메뉴 건너뛰기




Volumn 307, Issue 1, 2011, Pages 37-46

A prognostic multigene classifier for squamous cell carcinomas of the larynx

Author keywords

Gene expression profiling; Imprinting; Laryngeal cancer; Molecular classification

Indexed keywords

HISTONE; HISTONE HIST1H3F; SMALL NUCLEOLAR RNA; SNORA16A; SNORD14C; UNCLASSIFIED DRUG;

EID: 79957473966     PISSN: 03043835     EISSN: 18727980     Source Type: Journal    
DOI: 10.1016/j.canlet.2011.03.013     Document Type: Article
Times cited : (46)

References (62)
  • 1
    • 73349109111 scopus 로고    scopus 로고
    • Alcohol and tobacco use prediagnosis and postdiagnosis, and survival in a cohort of patients with early stage cancers of the oral cavity, pharynx, and larynx
    • Mayne S.T., Cartmel B., Kirsh V., Goodwin W.J. Alcohol and tobacco use prediagnosis and postdiagnosis, and survival in a cohort of patients with early stage cancers of the oral cavity, pharynx, and larynx. Cancer Epidemiol. Biomarkers Prev. 2009, 18:3368-3374.
    • (2009) Cancer Epidemiol. Biomarkers Prev. , vol.18 , pp. 3368-3374
    • Mayne, S.T.1    Cartmel, B.2    Kirsh, V.3    Goodwin, W.J.4
  • 3
    • 0025807080 scopus 로고
    • The Department of Veterans Affairs Laryngeal Cancer Study Group, Induction chemotherapy plus radiation compared with surgery plus radiation in patients with advanced laryngeal cancer, N. Engl. J. Med.
    • The Department of Veterans Affairs Laryngeal Cancer Study Group, Induction chemotherapy plus radiation compared with surgery plus radiation in patients with advanced laryngeal cancer, N. Engl. J. Med. 324 (1991) 1685-1690.
    • (1991) , vol.324 , pp. 1685-1690
  • 7
    • 75149178657 scopus 로고    scopus 로고
    • Reexamining the treatment of advanced laryngeal cancer: the VA laryngeal cancer study revisited
    • Wolf G.T. Reexamining the treatment of advanced laryngeal cancer: the VA laryngeal cancer study revisited. Head Neck 2010, 32:7-14.
    • (2010) Head Neck , vol.32 , pp. 7-14
    • Wolf, G.T.1
  • 8
    • 74949087804 scopus 로고    scopus 로고
    • Reexamining the treatment of advanced laryngeal cancer
    • Olsen K.D. Reexamining the treatment of advanced laryngeal cancer. Head Neck 2010, 32:1-7.
    • (2010) Head Neck , vol.32 , pp. 1-7
    • Olsen, K.D.1
  • 9
    • 75149139891 scopus 로고    scopus 로고
    • Larynx preservation and survival trends: should there be concern?
    • Forastiere A.A. Larynx preservation and survival trends: should there be concern?. Head Neck 2010, 32:14-17.
    • (2010) Head Neck , vol.32 , pp. 14-17
    • Forastiere, A.A.1
  • 13
    • 67650360215 scopus 로고    scopus 로고
    • Role of molecular markers and gene profiling in head and neck cancers
    • Gold K.A., Kim E.S. Role of molecular markers and gene profiling in head and neck cancers. Curr. Opin. Oncol. 2009, 21:206-211.
    • (2009) Curr. Opin. Oncol. , vol.21 , pp. 206-211
    • Gold, K.A.1    Kim, E.S.2
  • 14
    • 65949099727 scopus 로고    scopus 로고
    • Influence of aspirin and cigarette smoke extract on the expression of cyclin D1 and effects of cell cycle in esophageal squamous cell carcinoma cell line
    • Hu H., Zhang S., Zhu S. Influence of aspirin and cigarette smoke extract on the expression of cyclin D1 and effects of cell cycle in esophageal squamous cell carcinoma cell line. Dis. Esophagus 2009, 22:310-316.
