-
1
-
-
58149253310
-
On the utility of gene set methods in genomewide association studies of quantitative traits
-
Chasman DI: On the utility of gene set methods in genomewide association studies of quantitative traits. Genet Epidemiol 2008; 32: 658-668.
-
(2008)
Genet Epidemiol
, vol.32
, pp. 658-668
-
-
Chasman, D.I.1
-
2
-
-
77449140764
-
Gene and pathway-based second-wave analysis of genome-wide association studies
-
Peng G, Luo L, Siu H et al: Gene and pathway-based second-wave analysis of genome-wide association studies. Eur J Hum Genet 2010; 18: 111-117.
-
(2010)
Eur J Hum Genet
, vol.18
, pp. 111-117
-
-
Peng, G.1
Luo, L.2
Siu, H.3
-
3
-
-
77953429324
-
Using prior knowledge and genome-wide association to identify pathways involved in multiple sclerosis
-
Ritchie MD: Using prior knowledge and genome-wide association to identify pathways involved in multiple sclerosis. Genome Med 2009; 1: 65.
-
(2009)
Genome Med
, vol.1
, pp. 65
-
-
Ritchie, M.D.1
-
4
-
-
65549084289
-
Pathway and network-based analysis of genome-wide association studies in multiple sclerosis
-
Baranzini SE, Galwey NW, Wang J et al: Pathway and network-based analysis of genome-wide association studies in multiple sclerosis. Hum Mol Genet 2009; 18: 2078-2090.
-
(2009)
Hum Mol Genet
, vol.18
, pp. 2078-2090
-
-
Baranzini, S.E.1
Galwey, N.W.2
Wang, J.3
-
5
-
-
71249084067
-
A pathway analysis applied to genetic analysis workshop 16 genome-wide rheumatoid arthritis data
-
Ballard DH, Aporntewan C, Lee JY, Lee JS, Wu Z, Zhao H: A pathway analysis applied to genetic analysis workshop 16 genome-wide rheumatoid arthritis data. BMC Proc 2009; 3(Suppl 7): S91.
-
(2009)
BMC Proc
, vol.3
, Issue.SUPPL. 7
-
-
Ballard, D.H.1
Aporntewan, C.2
Lee, J.Y.3
Lee, J.S.4
Wu, Z.5
Zhao, H.6
-
6
-
-
61549115034
-
Diverse genome-wide association studies associate the IL12/IL23 pathway with Crohn Disease
-
Wang K, Zhang H, Kugathasan S et al: Diverse genome-wide association studies associate the IL12/IL23 pathway with Crohn Disease. Am J Hum Genet 2009; 84: 399-405.
-
(2009)
Am J Hum Genet
, vol.84
, pp. 399-405
-
-
Wang, K.1
Zhang, H.2
Kugathasan, S.3
-
7
-
-
36249029788
-
Pathway-based approaches for analysis of genomewide association studies
-
DOI 10.1086/522374
-
Wang K, Li M, Bucan M: Pathway-based approaches for analysis of genomewide association studies. Am J Hum Genet 2007; 81: 1278-1283. (Pubitemid 350211456)
-
(2007)
American Journal of Human Genetics
, vol.81
, Issue.6
, pp. 1278-1283
-
-
Wang, K.1
Li, M.2
Bucan, M.3
-
8
-
-
33947661925
-
Evidence for association between multiple complement pathway genes and AMD
-
DOI 10.1002/gepi.20204
-
Dinu V, Miller PL, Zhao H: Evidence for association between multiple complement pathway genes and AMD. Genet Epidemiol 2007; 31: 224-237. (Pubitemid 46493566)
-
(2007)
Genetic Epidemiology
, vol.31
, Issue.3
, pp. 224-237
-
-
Dinu, V.1
Miller, P.L.2
Zhao, H.3
-
9
-
-
12744259874
-
Identifying SNPs predictive of phenotype using random forests
-
Bureau A, Dupuis J, Falls K et al: Identifying SNPs predictive of phenotype using random forests. Genet Epidemiol 2005; 28: 171-182.
