  • 38
    • 0024505406 scopus 로고
    • Characterization of a large gene family in Schistosoma japonicum that encodes an immunogenic miracidial antigen
    • Scallon B.J., Bogitsh B.J., Carter C.E. Characterization of a large gene family in Schistosoma japonicum that encodes an immunogenic miracidial antigen. Mol. Biochem. Parasitol. 1989, 33:105-112.
    • (1989) Mol. Biochem. Parasitol. , vol.33 , pp. 105-112
    • Scallon, B.J.1    Bogitsh, B.J.2    Carter, C.E.3
  • 39
    • 0032945715 scopus 로고    scopus 로고
    • Recombinant expression and localization of Schistosoma mansoni cathepsin L1 support its role in the degradation of host hemoglobin
    • Brady C.P., Dowd A.J., Brindley P.J., Ryan T., Day S.R., Dalton J.P. Recombinant expression and localization of Schistosoma mansoni cathepsin L1 support its role in the degradation of host hemoglobin. Infect. Immun. 1999, 67:368-374.
    • (1999) Infect. Immun. , vol.67 , pp. 368-374
    • Brady, C.P.1    Dowd, A.J.2    Brindley, P.J.3    Ryan, T.4    Day, S.R.5    Dalton, J.P.6
  • 42
    • 18944395866 scopus 로고    scopus 로고
    • In silico identification of supertypes for class II MHCs
    • Doytchinova I.A., Flower D.R. In silico identification of supertypes for class II MHCs. J. Immunol. 2005, 174:7085-7095.
    • (2005) J. Immunol. , vol.174 , pp. 7085-7095
    • Doytchinova, I.A.1    Flower, D.R.2
  • 43
    • 0026091110 scopus 로고
    • Construction of peptides encompassing multideterminant clusters of human immunodeficiency virus envelope to induce in vitro T cell responses in mice and humans of multiple MHC types
    • Berzofsky J.A., Pendleton C.D., Clerici M., Ahlers J., Lucey D.R., Putney S.D., Shearer G.M. Construction of peptides encompassing multideterminant clusters of human immunodeficiency virus envelope to induce in vitro T cell responses in mice and humans of multiple MHC types. J. Clin. Invest. 1991, 88:876-884.
    • (1991) J. Clin. Invest. , vol.88 , pp. 876-884
    • Berzofsky, J.A.1    Pendleton, C.D.2    Clerici, M.3    Ahlers, J.4    Lucey, D.R.5    Putney, S.D.6    Shearer, G.M.7
  • 44
    • 0037378143 scopus 로고    scopus 로고
    • Recognition of mycobacterial epitopes by T cells across mammalian species and use of a program that predicts human HLA-DR binding peptides to predict bovine epitopes
    • Vordermeier M., Whelan A.O., Hewinson R.G. Recognition of mycobacterial epitopes by T cells across mammalian species and use of a program that predicts human HLA-DR binding peptides to predict bovine epitopes. Infect. Immun. 2003, 71:1980-1987.
    • (2003) Infect. Immun. , vol.71 , pp. 1980-1987
    • Vordermeier, M.1    Whelan, A.O.2    Hewinson, R.G.3
  • 45
    • 0034548224 scopus 로고    scopus 로고
    • The attachment (G) glycoprotein of respiratory syncytial virus contains a single immunodominant epitope that elicits both Th1 and Th2 CD4+ T cell responses
    • Varga S.M., Wissinger E.L., Braciale T.J. The attachment (G) glycoprotein of respiratory syncytial virus contains a single immunodominant epitope that elicits both Th1 and Th2 CD4+ T cell responses. J. Immunol. 2000, 165:6487-6495.
    • (2000) J. Immunol. , vol.165 , pp. 6487-6495
    • Varga, S.M.1    Wissinger, E.L.2    Braciale, T.J.3
  • 47
    • 77953614631 scopus 로고    scopus 로고
    • Immunization with SmIg, a novel tegument protein from Schistosoma mansoni, fails to induce protection in mice but reduces liver pathology
    • Pinho J.M., Cardoso F.C., Lopes D.O., Pinheiro C.S., Caliari M.V., Oliveira F.M., Leite L.C., Oliveira S.C. Immunization with SmIg, a novel tegument protein from Schistosoma mansoni, fails to induce protection in mice but reduces liver pathology. Parasitol. 2010, 137:1079-1088.
    • (2010) Parasitol. , vol.137 , pp. 1079-1088
    • Pinho, J.M.1    Cardoso, F.C.2    Lopes, D.O.3    Pinheiro, C.S.4    Caliari, M.V.5    Oliveira, F.M.6    Leite, L.C.7    Oliveira, S.C.8
  • 48
    • 33644674090 scopus 로고    scopus 로고
    • The tegument surface membranes of the human blood parasite Schistosoma mansoni: a proteomic analysis after differential extraction
    • Braschi S., Curwen R.S., Ashton P.D., Verjovski-Almeida S., Wilson A. The tegument surface membranes of the human blood parasite Schistosoma mansoni: a proteomic analysis after differential extraction. Proteomics 2006, 6:1471-1482.
    • (2006) Proteomics , vol.6 , pp. 1471-1482
    • Braschi, S.1    Curwen, R.S.2    Ashton, P.D.3    Verjovski-Almeida, S.4    Wilson, A.5
  • 49
    • 77955468305 scopus 로고    scopus 로고
    • Construction of cDNA libraries from mature female and male worm of Schistosoma japonicum Chinese main land strain
    • Yuan C.X., Li M., Chen Y.J., Shi Y.J., Wu X.F., Cai Y.M., Lin J.J. Construction of cDNA libraries from mature female and male worm of Schistosoma japonicum Chinese main land strain. Chin. J. Biotech. 2000, 16:727-730.
    • (2000) Chin. J. Biotech. , vol.16 , pp. 727-730
    • Yuan, C.X.1    Li, M.2    Chen, Y.J.3    Shi, Y.J.4    Wu, X.F.5    Cai, Y.M.6    Lin, J.J.7


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