Molecular data reveal high host specificity in the phylogenetically isolated genus Massaria (Ascomycota, Massariaceae)

Fungal Diversity

Volumn 46, Issue , 2011, Pages 133-170

  Voglmayr, Hermann ^a   Jaklitsch, Walter M ^a  

^a UNIVERSITY OF VIENNA   (Austria)

Author keywords

Aglaospora; Dothideomycetes; Massariaceae; Molecular phylogeny; New species . Pathogen; Pleosporales; Systematics

Indexed keywords

ACER; AGLAOSPORA; ASCOMYCOTA; DOTHIDEOMYCETES; GIGASPORA; MASSARIA; MASSARIACEAE; MASSARINA; PLEOSPORALES; ROSACEAE;

EID: 79955845307     PISSN: 15602745     EISSN: 18789129     Source Type: Journal    
DOI: 10.1007/s13225-010-0078-5     Document Type: Article

References (73)

1. Aptroot A (1991) A monograph of the Pyrenulaceae (excluding Anthracothecium and Pyrenula) and the Requienellaceae, with notes on the Pleomassariaceae, the Trypetheliaceae and Mycomicrothelia. Bibl Lichenol 44:1-178
2. Aptroot A (1998) A world revision of Massarina (Ascomycota). Nova Hedwig 66:89-162 (Pubitemid 28151086)
3. Barr ME (1979) On the Massariaceae in North America. Mycotaxon 9:17-37
4. Barr ME (1990) V. Massariaceae. In North American Flora, ser. II (13): Melanommatales (Loculoascomycetes). New York Botanical Garden, New York, pp 66-82
5. Berkeley MJ (1876) Notices of North American fungi. Grevillea 4 (32):141-162 [nos 903-1005]
6. Cesati V, De Notaris G (1863) Schema di classificazione degli sferiacei Italici aschigeri piu o meno appartenenti al genere Sphaeria nell' antico significato attribuitogli de Persoon. Comment. Soc. Crittogamol. Ital. 1(4):177-240
7. Chaverri P, Samuels GJ (2003) Hypocrea/Trichoderma (Ascomycota, Hypocreales, Hypocreaceae): species with green ascospores. Stud Mycol 48:1-116
8. Chen CY, Hsieh WH (1996) New records of Ascomycetes from Taiwan. Fungal Sci 11:17-29
9. De Notaris G (1844) Cenni sulla tribù dei Pirenomiceti sferiacei e descrizione di alcuni generi spettanti alla medesima. G Bot Ital 1:322-335
10. Del Prado R, Schmitt I, Kautz S, Palice Z, Lücking R, Lumbsch HT (2006) Molecular data place Trypetheliaceae in Dothideomycetes. Mycol Res 110:511-520 (Pubitemid 44069567)
11. Edgar RC (2004) MUSCLE: multiple sequence alignment with high accuracy and high throughput. Nucleic Acids Res 32:1792-1797 (Pubitemid 38832724)
12. Ellis JB, Everhart BM (1892) The North American Pyrenomycetes. Newfield
13. Eriksson OE (1981) The families of bitunicate ascomycetes. Opera Bot 60:1-220
14. Eriksson OE (1989). NaClO, sodium hypochlorite, a powerful agent in studies of ascospore morphology. Syst Ascomycetum 8:29-57
15. Eriksson OE, Hawksworth DL (1986) Notes on ascomycete systematics. Nos. 1-224. Syst Ascomycetum 5:113-174
16. Eriksson OE, Baral HO, Currah RS, Hansen K, Kurtzman CP, Rambold G, Laessøe T (2001) Outline of Ascomycota - 2001. Myconet 7:1-88
17. Fries EM (1823) Systema mycologicum, sistens fungorum ordines, genera et species hucusque cognitas, quas ad normam methodi naturalis determinavit, disposuit atque descripsit 2. Mauritius, Greifswald
18. Fuckel KWGL (1873) Symbolae Mycologicae. Zweiter Nachtrag. Jahrb Nassau Ver Naturkd 27-28:1-99 ['1874']