-
(2005)
Genet Epidemiol
, vol.28
, pp. 171-182
-
-
Bureau, A.1
Dupuis, J.2
Falls, K.3
-
10
-
-
53349100175
-
Pathway analysis of single-nucleotide polymorphisms potentially associated with glioblastoma multiforme susceptibility using random forests
-
Chang JS, Yeh RF, Wiencke JK et al: Pathway analysis of single-nucleotide polymorphisms potentially associated with glioblastoma multiforme susceptibility using random forests. Cancer Epidemiol Biomarkers Prev 2008; 17: 1368-1373.
-
(2008)
Cancer Epidemiol Biomarkers Prev
, vol.17
, pp. 1368-1373
-
-
Chang, J.S.1
Yeh, R.F.2
Wiencke, J.K.3
-
11
-
-
36048987418
-
Integrating domain knowledge with statistical and data mining methods for high-density genomic SNP disease association analysis
-
DOI 10.1016/j.jbi.2007.06.002, PII S1532046407000548, Intelligent Data Analysis in Biomedicine
-
Dinu V, Zhao H, Miller P et al: Integrating domain knowledge with statistical and data mining methods for high-density genomic SNP disease association analysis. J Biomed Inform 2007; 40: 750-760. (Pubitemid 350088621)
-
(2007)
Journal of Biomedical Informatics
, vol.40
, Issue.6
, pp. 750-760
-
-
Dinu, V.1
Zhao, H.2
Miller, P.L.3
-
12
-
-
34547863496
-
Assessment of survival prediction models based on microarray data
-
DOI 10.1093/bioinformatics/btm232
-
Schumacher M, Binder H, Gerds T: Assessment of survival prediction models based on microarray data. Bioinformatics 2007; 23: 1768-1774. (Pubitemid 47250309)
-
(2007)
Bioinformatics
, vol.23
, Issue.14
, pp. 1768-1774
-
-
Schumacher, M.1
Binder, H.2
Gerds, T.3
-
14
-
-
77950510575
-
Pathway analysis using random forests with bivariate node-split for survival outcomes
-
Pang H, Datta D, Zhao H: Pathway analysis using random forests with bivariate node-split for survival outcomes. Bioinformatics 2010; 26: 250-258.
-
(2010)
Bioinformatics
, vol.26
, pp. 250-258
-
-
Pang, H.1
Datta, D.2
Zhao, H.3
-
16
-
-
0038457682
-
On the exact distribution of maximally selected rank statistics
-
PII S0167947302002256
-
Hothorn T, Lausen B: On the exact distribution of maximally selected rank statistics. Comput Stat Data Anal 2003; 43: 121-137. (Pubitemid 36715216)
-
(2003)
Computational Statistics and Data Analysis
, vol.43
, Issue.2
, pp. 121-137
-
-
Hothorn, T.1
Lausen, B.2
-
17
-
-
0023942063
-
Regression trees for censored data
-
Segal M: Regression trees for censored data. Biometrics 1988; 44: 35-47. (Pubitemid 18098810)
-
(1988)
Biometrics
, vol.44
, Issue.1
, pp. 35-47
-
-
Segal, M.R.1
-
18
-
-
33644874819
-
From genomics to chemical genomics: New developments in KEGG
-
Kanehisa M, Goto S, Hattori M et al: From genomics to chemical genomics: new developments in KEGG. Nucleic Acids Res 2006; 34: D354-D357.
-
(2006)
Nucleic Acids Res
, vol.34
-
-
Kanehisa, M.1
Goto, S.2
Hattori, M.3
-
19
-
-
19944372078
-
Generating survival times to simulate Cox proportional hazards models
-
DOI 10.1002/sim.2059
-
Bender R, Augustin T, Blettner M: Generating survival times to simulate Cox proportional hazards models. Stat Med 2005; 24: 1713-1723. (Pubitemid 40754090)
-
(2005)
Statistics in Medicine
, vol.24
, Issue.11
, pp. 1713-1723
-
-
Bender, R.1
Augustin, T.2
Blettner, M.3
-
20
-
-
35348983887
-
A second generation human haplotype map of over 3.1 million SNPs
-
International HapMap Consortium
-
International HapMap Consortium: A second generation human haplotype map of over 3.1 million SNPs. Nature 2007; 449: 851-861.
