메뉴 건너뛰기




Volumn 6575 LNBI, Issue , 2011, Pages 171-191

Refining dynamics of gene regulatory networks in a stochastic π-calculus framework

Author keywords

[No Author keywords available]

Indexed keywords

BREAST CANCER; DISCRETE PARAMETERS; GENE REGULATORY NETWORKS; LOGICAL FORMALISM; SEGMENTATION PROCESS; STABLE STATE; SUCCESSIVE REFINEMENT;

EID: 79957682395     PISSN: 03029743     EISSN: 16113349     Source Type: Book Series    
DOI: 10.1007/978-3-642-19748-2_8     Document Type: Conference Paper
Times cited : (19)

References (25)
  • 2
    • 38149083357 scopus 로고    scopus 로고
    • Rule-based modelling of cellular signalling
    • Caires, L., Li, L. (eds.), Springer, Heidelberg
    • Danos, V., Feret, J., Fontana, W., Harmer, R., Krivine, J.: Rule-Based Modelling of Cellular Signalling. In: Caires, L., Li, L. (eds.) CONCUR 2007. LNCS, vol. 4703, pp. 17-41. Springer, Heidelberg (2007)
    • (2007) CONCUR 2007. LNCS , vol.4703 , pp. 17-41
    • Danos, V.1    Feret, J.2    Fontana, W.3    Harmer, R.4    Krivine, J.5
  • 3
    • 0035888407 scopus 로고    scopus 로고
    • Application of a stochastic name-passing calculus to representation and simulation of molecular processes
    • DOI 10.1016/S0020-0190(01)00214-9, PII S0020019001002149
    • Priami, C., Regev, A., Shapiro, E., Silverman, W.: Application of a stochastic name-passing calculus to representation and simulation of molecular processes. Inf. Process. Lett. 80(1), 25-31 (2001) (Pubitemid 32833107)
    • (2001) Information Processing Letters , vol.80 , Issue.1 , pp. 25-31
    • Priami, C.1    Regev, A.2    Shapiro, E.3    Silverman, W.4
  • 6
    • 33645306314 scopus 로고    scopus 로고
    • Time petri nets for modelling and analysis of biochemical networks
    • Popova-Zeugmann, L., Heiner, M., Koch, I.: Time petri nets for modelling and analysis of biochemical networks. Fundamenta Informaticae 67(1), 149-162 (2005)
    • (2005) Fundamenta Informaticae , vol.67 , Issue.1 , pp. 149-162
    • Popova-Zeugmann, L.1    Heiner, M.2    Koch, I.3
  • 8
    • 57049127120 scopus 로고    scopus 로고
    • On a continuous degree of satisfaction of temporal logic formulae with applications to systems biology
    • Rizk, A., Batt, G., Fages, F., Soliman, S.: On a Continuous Degree of Satisfaction of Temporal Logic Formulae with Applications to Systems Biology. In: Computational Methods in Systems Biology, pp. 251-268 (2008)
    • (2008) Computational Methods in Systems Biology , pp. 251-268
    • Rizk, A.1    Batt, G.2    Fages, F.3    Soliman, S.4
  • 11
    • 36949019568 scopus 로고    scopus 로고
    • Hybrid modelling and dynamical analysis of gene regulatory networks with delays
    • DOI 10.1159/000110010
    • Ahmad, J., Bernot, G., Comet, J.P., Lime, D., Roux, O.: Hybrid modelling and dynamical analysis of gene regulatory networks with delays. Complexus 3(4), 231-251 (2006) (Pubitemid 350239163)
    • (2006) Complexus , vol.3 , Issue.4 , pp. 231-251
    • Ahmad, J.1    Bernot, G.2    Comet, J.-P.3    Lime, D.4    Roux, O.5
  • 12
    • 38049132336 scopus 로고    scopus 로고
    • Efficient, correct simulation of biological processes in the stochastic pi-calculus
    • Calder, M., Gilmore, S. (eds.), Springer, Heidelberg