    • (2009) Dis. Esophagus , vol.22 , pp. 310-316
    • Hu, H.1    Zhang, S.2    Zhu, S.3
  • 20
    • 20544465379 scopus 로고    scopus 로고
    • Rare amplicons implicate frequent deregulation of cell fate specification pathways in oral squamous cell carcinoma
    • Snijders A.M., Schmidt B.L., Fridlyand J., Dekker N., Pinkel D., Jordan R.C., Albertson D.G. Rare amplicons implicate frequent deregulation of cell fate specification pathways in oral squamous cell carcinoma. Oncogene 2005, 24:4232-4242.
    • (2005) Oncogene , vol.24 , pp. 4232-4242
    • Snijders, A.M.1    Schmidt, B.L.2    Fridlyand, J.3    Dekker, N.4    Pinkel, D.5    Jordan, R.C.6    Albertson, D.G.7
  • 24
    • 0037076272 scopus 로고    scopus 로고
    • Diagnosis of multiple cancer types by shrunken centroids of gene expression
    • Tibshirani R., Hastie T., Narasimhan B., Chu G. Diagnosis of multiple cancer types by shrunken centroids of gene expression. Proc. Natl Acad. Sci. USA 2002, 99:6567-6572.
    • (2002) Proc. Natl Acad. Sci. USA , vol.99 , pp. 6567-6572
    • Tibshirani, R.1    Hastie, T.2    Narasimhan, B.3    Chu, G.4
  • 26
    • 84898982939 scopus 로고    scopus 로고
    • Exploiting generative models in discriminative classifiers
    • MIT Press, Boston, M. Kearns, S. Solla, D. Cohn (Eds.)
    • Jaakkola T., Haussler D. Exploiting generative models in discriminative classifiers. Advances in Neural Information Processing Systems 1998, 487-493. MIT Press, Boston. M. Kearns, S. Solla, D. Cohn (Eds.).
    • (1998) Advances in Neural Information Processing Systems , pp. 487-493
    • Jaakkola, T.1    Haussler, D.2
  • 27
    • 0027002164 scopus 로고
    • The feature selection problem: traditional methods and a new algorithm
    • MIT Press, San José, CA, A. Press (Ed.)
    • Kira K., Rendel L. The feature selection problem: traditional methods and a new algorithm. Tenth National Conference on Artificial Intelligence 1992, 129-134. MIT Press, San José, CA. A. Press (Ed.).
    • (1992) Tenth National Conference on Artificial Intelligence , pp. 129-134
    • Kira, K.1    Rendel, L.2
  • 28
    • 0038620211 scopus 로고    scopus 로고
    • Prediction of clinical outcome with microarray data: a partial least squares discriminant analysis (PLS-DA) approach
    • Perez-Enciso M., Tenenhaus M. Prediction of clinical outcome with microarray data: a partial least squares discriminant analysis (PLS-DA) approach. Hum. Genet. 2003, 112:581-592.
    • (2003) Hum. Genet. , vol.112 , pp. 581-592
    • Perez-Enciso, M.1    Tenenhaus, M.2
  • 29
    • 0033213971 scopus 로고    scopus 로고
    • Stepwise selection in small data sets: a simulation study of bias in logistic regression analysis
    • Steyerberg E.W., Eijkemans M.J., Habbema J.D. Stepwise selection in small data sets: a simulation study of bias in logistic regression analysis. J. Clin. Epidemiol. 1999, 52:935-942.
    • (1999) J. Clin. Epidemiol. , vol.52 , pp. 935-942
    • Steyerberg, E.W.1    Eijkemans, M.J.2    Habbema, J.D.3
  • 30
    • 0001450383 scopus 로고
    • The distribution theory of Runs
    • Mood A. The distribution theory of Runs. Ann. Math. Statistics 1940, 11:367-392.
    • (1940) Ann. Math. Statistics , vol.11 , pp. 367-392
    • Mood, A.1
  • 32
    • 0036281211 scopus 로고    scopus 로고
    • Processing of gene expression data generated by quantitative real-time RT-PCR
    • Mueller P.Y., Janovjak H., Miserez A.R., Dobbie Z. Processing of gene expression data generated by quantitative real-time RT-PCR. BioTechniques 2002, 32:1372-1378.