-
(2007)
Nature
, vol.449
, pp. 851-861
-
-
-
21
-
-
62649155943
-
A unified approach to genotype imputation and haplotype phase inference for large data sets of trios and unrelated individuals
-
Browning BL, Browning SR: A unified approach to genotype imputation and haplotype phase inference for large data sets of trios and unrelated individuals. Am J Hum Genet 2009; 84: 210-223.
-
(2009)
Am J Hum Genet
, vol.84
, pp. 210-223
-
-
Browning, B.L.1
Browning, S.R.2
-
22
-
-
60549116311
-
A comprehensive evaluation of SNP genotype imputation
-
Nothnagel M, Ellinghaus D, Schreiber S, Krawczak M, Franke A: A comprehensive evaluation of SNP genotype imputation. Hum Genet 2009; 125: 163-171.
-
(2009)
Hum Genet
, vol.125
, pp. 163-171
-
-
Nothnagel, M.1
Ellinghaus, D.2
Schreiber, S.3
Krawczak, M.4
Franke, A.5
-
23
-
-
74549190701
-
Prognostic significance of copy-number alterations in multiple myeloma
-
Avet-Loiseau H, Li C, Magrangeas F et al: Prognostic significance of copy-number alterations in multiple myeloma. J Clin Oncol 2009; 27: 4585-4590.
-
(2009)
J Clin Oncol
, vol.27
, pp. 4585-4590
-
-
Avet-Loiseau, H.1
Li, C.2
Magrangeas, F.3
-
24
-
-
0042424602
-
Statistical significance for genome-wide studies
-
Storey JD, Tibshirani R: Statistical significance for genome-wide studies. PNAS 2003; 100: 9440-9445.
-
(2003)
PNAS
, vol.100
, pp. 9440-9445
-
-
Storey, J.D.1
Tibshirani, R.2
-
25
-
-
34347208347
-
Mapping genes that contribute to daunorubicin-induced cytotoxicity
-
DOI 10.1158/0008-5472.CAN-06-4431
-
Duan S, Bleibel WK, Huang RS et al: Mapping genes that contribute to daunorubicininduced cytotoxicity. Cancer Res 2007; 67: 5425-5433. (Pubitemid 46997283)
-
(2007)
Cancer Research
, vol.67
, Issue.11
, pp. 5425-5433
-
-
Duan, S.1
Bleibel, W.K.2
Huang, R.S.3
Shukla, S.J.4
Wu, X.5
Badner, J.A.6
Dolan, M.E.7
-
26
-
-
45149108420
-
Mapping the genetic architecture of gene expression in human liver
-
Schadt EE, Molony C, Chudin E et al: Mapping the genetic architecture of gene expression in human liver. Plos Biol 2008; 6: e107.
-
(2008)
Plos Biol
, vol.6
-
-
Schadt, E.E.1
Molony, C.2
Chudin, E.3
-
27
-
-
0038370952
-
A review of the cytokine network in multiple myeloma: Diagnostic, prognostic, and therapeutic implications
-
DOI 10.1002/cncr.11072
-
Lauta VM: A review of the cytokine network in multiple myeloma: diagnostic, prognostic, and therapeutic implications. Cancer 2003; 97: 2440-2452. (Pubitemid 36542483)
-
(2003)
Cancer
, vol.97
, Issue.10
, pp. 2440-2452
-
-
Lauta, V.M.1
-
29
-
-
55249115329
-
Caspase polymorphisms and genetic susceptibility to multiple myeloma
-
Hosgood III HD, Baris D, Zhang Y et al: Caspase polymorphisms and genetic susceptibility to multiple myeloma. Hematol Oncol 2008; 26: 148-151.