    • Phillips, A., Cardelli, L.: Efficient, correct simulation of biological processes in the stochastic pi-calculus. In: Calder, M., Gilmore, S. (eds.) CMSB 2007. LNCS (LNBI), vol. 4695, pp. 184-199. Springer, Heidelberg (2007)
    • (2007) CMSB 2007. LNCS (LNBI) , vol.4695 , pp. 184-199
    • Phillips, A.1    Cardelli, L.2
  • 13
    • 49949112078 scopus 로고    scopus 로고
    • The beta workbench: A computational tool to study the dynamics of biological systems
    • bbn023
    • Dematte, L., Priami, C., Romanel, A.: The Beta Workbench: a computational tool to study the dynamics of biological systems. Brief Bioinform., bbn023 (2008)
    • (2008) Brief Bioinform
    • Dematte, L.1    Priami, C.2    Romanel, A.3
  • 14
    • 65549101937 scopus 로고    scopus 로고
    • Bio-pepa: A framework for the modelling and analysis of biological systems
    • Ciocchetta, F., Hillston, J.: Bio-pepa: A framework for the modelling and analysis of biological systems. Theoretical Computer Science 410(33-34), 3065-3084 (2009)
    • (2009) Theoretical Computer Science , vol.410 , Issue.33-34 , pp. 3065-3084
    • Ciocchetta, F.1    Hillston, J.2
  • 17
    • 34447270783 scopus 로고    scopus 로고
    • Semantics of biological regulatory networks
    • DOI 10.1016/j.entcs.2004.01.038, PII S157106610700494X, Proceedings of the First Workshop on Concurrent Models in Molecular Biology (BioConcur 2003)
    • Bernot, G., Cassez, F., Comet, J.P., Delaplace, F., Müller, C., Roux, O.: Semantics of biological regulatory networks. Electronic Notes in Theoretical Computer Science 180(3), 3-14 (2007) (Pubitemid 47044923)
    • (2007) Electronic Notes in Theoretical Computer Science , vol.180 , Issue.3 , pp. 3-14
    • Bernot, G.1    Cassez, F.2    Comet, J.-P.3    Delaplace, F.4    Muller, C.5    Roux, O.6
  • 18
    • 44049113210 scopus 로고
    • A calculus of mobile processes, parts. I and II
    • Milner, R.: A calculus of mobile processes, parts. I and II. Information and Computation 100, 1-77 (1992)
    • (1992) Information and Computation , vol.100 , pp. 1-77
    • Milner, R.1
  • 20
    • 84974715948 scopus 로고
    • Stochastic p-Calculus
    • Priami, C.: Stochastic p-Calculus. The Computer Journal 38(7), 578-589 (1995)
    • (1995) The Computer Journal , vol.38 , Issue.7 , pp. 578-589
    • Priami, C.1
  • 21
    • 33645429016 scopus 로고
    • Exact stochastic simulation of coupled chemical reactions
    • Gillespie, D.T.: Exact stochastic simulation of coupled chemical reactions. The Journal of Physical Chemistry 81(25), 2340-2361 (1977)
    • (1977) The Journal of Physical Chemistry , vol.81 , Issue.25 , pp. 2340-2361
    • Gillespie, D.T.1
  • 23
    • 37349116795 scopus 로고    scopus 로고
    • Deriving structure from evolution: Metazoan segmentation
    • Francois, P., Hakim, V., Siggia, E.D.: Deriving structure from evolution: metazoan segmentation. Mol. Syst. Biol. 3 (2007)
    • (2007) Mol. Syst. Biol. , vol.3
    • Francois, P.1    Hakim, V.2    Siggia, E.D.3
  • 24
    • 79957680269 scopus 로고    scopus 로고
    • Phillips, A.: SPiM, http://research.microsoft.com/~aphillip/spim
    • SPiM
    • Phillips, A.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.