    • (2002) BioTechniques , vol.32 , pp. 1372-1378
    • Mueller, P.Y.1    Janovjak, H.2    Miserez, A.R.3    Dobbie, Z.4
  • 33
    • 51149111202 scopus 로고    scopus 로고
    • Host defenses against human papillomaviruses: lessons from epidermodysplasia verruciformis
    • Orth G. Host defenses against human papillomaviruses: lessons from epidermodysplasia verruciformis. Curr. Top. Microbiol. Immunol. 2008, 321:59-83.
    • (2008) Curr. Top. Microbiol. Immunol. , vol.321 , pp. 59-83
    • Orth, G.1
  • 34
    • 0032422138 scopus 로고    scopus 로고
    • Human papilloma virus (HPV) type 16 and 18 detected in head and neck squamous cell carcinoma
    • Mineta H., Ogino T., Amano H.M., Ohkawa Y., Araki K., Takebayashi S., Miura K. Human papilloma virus (HPV) type 16 and 18 detected in head and neck squamous cell carcinoma. Anticancer Res. 1998, 18:4765-4768.
    • (1998) Anticancer Res. , vol.18 , pp. 4765-4768
    • Mineta, H.1    Ogino, T.2    Amano, H.M.3    Ohkawa, Y.4    Araki, K.5    Takebayashi, S.6    Miura, K.7
  • 35
    • 34250887474 scopus 로고    scopus 로고
    • Taking gene-expression profiling to the clinic: when will molecular signatures become relevant to patient care?
    • Sotiriou C., Piccart M.J. Taking gene-expression profiling to the clinic: when will molecular signatures become relevant to patient care?. Nat. Rev. Cancer 2007, 7:545-553.
    • (2007) Nat. Rev. Cancer , vol.7 , pp. 545-553
    • Sotiriou, C.1    Piccart, M.J.2
  • 37
    • 44949123698 scopus 로고    scopus 로고
    • The molecular genetics of laryngeal cancer
    • Loyo M., Pai S.I. The molecular genetics of laryngeal cancer. Otolaryngol. Clin. North Am. 2008, 41:657-672,.
    • (2008) Otolaryngol. Clin. North Am. , vol.41 , pp. 657-672
    • Loyo, M.1    Pai, S.I.2
  • 38
    • 38549141895 scopus 로고    scopus 로고
    • Metastasis signatures: genes regulating tumor-microenvironment interactions predict metastatic behavior
    • Albini A., Mirisola V., Pfeffer U. Metastasis signatures: genes regulating tumor-microenvironment interactions predict metastatic behavior. Cancer Metastasis Rev. 2008, 27:75-83.
    • (2008) Cancer Metastasis Rev. , vol.27 , pp. 75-83
    • Albini, A.1    Mirisola, V.2    Pfeffer, U.3
  • 40
    • 68049120432 scopus 로고    scopus 로고
    • Prediction of breast cancer metastasis by genomic profiling: where do we stand?
    • Pfeffer U., Romeo F., Noonan D.M., Albini A. Prediction of breast cancer metastasis by genomic profiling: where do we stand?. Clin. Exp. Metastasis 2009, 26:547-558.
    • (2009) Clin. Exp. Metastasis , vol.26 , pp. 547-558
    • Pfeffer, U.1    Romeo, F.2    Noonan, D.M.3    Albini, A.4
  • 41
    • 0035879561 scopus 로고    scopus 로고
    • GSTM1, GSTT1, and the risk of squamous cell carcinoma of the head and neck: a mini-HuGE review
    • Geisler S.A., Olshan A.F. GSTM1, GSTT1, and the risk of squamous cell carcinoma of the head and neck: a mini-HuGE review. Am. J. Epidemiol. 2001, 154:95-105.
    • (2001) Am. J. Epidemiol. , vol.154 , pp. 95-105
    • Geisler, S.A.1    Olshan, A.F.2
  • 43
    • 0036024553 scopus 로고    scopus 로고
    • Oral cavity and pharynx cancer incidence rates in the United States, 1975-1998
    • Canto M.T., Devesa S.S. Oral cavity and pharynx cancer incidence rates in the United States, 1975-1998. Oral Oncol. 2002, 38:610-617.
    • (2002) Oral Oncol. , vol.38 , pp. 610-617
    • Canto, M.T.1    Devesa, S.S.2
  • 44
    • 77955282693 scopus 로고    scopus 로고
    • HPV-associated head and neck cancer: a virus-related cancer epidemic
    • Marur S., D'Souza G., Westra W.H., Forastiere A.A. HPV-associated head and neck cancer: a virus-related cancer epidemic. Lancet Oncol. 2010, 11:781-789.