-
(2008)
Hematol Oncol
, vol.26
, pp. 148-151
-
-
Hosgood Iii, H.D.1
Baris, D.2
Zhang, Y.3
-
30
-
-
23944486422
-
Honokiol overcomes conventional drug resistance in human multiple myeloma by induction of caspase-dependent and -independent apoptosis
-
DOI 10.1182/blood-2005-01-0346
-
Ishitsuka K, Hideshima T, Hamasaki M et al: Honokiol overcomes conventional drug resistance in human multiple myeloma by induction of caspase-dependent and -independent apoptosis. Blood 2005; 106: 1794-1800. (Pubitemid 41208596)
-
(2005)
Blood
, vol.106
, Issue.5
, pp. 1794-1800
-
-
Ishitsuka, K.1
Hideshima, T.2
Hamasaki, M.3
Raje, N.4
Kumar, S.5
Hideshima, H.6
Shiraishi, N.7
Yasui, H.8
Roccaro, A.M.9
Richardson, P.10
Podar, K.11
Le Gouill, S.12
Chauhan, D.13
Tamura, K.14
Arbiser, J.15
Anderson, K.C.16
-
31
-
-
1542263998
-
Caspase activation is required for gemcitabine activity in multiple myeloma cell lines
-
Nabhan C, Gajria D, Krett NL, Gandhi V, Ghias K, Rosen ST: Caspase activation is required for gemcitabine activity in multiple myeloma cell lines. Mol Cancer Ther 2002; 1: 1221-1227.
-
(2002)
Mol Cancer Ther
, vol.1
, pp. 1221-1227
-
-
Nabhan, C.1
Gajria, D.2
Krett, N.L.3
Gandhi, V.4
Ghias, K.5
Rosen, S.T.6
-
32
-
-
47249149755
-
Analysis of a large multi-generational family provides insight into the genetics of chronic lymphocytic leukemia
-
DOI 10.1111/j.1365-2141.2008.07188.x
-
Fuller SJ, Papaemmanuil E, McKinnon L et al: Analysis of a large multi-generational family provides insight into the genetics of chronic lymphocytic leukemia. Br J Haematol 2008; 142: 238-245. (Pubitemid 351987326)
-
(2008)
British Journal of Haematology
, vol.142
, Issue.2
, pp. 238-245
-
-
Fuller, S.J.1
Papaemmanuil, E.2
McKinnon, L.3
Webb, E.4
Sellick, G.S.5
Dao-Ung, L.-P.6
Skarratt, K.K.7
Crowther, D.8
Houlston, R.S.9
Wiley, J.S.10
-
33
-
-
33644861751
-
New treatment strategies for multiple myeloma by targeting BCL-2 and the mevalonate pathway
-
Van de Donk NW, Bloem AC, Van der Spek E, Lokhorst HM: New treatment strategies for multiple myeloma by targeting BCL-2 and the mevalonate pathway. Curr Pharm Des 2006; 12: 327-340.
-
(2006)
Curr Pharm des
, vol.12
, pp. 327-340
-
-
Van De Donk, N.W.1
Bloem, A.C.2
Van Der Spek, E.3
Lokhorst, H.M.4
-
34
-
-
33846495529
-
Molecular characterization of human multiple myeloma cell lines by integrative genomics: Insights into the biology of the disease
-
DOI 10.1002/gcc.20404
-
Lombardi L, Poretti G, Mattioli M et al: Molecular characterization of human multiple myeloma cell lines by integrative genomics: insights into the biology of the disease. Genes Chromosomes Cancer 2007; 46: 226-238. (Pubitemid 46155318)
-
(2007)
Genes Chromosomes and Cancer
, vol.46
, Issue.3
, pp. 226-238
-
-
Lombardi, L.1
Poretti, G.2
Mattioli, M.3
Fabris, S.4
Agnelli, L.5
Bicciato, S.6
Kwee, I.7
Rinaldi, A.8
Ronchetti, D.9
Verdelli, D.10
Lambertenghi-Deliliers, G.11
Bertoni, F.12
Neri, A.13
-
35
-
-
33645769276
-
High-resolution genomic profiles define distinct clinico-pathogenetic subgroups of multiple myeloma patients
-
Carrasco DR, Tonon G, Huang Y et al: High-resolution genomic profiles define distinct clinico-pathogenetic subgroups of multiple myeloma patients. Cancer Cell 2006; 9: 313-325.
