Phyllosphere bacterial communities associated with the degradation of acetamiprid in phaseolus vulgaris

African Journal of Biotechnology

Volumn 10, Issue 19, 2011, Pages 3809-3817

  Zhou, Yu ^a,c   Qiao, Xiongwu ^b   Li, Wenjun ^c   Xu, Junfeng ^a   Wang, Wei ^a   Chen, Xiaoyun ^a  

^a INSTITUTE OF PLANT PROTECTION AND MICROBIOLOGY   (China)

^b Shanxi Academy of Agricultural Sciences   (China)

^c YUNNAN UNIVERSITY   (China)

Author keywords

16S rDNA; Acetamiprid degradation; Microbial community structure; Phyllosphere; Polymerase chain reaction denaturing gradient gel electrophoresis (PCR DGGE)

Indexed keywords

ACETAMIPRID; INSECTICIDE; UNCLASSIFIED DRUG;

ANALYTIC METHOD; ARTICLE; BIODEGRADATION; BIOREMEDIATION; CHEMICAL ANALYSIS; COMMUNITY STRUCTURE; CONTROLLED STUDY; DENATURING GRADIENT GEL ELECTROPHORESIS; LIMIT OF DETECTION; LIMIT OF QUANTITATION; MICROBIAL COMMUNITY; MICROCOSM; MICROORGANISM; NONHUMAN; PHASEOLUS VULGARIS; PLANT LEAF; POPULATION DYNAMICS; RNA FINGERPRINTING;

BACTERIA (MICROORGANISMS); PHASEOLUS VULGARIS;

EID: 79957554386     PISSN: 16845315     EISSN: None     Source Type: Journal    
DOI: None     Document Type: Article

References (24)

1. Abramovitch A (2002). United States Environmental Protection Agency, Office of Prevention, Pesticides and Toxic Substances (7501C). p. 1-14.
2. Blackwood CB, Waldrop MP, Zak DR, Sinsabaugh RL (2007). Molecular analysis of fungal communities and laccase genes in decomposing litter reveals differences among forest types but no impact of nitrogen deposition. Environ. Microbiol. 9: 1306-1316.
3. Debarati P, Gunjan P, Pandey J, Rakesh KJ (2005). Accessing microbial diversity for bioremediation and environmental restoration. Trends Biotech. 23: 125-142.
4. Dai Y, Zhao Y, Zhang W, Yu C, Ji W, Xu W, Ni J, Yuan S (2010A). Biotransformation of thianicotinyl neonicotinoid insecticides: diverse molecular substituents response to metabolism by bacterium Stenotrophomonas maltophilia CGMCC 1.1788. Bioresourse Technol. 101: 3838-3843.
5. Dai Y, Ji W, Chen T, Zhang W, Liu Z, Ge F, Yuan S (2010B). Metabolism of the Neonicotinoid insecticides acetamiprid and thiacloprid by the yeast Rhodotorula mucilaginosa strain IM-2. J. Agric. Food Chem. 58: 2419-2425.
6. Ghezzi JI, Steck TR (1999). Induction of the viable but non-culturable condition in Xanthomonas campestris pv. Campestris in liquid microcosms and sterile soil. FEMS Microbiol. Eco. 30: 203-208.
7. John HA, Harris RF (2000). The ecology and biogeography of microorganisms on plant surfaces. Annu. Rev. Phytopathol. 38: 145-180.
8. Julien M, Reeledr, RD (1987). Effects of the pesticides maneb and carbaryl on the phylloplane microflora of lettuce. Can. J. Microbiol. 33: 212-216.
9. Lindow SE, Brandl MT (2003). Microbiology of the Phyllosphere. Appl. Enviorn. Microbiol. 69: 1875-1883.
10. Marmur J (1961). A procedure for the isolation of deoxyribonucleic acid from microorganisms. J. Mol. Biol. 3: 208-218.
11. Muyzer G, Waal EC, Uitterlinden AG (1993). Profiling of complex microbial populations by denaturing gradient gel electrophoresis analysis of polymerase chain reaction-amplified genes encoding for 16S rRNA. Appl. Enviorn. Microbiol. 59: 695-700.
12. Obana H, Okihashi M, Akutsu K, Kitagawa Y, Hori S (2003). Determination of Neonicotinoid Pesticide Residues in Vegetables and Fruits with Solid Phase Extraction and Liquid Chromatography Mass Spectrometry. J. Agric. Food Chem. 51: 2501-2505.
13. Petit V, Cabridenc R, Swannell RPJ, Sokhi RS (1995). Review of strategies for modelling the environmental fate of pesticides discharged into riverine systems. Environ. Intern. 21: 167-176.
14. Richard JE, Philip M, Andrew JW, John CF (2003). Cultivation-Dependent and -Independent Approaches for Determining Bacterial Diversity in Heavy-Metal-Contaminated Soil. Appl. Enviorn. Microbiol. 69: 3223-3230.
15. Sambrook J, Russell DW (2002). Molecular Cloning: a Laboratory Manual, 3rd edition. (Cold Spring Harbor Press, Cold Spring Harbor, NY), pp. 1595-1596.
16. Sanguinetti CJ, Dias, ND, Simpson AJG (1994). Rapid silver staining and recovery of PCR products separated on polyacrylamide gels. BioTechniques 17: 915-919.
17. Sei K, Inoue D, Wada K, Mori K, Ike M, Kohno T, Fujita M (2004). Monitoring behavior of catabolic genes and change of microbial community structures in seawater microcosms during aromatic compound degradation. Water Research, 38: 4405-4414.
18. Shannon CE, Weaver W (1963). The mathematical theory of communication. The 5th edition, University of Illinois Press, Urbana. p. 1-54.
19. Simpson EH (1949). Measurement of diversity. Nature 163: 688.
20. Ward DM, Weller R, Bateson MM (1990). 16S rRNA sequences reveal uncultured microorganisms in a natural community. Nature 345: 63-65.
21. Wilson M, Hirano SS, Lindow SE (1999). Location and survival of leaf-associated bacteria in relation to pathogenicity and potential for growth within the leaf. Appl. Enviorn. Microbiol. 65: 1435-1443.
22. Yang CH, Crowley DE, Borneman J, Keen NT (2001). Microbial phyllosphere populations are more complex than previously realized. Proc. Natl. Acad. Sci. 98: 3889-3894.
23. Zwillich D (2000). A tentative comeback for bioremediation. Science, 289: 2266-2267.
24. Zhou, JZ, Bruns MA, Tiedje JM (1996). DNA recovery from soils of diverse composition. Appl. Enviorn. Microbiol. 62: 316-322.