    • (2010) Lancet Oncol. , vol.11 , pp. 781-789
    • Marur, S.1    D'Souza, G.2    Westra, W.H.3    Forastiere, A.A.4
  • 46
    • 0028356544 scopus 로고
    • Loss of imprinting of IGF2 is linked to reduced expression and abnormal methylation of H19 in Wilms' tumour
    • Steenman M.J., Rainier S., Dobry C.J., Grundy P., Horon I.L., Feinberg A.P. Loss of imprinting of IGF2 is linked to reduced expression and abnormal methylation of H19 in Wilms' tumour. Nat. Genet. 1994, 7:433-439.
    • (1994) Nat. Genet. , vol.7 , pp. 433-439
    • Steenman, M.J.1    Rainier, S.2    Dobry, C.J.3    Grundy, P.4    Horon, I.L.5    Feinberg, A.P.6
  • 47
    • 0027496294 scopus 로고
    • Imprinting of human H19: allele-specific CpG methylation, loss of the active allele in Wilms tumor, and potential for somatic allele switching
    • Zhang Y., Shields T., Crenshaw T., Hao Y., Moulton T., Tycko B. Imprinting of human H19: allele-specific CpG methylation, loss of the active allele in Wilms tumor, and potential for somatic allele switching. Am. J. Hum. Genet. 1993, 53:113-124.
    • (1993) Am. J. Hum. Genet. , vol.53 , pp. 113-124
    • Zhang, Y.1    Shields, T.2    Crenshaw, T.3    Hao, Y.4    Moulton, T.5    Tycko, B.6
  • 48
    • 0030760633 scopus 로고    scopus 로고
    • Inactivation of H19, an imprinted and putative tumor repressor gene, is a preneoplastic event during Wilms' tumorigenesis
    • Cui H., Hedborg F., He L., Nordenskjold A., Sandstedt B., Pfeifer-Ohlsson S., Ohlsson R. Inactivation of H19, an imprinted and putative tumor repressor gene, is a preneoplastic event during Wilms' tumorigenesis. Cancer Res. 1997, 57:4469-4473.
    • (1997) Cancer Res. , vol.57 , pp. 4469-4473
    • Cui, H.1    Hedborg, F.2    He, L.3    Nordenskjold, A.4    Sandstedt, B.5    Pfeifer-Ohlsson, S.6    Ohlsson, R.7
  • 49
    • 0030973543 scopus 로고    scopus 로고
    • Epigenetic changes at the insulin-like growth factor II/H19 locus in developing kidney is an early event in Wilms tumorigenesis
    • Okamoto K., Morison I.M., Taniguchi T., Reeve A.E. Epigenetic changes at the insulin-like growth factor II/H19 locus in developing kidney is an early event in Wilms tumorigenesis. Proc. Natl Acad. Sci. USA 1997, 94:5367-5371.
    • (1997) Proc. Natl Acad. Sci. USA , vol.94 , pp. 5367-5371
    • Okamoto, K.1    Morison, I.M.2    Taniguchi, T.3    Reeve, A.E.4
  • 51
    • 4444365791 scopus 로고    scopus 로고
    • Microdeletions in the human H19 DMR result in loss of IGF2 imprinting and Beckwith-Wiedemann syndrome
    • Sparago A., Cerrato F., Vernucci M., Ferrero G.B., Silengo M.C., Riccio A. Microdeletions in the human H19 DMR result in loss of IGF2 imprinting and Beckwith-Wiedemann syndrome. Nat. Genet. 2004, 36:958-960.
    • (2004) Nat. Genet. , vol.36 , pp. 958-960
    • Sparago, A.1    Cerrato, F.2    Vernucci, M.3    Ferrero, G.B.4    Silengo, M.C.5    Riccio, A.6
  • 53
    • 0032419812 scopus 로고    scopus 로고
    • Deletion of the H19 differentially methylated domain results in loss of imprinted expression of H19 and Igf2
    • Thorvaldsen J.L., Duran K.L., Bartolomei M.S. Deletion of the H19 differentially methylated domain results in loss of imprinted expression of H19 and Igf2. Genes Dev. 1998, 12:3693-3702.