-
(2006)
Cancer Cell
, vol.9
, pp. 313-325
-
-
Carrasco, D.R.1
Tonon, G.2
Huang, Y.3
-
36
-
-
0033121314
-
Role of NF-κB in the rescue of multiple myeloma cells from glucocorticoid-induced apoptosis by bcl-2
-
Feinman R, Koury J, Thames M, Barlogie B, Epstein J, Siegel DS: Role of NF-kappaB in the rescue of multiple myeloma cells from glucocorticoid-induced apoptosis by bcl-2. Blood 1999; 93: 3044-3052. (Pubitemid 29200797)
-
(1999)
Blood
, vol.93
, Issue.9
, pp. 3044-3052
-
-
Feinman, R.1
Koury, J.2
Thames, M.3
Barlogie, B.4
Epstein, J.5
Siegel, D.S.6
-
37
-
-
55949134663
-
Infusion of haplo-identical killer immunoglobulinlike receptor ligand mismatched NK cells for relapsed myeloma in the setting of autologous stem cell transplantation
-
Shi J, Tricot G, Szmania S et al: Infusion of haplo-identical killer immunoglobulinlike receptor ligand mismatched NK cells for relapsed myeloma in the setting of autologous stem cell transplantation. Br J Haematol 2008; 143: 641-653.
-
(2008)
Br J Haematol
, vol.143
, pp. 641-653
-
-
Shi, J.1
Tricot, G.2
Szmania, S.3
-
38
-
-
0034651023
-
Expression of functional interleukin-15 receptor and autocrine production of interleukin-15 as mechanisms of tumor propagation in multiple myeloma
-
Tinhofer I, Marschitz I, Henn T, Egle A, Greil R: Expression of functional interleukin-15 receptor and autocrine production of interleukin-15 as mechanisms of tumor propagation in multiple myeloma. Blood 2000; 95: 610-618. (Pubitemid 30041677)
-
(2000)
Blood
, vol.95
, Issue.2
, pp. 610-618
-
-
Tinhofer, I.1
Marschitz, I.2
Henn, T.3
Egle, A.4
Greil, R.5
-
39
-
-
34247869006
-
Serum levels of Interleukin-15 and Interleukin-10 and their correlation with proliferating cell nuclear antigen in multiple myeloma
-
DOI 10.1016/j.cyto.2007.02.022, PII S1043466607000361
-
Pappa C, Miyakis S, Tsirakis G et al: Serum levels of interleukin-15 and interleukin-10 and their correlation with proliferating cell nuclear antigen in multiple myeloma. Cytokine 2007; 37: 171-175. (Pubitemid 46694336)
-
(2007)
Cytokine
, vol.37
, Issue.2
, pp. 171-175
-
-
Pappa, C.1
Miyakis, S.2
Tsirakis, G.3
Sfiridaki, A.4
Alegakis, A.5
Kafousi, M.6
Stathopoulos, E.N.7
Alexandrakis, M.G.8
-
40
-
-
0347626018
-
Interleukin-18 in multiple myeloma patients: Serum levels in relation to response to treatment and survival
-
DOI 10.1016/S0145-2126(03)00261-3
-
Alexandrakis MG, Passam FH, Sfiridaki K et al: Interleukin-18 in multiple myeloma patients: serum levels in relation to response to treatment and survival. Leuk Res 2004; 28: 259-266. (Pubitemid 37550060)
-
(2004)
Leukemia Research
, vol.28
, Issue.3
, pp. 259-266
-
-
Alexandrakis, M.G.1
Passam, F.H.2
Sfiridaki, K.3
Moschandrea, J.4
Pappa, C.5
Liapi, D.6
Petreli, E.7
Roussou, P.8
Kyriakou, D.S.9
-
41
-
-
0036835015
-
Interleukin-18 inhibits lodging and subsequent growth of human multiple myeloma cells in the bone marrow
-
Yamashita K, Iwasaki T, Tsujimura T et al: Interleukin-18 inhibits lodging and subsequent growth of human multiple myeloma cells in the bone marrow. Oncol Rep 2002; 9: 1237-1244.