19. Geiser DM, Gueidan C, Miadlikowska J, Lutzoni F, Kauff F, Hofstetter V, Fraker E, Schoch C, Tibell L, Untereiner WA, Aptroot A (2006) Eurotiomycetes: Eurotiomycetidae and Chaetothyriomycetidae. Mycologia 98:1054-1065
20. Hall TA (1999) BioEdit: a user-friendly biological sequence alignment editor and analysis. program for Windows 95/98/NT. Nucleic Acids Symp Ser 41:95-98
21. Harris RC (1986) The family Trypetheliaceae (Loculoascomycetes: lichenized Melanommatales) in Amazonian Brazil. Acta Amazon Supl 14:55-80
22. Harris RC (1989) A sketch of the family Pyrenulaceae (Melanommatales) in Eastern North America. Mem N Y Bot Gard 49:74-107
23. Hazslinsky von Hazslin FA (1892) Magyarországés társországainak sphaeriái. Mathematikai és Természettudimányi Közlemények Vonatkozólag a Hazai Vizsonyokra 25(2):333, 15 tabs
24. Hein B (1984) Originalmaterial und Hinweise zu den von G. Otth beschriebenen Fungi-Arten und subspezifischen Taxa imHerbar des Botanischen Museums Berlin-Dahlem. Willdenowia 14:413-416
25. Hibbett DS, Binder M, Bischoff JF, Blackwell M, Cannon PF, Eriksson OE, Huhndorf S, James T, Kirk PM, Lücking R, Lumbsch HT, Lutzoni F, Matheny PB, McLaughlin DJ, Powell MJ, Redhead S, Schoch CL, Spatafora JW, Stalpers JA, Vilgalys R, Aime MC, Aptroot A, Bauer R, Begerow D, Benny GL, Castlebury LA, Crous PW, Dai YC, Gams W, Geiser DM, Griffith GW, Gueidan C, Hawksworth DL, Hestmark G, Hosaka K, Humber RA, Hyde KD, Ironside JE, Kõljalg U, Kurtzman CP, Larsson KH, Lichtwardt R, Longcore J, Miadlikowska J, Miller A, Moncalvo JM, Mozley- Standridge S, Oberwinkler F, Parmasto E, Reeb V, Rogers JD, Roux C, Ryvarden L, Sampaio JP, Schüssler A, Sugiyama J, Thorn RG, Tibell L, Untereiner WA, Walker C, Wang Z, Weir A, Weiss M, White MM, Winka K, Yao YJ, Zhang N (2007) A higher-level phylogenetic classification of the Fungi. Mycol Res 111:509-547 (Pubitemid 46915419)
26. de Hoog GS, Gerrits van den Ende AHG (1998) Molecular diagnostics of clinical strains of filamentous Basidiomycetes. Mycoses 41:183-189 (Pubitemid 28356893)
27. Huelsenbeck JP, Ronquist F (2001) MRBAYES: Bayesian inference of phylogenetic trees. Bioinformatics 17:754-755 (Pubitemid 32851390)
28. Hyde KD, Zhang Y (2008) Epitypification: should we epitypify? Journal of Zhejiang University, Science B 9(10):842-846
29. Jaklitsch WM (2009) European species of Hypocrea Part I. The greenspored species. Stud Mycol 63:1-91
30. Jaklitsch WM, Voglmayr H (2011) Nectria eustromatica sp. nov., an exceptional species with a hypocreaceous stroma. Mycologia 103 (in press)
31. Jaklitsch WM, Komon M, Kubicek CP, Druzhinina IS (2006) Hypocrea voglmayrii sp. nov. from the Austrian Alps represents a new phylogenetic clade in Hypocrea/Trichoderma. Mycologia 97:1365-1378 ['2005'] (Pubitemid 43724869)
32. Kauff F, Lutzoni F (2002) Phylogeny of Gyalectales and Ostropales (Ascomycota, Fungi): among and within order relationships based on nuclear ribosomal RNA small and large subunits. Mol Phylogenet Evol 25:138-156 (Pubitemid 35169398)
33. Kruys Å, Eriksson OE, Wedin M (2006) Phylogenetic relationships of coprophilous Pleosporales (Dothideomycetes, Ascomycota), and the classification of some bitunicate taxa of unknown position. Mycol Res 110:527-536 (Pubitemid 44061668)
