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Volumn 6124 LNCS, Issue , 2010, Pages 180-190

Indexing similar DNA sequences

Author keywords

[No Author keywords available]

Indexed keywords

BASIC OPERATION; GENETIC VARIATION; GENOMIC SEQUENCE; MEMORY REQUIREMENTS; R-SEQUENCES; SEARCHING TIME; TOTAL LENGTH;

EID: 79956310837     PISSN: 03029743     EISSN: 16113349     Source Type: Book Series    
DOI: 10.1007/978-3-642-14355-7_19     Document Type: Conference Paper
Times cited : (36)

References (14)
  • 3
    • 0035399728 scopus 로고    scopus 로고
    • SNP association studies in Alzheimer's disease highlight problems for complex disease analysis
    • DOI 10.1016/S0168-9525(01)02342-3, PII S0168952501023423
    • Emahazion, T., Feuk, L., Jobs, M., Sawyer, S.L., Fredman, D., Clair, D.S., Prince, J.A., Brookes, A.J.: SNP association studies in Alzheimer's disease highlight problems for complex disease analysis. Trends in Genetics 17(7), 407-413 (2001). (Pubitemid 32545387)
    • (2001) Trends in Genetics , vol.17 , Issue.7 , pp. 407-413
    • Emahazion, T.1    Feuk, L.2    Jobs, M.3    Sawyer, S.L.4    Fredman, D.5    St Clair, D.6    Prince, J.A.7    Brookes, A.J.8
  • 5
    • 0038098442 scopus 로고    scopus 로고
    • An experimental study of an opportunistic index
    • Ferragina, P., Manzini, G.: An experimental study of an opportunistic index. In: SODA, pp. 269-278 (2001).
    • (2001) SODA , pp. 269-278
    • Ferragina, P.1    Manzini, G.2
  • 6
    • 0033690274 scopus 로고    scopus 로고
    • Compressed suffix arrays and suffix trees with applications to text indexing and string matching
    • Grossi, R., Vitter, J.S.: Compressed suffix arrays and suffix trees with applications to text indexing and string matching. In: STOC, pp. 397-406 (2000).
    • (2000) STOC , pp. 397-406
    • Grossi, R.1    Vitter, J.S.2
  • 9
    • 40749108125 scopus 로고    scopus 로고
    • Compressed indexing and local alignment of DNA
    • DOI 10.1093/bioinformatics/btn032
    • Lam, T.W., Sung, W.K., Tam, S.L., Wong, C.K., Yiu, S.M.: Compressed indexing and local alignment of DNA. Bioinformatics 24(6), 791-797 (2008). (Pubitemid 351386917)
    • (2008) Bioinformatics , vol.24 , Issue.6 , pp. 791-797
    • Lam, T.W.1    Sung, W.K.2    Tam, S.L.3    Wong, C.K.4    Yiu, S.M.5
  • 10
    • 18844405663 scopus 로고    scopus 로고
    • Space-efficient whole genome comparisons with Burrows-Wheeler transforms
    • DOI 10.1089/cmb.2005.12.407
    • Lippert, R.A.: Space-efficient whole genome comparisons with Burrows-Wheeler transforms. Journal of Computational Biology 12(4), 407-415 (2005). (Pubitemid 40696479)
    • (2005) Journal of Computational Biology , vol.12 , Issue.4 , pp. 407-415
    • Lippert, R.A.1
  • 11
    • 33746044836 scopus 로고    scopus 로고
    • Succinct suffix arrays based on run-length encoding
    • Mäkinen, V., Navarro, G.: Succinct suffix arrays based on run-length encoding. Nordic Journal of Computing 12(1), 40-66 (2005).
    • (2005) Nordic Journal of Computing , vol.12 , Issue.1 , pp. 40-66
    • Mäkinen, V.1    Navarro, G.2
  • 12
    • 67650318250 scopus 로고    scopus 로고
    • Storage and retrieval of individual genomes
    • Batzoglou, S. (ed.), LNCS, Springer, Heidelberg
    • Mäkinen, V., Navarro, G., Sirén, J., Välimäki, N.: Storage and retrieval of individual genomes. In: Batzoglou, S. (ed.) RECOMB 2009. LNCS, vol. 5541, pp. 121-137. Springer, Heidelberg (2009).
    • (2009) RECOMB 2009 , vol.5541 , pp. 121-137
    • Mäkinen, V.1    Navarro, G.2    Sirén, J.3    Välimäki, N.4
  • 13
    • 84867930206 scopus 로고    scopus 로고
    • Orthogonal range searching in linear and almost-linear space
    • Nekrich, Y.: Orthogonal range searching in linear and almost-linear space. Computational Geometry: Theory and Applications 42(4), 342-351 (2009).
    • (2009) Computational Geometry: Theory and Applications , vol.42 , Issue.4 , pp. 342-351
    • Nekrich, Y.1
  • 14
    • 79956327951 scopus 로고
    • Probabilistic analysis of generalized suffix trees
    • Szpankowski, W.: Probabilistic analysis of generalized suffix trees. In: CPM, pp. 1-14 (1992).
    • (1992) CPM , pp. 1-14
    • Szpankowski, W.1


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