-
(2002)
Oncol Rep
, vol.9
, pp. 1237-1244
-
-
Yamashita, K.1
Iwasaki, T.2
Tsujimura, T.3
-
42
-
-
12444311696
-
Biphasic anti-osteoclastic action of intravenous alendronate therapy in multiple myeloma bone disease
-
Kitano M, Ogata A, Sekiguchi M, Hamano T, Sano H: Biphasic anti-osteoclastic action of intravenous alendronate therapy in multiple myeloma bone disease. J Bone Miner Metab 2005; 23: 48-52.
-
(2005)
J Bone Miner Metab
, vol.23
, pp. 48-52
-
-
Kitano, M.1
Ogata, A.2
Sekiguchi, M.3
Hamano, T.4
Sano, H.5
-
43
-
-
34247486952
-
Common variants in genes that mediate immunity and risk of multiple myeloma
-
DOI 10.1002/ijc.22618
-
Brown EE, Lan Q, Zheng T et al: Common variants in genes that mediate immunity and risk of multiple myeloma. Int J Cancer 2007; 120: 2715-2722. (Pubitemid 46651296)
-
(2007)
International Journal of Cancer
, vol.120
, Issue.12
, pp. 2715-2722
-
-
Brown, E.E.1
Lan, Q.2
Zheng, T.3
Zhang, Y.4
Wang, S.S.5
Hoar-Zahm, S.6
Chanock, S.J.7
Rothman, N.8
Baris, D.9
-
44
-
-
77953351710
-
An application of Random Forests to a genome-wide association dataset: Methodological considerations & new findings
-
Goldstein B, Hubbard A, Cutler A, Barcellos L: An application of Random Forests to a genome-wide association dataset: methodological considerations & new findings. BMC Genet 2010; 11: 49.
-
(2010)
BMC Genet
, vol.11
, pp. 49
-
-
Goldstein, B.1
Hubbard, A.2
Cutler, A.3
Barcellos, L.4
-
46
-
-
0029150074
-
A comparison of linkage disequilibrium measures for fine-mapping
-
Devlin B, Risch N: A comparison of linkage disequilibrium measures for fine-mapping. Genomics 1995; 29: 311-322.
-
(1995)
Genomics
, vol.29
, pp. 311-322
-
-
Devlin, B.1
Risch, N.2
-
47
-
-
64549095229
-
Performance of random forest when SNPs are in linkage disequilibrium
-
Meng Y, Yu Y, Cupples L, Farrer L, Lunetta K: Performance of random forest when SNPs are in linkage disequilibrium. BMC Bioinformatics 2009; 10: 78.
-
(2009)
BMC Bioinformatics
, vol.10
, pp. 78
-
-
Meng, Y.1
Yu, Y.2
Cupples, L.3
Farrer, L.4
Lunetta, K.5
-
48
-
-
70149101114
-
Using genome-wide pathway analysis to unravel the etiology of complex diseases
-
Elbers C, Van Eijk K, Franke L et al: Using genome-wide pathway analysis to unravel the etiology of complex diseases. Genet Epidemiol 2009; 33: 419-431.
-
(2009)
Genet Epidemiol
, vol.33
, pp. 419-431
-
-
Elbers, C.1
Van Eijk, K.2
Franke, L.3
|