34. Landvik S, Egger K, Schumacher T (1997) Towards a subordinal classification of the Pezizales (Ascomycota): phylogenetic analyses of SSU rDNA sequences. Nord J Bot 17:403-418 (Pubitemid 27528390)
35. Liu YL, Whelen S, Hall BD (1999) Phylogenetic relationships among ascomycetes: evidence from an RNA polymerase II subunit. Mol Biol Evol 16:1799-1808
36. Luck-Allen ER, Cain RF (1975) Additions to the genus Delitschia. Can J Bot 53:1827-1887
37. Lumbsch HT, Huhndorf SM (ed) (2007) Outline of Ascomycota - 2007. Myconet 13:1-58
38. Michalopoulos-Skarmoutsos H, Skarmoutsos G (1999) Pathogenicity of fungi affecting black locust (Robinia pseudoacacia) in Greece. Phytoparasitica 27:233-234
39. Miyake I (1916) On the fungi inhabiting mulberry tree (in Japanese). Tech. Rep. Imp. Sericult. Exp. Stat. 1:301-361
40. Nylander JA, Wilgenbusch JC, Warren DL, Swofford DL (2008) AWTY (are we there yet?): a system for graphical exploration of MCMC convergence in Bayesian phylogenetics. Bioinformatics 24:581-583 (Pubitemid 351256305)
41. Otth G (1869) Sechster Nachtrag zu dem in Nr. 15-23 der Mittheilungen enthaltenen Verzeichnisse schweizerischer Pilze. Mitth Natforsch Ges Bern 1868:37-70
42. Petrak F (1921) Mykologische Notizen. II. Anns Mycol 19:17-128
43. Réblová M, Svrček M (1997) New records of Pyrenomycetes from the Czech Republic I. Czech Mycol 49:193-206
44. Riethmüller A, Voglmayr H, Göker M, Weiß M, Oberwinkler F (2002) Phylogenetic relationships of the downy mildews (Peronosporales) and related groups based on nuclear large subunit ribosomal DNA sequences. Mycologia 94:834-849 (Pubitemid 36171580)
45. Rossman AY, Samuels GJ, Rogerson CT, Lowen R (1999) Genera of Bionectriaceae, Hypocreaceae and Nectriaceae (Hypocreales, Ascomycetes). Stud Mycol 42:1-248
46. Saccardo PA (1877) Fungi Veneti novi vel critici vel mycologiae Venetae addendi. Series VI. Michelia 1:1-72
47. Saccardo PA (1878) Fungi Italici Autographice Delineati. Fascs 9-12: tabs 321-480.
48. Padova Schoch CL, Shoemaker RA, Seifert KA, Hambleton S, Spatafora JW, Crous PW (2006) A multigene phylogeny of the Dothideomycetes using four nuclear loci. Mycologia 98:1041-1052 (Pubitemid 46683225)
49. Schoch CL, Crous PW, Groenewald JZ, Boehm EWA, Burgess TI, de Gruyter J, de Hoog GS, Dixon LJ, Grube M, Gueidan C, Harada Y, Hatakeyama S, Hirayama K, Hosoya T, Huhndorf SM, Hyde KD, Jones EBG, Kohlmeyer J, Kruys Å, Li YM, Lücking R, Lumbsch HT, Marvanová L, Mbatchou JS, McVay AH, Miller AN, Mugambi GK, Muggia L, Nelsen MP, Nelson P, Owensby CA, Phillips AJL, Phongpaichit S, Pointing SB, Pujade-Renaud V, Raja HA, Rivas Plata E, Robbertse B, Ruibal C, Sakayaroj J, Sano T, Selbmann L, Shearer CA, Shirouzu T, Slippers B, Suetrong S, Tanaka K, Volkmann-Kohlmeyer B, Wingfield MJ, Wood AR, Woudenberg JHC, Yonezawa H, Zhang Y, Spatafora JW (2009) A class-wide phylogenetic assessment of Dothideomycetes. Stud Mycol 64:1-15
50. Shoemaker RA, Kokko EG (1977a) Aglaospora profusa. Fungi Canadenses No. 101. National Mycological Herbarium, Ottawa
51. Shoemaker RA, Kokko EG (1977b) Massaria inquinans. Fungi Canadenses No. 104. National Mycological Herbarium, Ottawa
52. Shoemaker RA, Kokko EG (1977c) Massaria lantanae. Fungi Canadenses No. 105. National Mycological Herbarium, Ottawa
