-
1
-
-
36949019568
-
Hybrid Mod- elling and Dynamical Analysis of Gene Regulatory Networks with Delays
-
Cover Date: November 2007
-
Ahmad J.; Bernot, G.; Comet J.P.; Lime D.; and Roux O. 2006 Cover Date: November 2007). Hybrid Mod- elling and Dynamical Analysis of Gene Regulatory Networks with Delays. Com Plex Us, 3, no. 4, 231-251.
-
(2006)
Com Plex Us
, vol.3
, Issue.4
, pp. 231-251
-
-
Ahmad, J.1
Bernot, G.2
Comet, J.P.3
Lime, D.4
Roux, O.5
-
2
-
-
0037686112
-
The topology of the regulatory interactions predicts the expression pat- Tern of the segment polarity genes in Drosophila rnelanogaster
-
Albert R. and Othmer H., 2003. The topology of the regulatory interactions predicts the expression pat- Tern of the segment polarity genes in Drosophila rnelanogaster. J Theor Biol, 223, 1-18.
-
(2003)
J Theor Biol
, vol.223
, pp. 1-18
-
-
Albert, R.1
Othmer, H.2
-
3
-
-
3042693879
-
Application of formal methods to biological regulatory networks: Extending Thomas' asynchronous logical approach with temporal logic
-
Bernot G.: Comet J.P.; Richard A.; and Guespin J., 2004. Application of Formal Methods to Biologi- cal Regulatory Networks: Extending Thomas' Asyn- chronous Logical Approach with Temporal Logic. J Theor Biol, 229, no. 3, 339-347.
-
(2004)
J Theor Biol
, vol.229
, Issue.3
, pp. 339-347
-
-
Bernot, G.1
Comet, J.P.2
Richard, A.3
Guespin, J.4
-
5
-
-
35048889119
-
Qualitative Modelling of genetic networks: From logical regulatory graphs to standard Petri nets
-
Springer-Verlag, LNCS 3099
-
Chaouiya C.; Rcmy E.; Ruct P.; and Thieffry D., 2004. Qualitative Modelling of Genetic Networks: From Logical Regulatory Graphs to Standard Petri Nets. In ICATPN 2004. Springer-Verlag, LNCS 3099, 137-156.
-
(2004)
ICATPN 2004
, pp. 137-156
-
-
Chaouiya, C.1
Rcmy, E.2
Ruct, P.3
Thieffry, D.4
-
6
-
-
34250811943
-
Biological transactions for quantitative models
-
Ciocchetta F. and Priami C., 2007. Biological Trans- Actions for Quantitative Models. ENTCS, 171, no. 2, 55-67.
-
(2007)
ENTCS
, vol.171
, Issue.2
, pp. 55-67
-
-
Ciocchetta, F.1
Priami, C.2
-
7
-
-
26444574877
-
Modeling multi- valued genetic regulatory networks using high-level Petri nets
-
LNCS, vol. 3536
-
Comet J.P.; Klaudel H.; and Liauzu S., 2005. Modeling Multi- Valued Genetic Regulatory Networks Using High-Level Petri Nets. In ICATPN 2005. LNCS, vol. 3536, 208-227.
-
(2005)
ICATPN 2005
, pp. 208-227
-
-
Comet, J.P.1
Klaudel, H.2
Liauzu, S.3
-
8
-
-
0036207347
-
Modeling and simulation of genetic regulatory systems: A literature review
-
deJong H., 2002. Modeling and simulation of genetic regulatory systems: A literature review. J Comput Biol 9, no. 1, 67-103.
-
(2002)
J Comput Biol
, vol.9
, Issue.1
, pp. 67-103
-
-
De Jong, H.1
-
9
-
-
10444281590
-
Modeling and simulation of fission yeast cell cycle on hybrid functional Petri net
-
Fujita S.; Matsui M.; Matsuno H.; and Miyano S., 2004. Modeling and simulation of fission yeast cell cycle on hybrid functional Petri net. IEICE Transactions on Fundamentals of Electronics, Communications and Computer Sciences, E87-A(11), 2919-2928.
-
(2004)
IEICE Transactions on Fundamentals of Electronics, Communications and Computer Sciences
, vol.E87-A
, Issue.11
, pp. 2919-2928
-
-
Fujita, S.1
Matsui, M.2
Matsuno, H.3
Miyano, S.4
-
10
-
-
0035912845
-
Timing of metamorphosis and the onset of the negative feedback loop between the thyroid gland and the pitu- itary is controlled by type II iodothyronine deiodinase in Xenopus laems
-
Huang H.; Cai L.; Remo B.: And Brown O. 2001. Timing of metamorphosis and the onset of the negative feedback loop between the thyroid gland and the pitu- itary is controlled by type II iodothyronine deiodinase in Xenopus laems. Proc Natl Acad Sci, 98, no. 13, 7348-7353.