    • (1998) Genes Dev. , vol.12 , pp. 3693-3702
    • Thorvaldsen, J.L.1    Duran, K.L.2    Bartolomei, M.S.3
  • 54
    • 0034713375 scopus 로고    scopus 로고
    • Methylation of a CTCF-dependent boundary controls imprinted expression of the Igf2 gene
    • Bell A.C., Felsenfeld G. Methylation of a CTCF-dependent boundary controls imprinted expression of the Igf2 gene. Nature 2000, 405:482-485.
    • (2000) Nature , vol.405 , pp. 482-485
    • Bell, A.C.1    Felsenfeld, G.2
  • 55
    • 0032878252 scopus 로고    scopus 로고
    • Methylation sequencing analysis refines the region of H19 epimutation in Wilms tumor
    • Frevel M.A., Sowerby S.J., Petersen G.B., Reeve A.E. Methylation sequencing analysis refines the region of H19 epimutation in Wilms tumor. J. Biol. Chem. 1999, 274:29331-29340.
    • (1999) J. Biol. Chem. , vol.274 , pp. 29331-29340
    • Frevel, M.A.1    Sowerby, S.J.2    Petersen, G.B.3    Reeve, A.E.4
  • 56
    • 0035172234 scopus 로고    scopus 로고
    • Regulatory mechanisms at the mouse Igf2/H19 locus
    • Kaffer C.R., Grinberg A., Pfeifer K. Regulatory mechanisms at the mouse Igf2/H19 locus. Mol. Cell. Biol. 2001, 21:8189-8196.
    • (2001) Mol. Cell. Biol. , vol.21 , pp. 8189-8196
    • Kaffer, C.R.1    Grinberg, A.2    Pfeifer, K.3
  • 57
    • 0037213555 scopus 로고    scopus 로고
    • H19 and Igf2 - enhancing the confusion?
    • Arney K.L. H19 and Igf2 - enhancing the confusion?. Trends Genet. 2003, 19:17-23.
    • (2003) Trends Genet. , vol.19 , pp. 17-23
    • Arney, K.L.1
  • 58
    • 77950881915 scopus 로고    scopus 로고
    • Oncofetal H19-derived miR-675 regulates tumor suppressor RB in human colorectal cancer
    • Tsang W.P., Ng E.K., Ng S.S., Jin H., Yu J., Sung J.J., Kwok T.T. Oncofetal H19-derived miR-675 regulates tumor suppressor RB in human colorectal cancer. Carcinogenesis 2010, 31:350-358.
    • (2010) Carcinogenesis , vol.31 , pp. 350-358
    • Tsang, W.P.1    Ng, E.K.2    Ng, S.S.3    Jin, H.4    Yu, J.5    Sung, J.J.6    Kwok, T.T.7
  • 59
    • 2942718696 scopus 로고    scopus 로고
    • Human box H/ACA pseudouridylation guide RNA machinery
    • Kiss A.M., Jady B.E., Bertrand E., Kiss T. Human box H/ACA pseudouridylation guide RNA machinery. Mol. Cell. Biol. 2004, 24:5797-5807.
    • (2004) Mol. Cell. Biol. , vol.24 , pp. 5797-5807
    • Kiss, A.M.1    Jady, B.E.2    Bertrand, E.3    Kiss, T.4
  • 60
    • 77749329940 scopus 로고    scopus 로고
    • Box H/ACA small ribonucleoproteins
    • Kiss T., Fayet-Lebaron E., Jady B.E. Box H/ACA small ribonucleoproteins. Mol Cell 2010, 37:597-606.
    • (2010) Mol Cell , vol.37 , pp. 597-606
    • Kiss, T.1    Fayet-Lebaron, E.2    Jady, B.E.3
  • 62
    • 0036898897 scopus 로고    scopus 로고
    • Histone mRNA expression: multiple levels of cell cycle regulation and important developmental consequences
    • Marzluff W.F., Duronio R.J. Histone mRNA expression: multiple levels of cell cycle regulation and important developmental consequences. Curr. Opin. Cell Biol. 2002, 14:692-699.
    • (2002) Curr. Opin. Cell Biol. , vol.14 , pp. 692-699
    • Marzluff, W.F.1    Duronio, R.J.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.