53. Shoemaker RA, Kokko EG (1977d) Massaria zanthoxyli. Fungi Canadenses No. 106. National Mycological Herbarium, Ottawa
54. Shoemaker RA, LeClair PM (1975) Type studies of Massaria from the Wehmeyer collection. Can J Bot 53:1568-1598
55. Søchting U, Lutzoni F (2003) Molecular phylogenetic study at the generic boundary between the lichen-forming fungi Caloplaca and Xanthoria (Ascomycota, Teloschistaceae). Mycol Res 107:1266-1276 (Pubitemid 38231116)
56. Spatafora JW, Mitchell TG, Vilgalys R (1995) Analysis of genes coding for small-subunit rRNA sequences in studying phylogenetics of dematiaceous fungal pathogens. J Clin Microbiol 33:1322-1326
57. Stamatakis E (2006) RAxML-VI-HPC: maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models. Bioinformatics 22:2688-2690
58. Suetrong S, Schoch CL, Spatafora JW, Kohlmeyer J, Volkmann- Kohlmeyer B, Sakayaroj J, Phongpaichit S, Tanaka K, Hirayama K, Jones EBG (2009) Molecular systematics of the marine Dothideomycetes. Stud Mycol 64:155-173
59. Swofford DL (2002) PAUP*: Phylogenetic Analysis Using Parsimony (*and Other Methods), Version 4.0b10. Sinauer Associates, Sunderland, Massachusetts
60. Tanaka T (1917a) New Japanese Fungi. Notes and translations - II. Mycologia 9:249-253
61. Tanaka T (1917b) New Japanese Fungi. Notes and translations - III. Mycologia 9:365-368
62. Tanaka K, OokiY HS, Harada Y, Barr ME (2005) Pleosporales in Japan (5): Pleomassaria, Asteromassaria, and Splanchnonema. Mycoscience 46:248-260 (Pubitemid 41152263)
63. Thiers B (2010) Index Herbariorum: a global directory of public herbaria and associated staff. New York Botanical Garden's Virtual Herbarium. http://sweetgum.nybg.org/ih/
64. Tode F (1791) Fungi Mecklenburgenses selecti, Fasciculus 2. F. Lemke, Lüneburg
65. Treigiene A, Rukšeniene, J (2005) The genus Massaria (Ascomycota) in Lithuania. Bot Lith 111:55-61
66. Vilgalys R, Hester M (1990) Rapid genetic identification and mapping of enzymatically amplified ribosomal DNA from several Cryptococcus species. J Bacteriol 172:4238-4246 (Pubitemid 20236711)
67. Voglmayr H, Jaklitsch WM (2008) Prosthecium species with Stegonsporium anamorphs on Acer. Mycol Res 112:885-905
68. von Schweinitz LD (1832) Synopsis fungorum in America boreali media degentium. Trans Am Philos Soc II 4:141-316
69. Wallroth FW (1833) Flora Cryptogamica Germaniae 2. J. L. Schrag, Nürnberg
70. Wehmeyer LE (1941) A revision of Melanconis, Pseudovalsa, Prosthecium and Titania. Univ. Michigan Stud., Sci. Ser. 14:1-161
71. Werle E, Schneider C, Renner M, Völker M, Fiehn W (1994) Convenient single-step, one tube purification of PCR products for direct sequencing. Nucleic Acids Res 22:4354-4355 (Pubitemid 24322750)
72. White TJ, Bruns T, Lee S, Taylor J (1990) Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics. In: Innis MA, Gelfand DH, Sninsky JJ, White TJ (eds) PCR protocols: a guide to methods and applications. Academic, San Diego, pp 315-322
73. Zhang Y, Schoch CL, Fournier J, Crous PW, de Gruyter J, Woudenberg JHC, Hirayama K, Tanaka K, Pointing SB, Spatafora JW, Hyde KD (2009) Multi-locus phylogeny of the Pleosporales: a taxonomic, ecological and evolutionary reevaluation. Stud Mycol 64:85-102