-
(2001)
Proc Natl Acad Sci
, vol.98
, Issue.13
, pp. 7348-7353
-
-
Huang, H.1
Cai, L.2
Remo, B.3
Brown, O.4
-
11
-
-
54249116230
-
Genetic regulatory mechanisms in the synthesis of protein
-
Jacob F. and Monod J., 1961. Genetic regulatory mecha- nisms in the synthesis of protein. Journal of molecular biology, 3, 318-356.
-
(1961)
Journal of Molecular Biology
, vol.3
, pp. 318-356
-
-
Jacob, F.1
Monod, J.2
-
12
-
-
33646337667
-
A methodology for the structural and functional analysis of signaling and regulatory networks
-
Klamt S.: Saez-Rodriguez J.; Lindquist J.A.; Simeoni L.; and Gilles E.D., 2006. A methodology for the structural and functional analysis of signaling and regulatory networks. BMC Bioinformatics, 7, 56.
-
(2006)
BMC Bioinformatics
, vol.7
, pp. 56
-
-
Klamt, S.1
Saez-Rodriguez, J.2
Lindquist, J.A.3
Simeoni, L.4
Gilles, E.D.5
-
14
-
-
84899016120
-
Amphibian metamorphosis: From morphology to molecular biology
-
Shi Y.B., 2000. Amphibian Metamorphosis: From Morphology to Molecular Biology. Cell Biology International, 24, 909.
-
(2000)
Cell Biology International
, vol.24
, pp. 909
-
-
Shi, Y.B.1
-
15
-
-
38049141165
-
Context sensitivity in logical modelling with time delays
-
(Ed.), Computational Methods in Systems Biology, CMSB 2007. Springer
-
Sicbert H. and Bockmayr A., 2007. Context Sensitiv- ity in Logical Modelling with Time Delays. In LNBI (Ed.), Computational Methods in Systems Biology, CMSB 2007. Springer, vol. 4695, 64-79.
-
(2007)
LNBI
, vol.4695
, pp. 64-79
-
-
Sicbert, H.1
Bockmayr, A.2
-
16
-
-
0033782304
-
Modeling transcriptional control in gene networks: Methods, recent results, and future directions
-
Smolen P.; Baxter D.; and Byrne J., 2000. Modeling transcriptional control in gene networks: Methods, recent results, and future directions. Bulletin of Mathematical Biology, 62, no. 2, 247-292.
-
(2000)
Bulletin of Mathematical Biology
, vol.62
, Issue.2
, pp. 247-292
-
-
Smolen, P.1
Baxter, D.2
Byrne, J.3
-
17
-
-
0001923376
-
Necessary conditions for multistationarity and stable periodicity
-
Snoussi E., 1998. Necessary conditions for multistationarity and stable periodicity. Journal of Biological Systems, 6, 3-9.
-
(1998)
Journal of Biological Systems
, vol.6
, pp. 3-9
-
-
Snoussi, E.1
-
18
-
-
0025948178
-
Regulatory networks as seen asynchronous automata: A logical description
-
Thomas R., 1991. Regulatory networks as seen asynchronous automata: A logical description. J theor Biol, 153, 1-23.
-
(1991)
J Theor Biol
, vol.153
, pp. 1-23
-
-
Thomas, R.1
-
20
-
-
0029267491
-
Dynamical behaviour of biological regulatory networks
-
Thomas R.; Thieffry D.; and Kaufman M., 1995. Dynamical behaviour of biological regulatory networks. Bull Math Biol, 57, no. 2, 247-270.
-
(1995)
Bull Math Biol
, vol.57
, Issue.2
, pp. 247-270
-
-
Thomas, R.1
Thieffry, D.2
Kaufman, M.3
-
22
-
-
0036894004
-
Distinctive gene profiles occur at. Key points during natural metamorphosis in the Xenopus laevis tadpole tail
-
Veldhoen N.; Crump D.; Werry K.; and Helbing C., 2002. Distinctive gene profiles occur at. key points during natural metamorphosis in the Xenopus laevis tadpole tail. Developmental Dynamics, 225, 457-468.
-
(2002)
Developmental Dynamics
, vol.225
, pp. 457-468
-
-
Veldhoen, N.1
Crump, D.2
Werry, K.3
Helbing, C.4
-
23
-
-
0027220692
-
Thyroid hormon induced gene expression program for amphibian tail re- sorption
-
Wang Z. and Brown D.D., 1993. Thyroid hormon in- duced gene expression program for amphibian tail re- sorption. Journal of biological Chemistry, 268, no. 22, 16270-16278.
-
(1993)
Journal of Biological Chemistry
, vol.268
, Issue.22
, pp. 16270-16278
-
-
Wang, Z.1
Brown, D.D.2
|