-
1
-
-
0037094434
-
Nitrogen regulation in saccharomyces cerevisiae
-
Nitrogen regulation in saccharomyces cerevisiae. Gene 290(1-2), 1-18 (2002)
-
(2002)
Gene
, vol.290
, Issue.1-2
, pp. 1-18
-
-
-
2
-
-
0034459542
-
The Level of DAL80 Expression Down-Regulates GATA Factor-Mediated Transcription in Saccharomyces cerevisiae
-
Cunningham, T.S., Rai, R., Cooper, T.G.: The Level of DAL80 Expression Down-Regulates GATA Factor-Mediated Transcription in Saccharomyces cerevisiae. J. Bacteriol. 182(23), 6584-6591 (2000)
-
(2000)
J. Bacteriol.
, vol.182
, Issue.23
, pp. 6584-6591
-
-
Cunningham, T.S.1
Rai, R.2
Cooper, T.G.3
-
3
-
-
0002629270
-
Maximum likelihood from incomplete data via the EM algorithm
-
Dempster, A.P., Laird, N.M., Rubin, D.B.: Maximum likelihood from incomplete data via the EM algorithm. Journal of the Royal Statistical Society. Series B (Methodological) 39(1), 1-38 (1977)
-
(1977)
Journal of the Royal Statistical Society. Series B (Methodological)
, vol.39
, Issue.1
, pp. 1-38
-
-
Dempster, A.P.1
Laird, N.M.2
Rubin, D.B.3
-
4
-
-
0032441150
-
Cluster analysis and display of genome-wide expression patterns
-
Eisen, M.B., Spellman, P.T., Brown, P.O., Botstein, D.: Cluster analysis and display of genome-wide expression patterns. Proceedings of the National Academy of Sciences of the United States of America 95(25), 14863-14868 (1998)
-
(1998)
Proceedings of the National Academy of Sciences of the United States of America
, vol.95
, Issue.25
, pp. 14863-14868
-
-
Eisen, M.B.1
Spellman, P.T.2
Brown, P.O.3
Botstein, D.4
-
5
-
-
33846400424
-
Large-Scale Mapping and Validation of Escherichia coli Transcriptional Regulation from a Compendium of Expression Profiles
-
Faith, J.J., Hayete, B., Thaden, J.T., Mogno, I., Wierzbowski, J., Cottarel, G., Kasif, S., Collins, J.J., Gardner, T.S.: Large-Scale Mapping and Validation of Escherichia coli Transcriptional Regulation from a Compendium of Expression Profiles. PLoS Biology 5(1), 54-66 (2007)
-
(2007)
PLoS Biology
, vol.5
, Issue.1
, pp. 54-66
-
-
Faith, J.J.1
Hayete, B.2
Thaden, J.T.3
Mogno, I.4
Wierzbowski, J.5
Cottarel, G.6
Kasif, S.7
Collins, J.J.8
Gardner, T.S.9
-
6
-
-
0842288337
-
Inferring Cellular Networks Using Probabilistic Graphical Models
-
Friedman, N.: Inferring Cellular Networks Using Probabilistic Graphical Models. Science 303(5659), 799-805 (2004)
-
(2004)
Science
, vol.303
, Issue.5659
, pp. 799-805
-
-
Friedman, N.1
-
7
-
-
0033637153
-
Genomic Expression Programs in the Response of Yeast Cells to Environmental Changes
-
Gasch, A.P., Spellman, P.T., Kao, C.M., Carmel-Harel, O., Eisen, M.B., Storz, G., Botstein, D., Brown, P.O.: Genomic Expression Programs in the Response of Yeast Cells to Environmental Changes. Mol. Biol. Cell 11(12), 4241-4257 (2000)
-
(2000)
Mol. Biol. Cell
, vol.11
, Issue.12
, pp. 4241-4257
-
-
Gasch, A.P.1
Spellman, P.T.2
Kao, C.M.3
Carmel-Harel, O.4
Eisen, M.B.5
Storz, G.6
Botstein, D.7
Brown, P.O.8
-
8
-
-
60149110901
-
Module networks revisited: Computational assessment and prioritization of model predictions
-
Joshi, A., De Smet, R., Marchal, K., Van de Peer, Y., Michoel, T.: Module networks revisited: computational assessment and prioritization of model predictions. Bioinformatics 25(4), 490-496 (2009)
-
(2009)
Bioinformatics
, vol.25
, Issue.4
, pp. 490-496
-
-
Joshi, A.1
De Smet, R.2
Marchal, K.3
Van De Peer, Y.4
Michoel, T.5
-
9
-
-
38349122751
-
Analysis of a Gibbs sampler method for model-based clustering of gene expression data
-
Joshi, A., Van de Peer, Y., Michoel, T.: Analysis of a Gibbs sampler method for model-based clustering of gene expression data. Bioinformatics 24(2), 176-183 (2008)
-
(2008)
Bioinformatics
, vol.24
, Issue.2
, pp. 176-183
-
-
Joshi, A.1
Van De Peer, Y.2
Michoel, T.3
-
10
-
-
0004149270
-
-
McGraw-Hill Irwin, New York
-
Kutner, M.H., Neter, J., Nachtsheim, C.J., Li, W.: Applied Linear Statistical Models. McGraw-Hill Irwin, New York (2005)
-
(2005)
Applied Linear Statistical Models
-
-
Kutner, M.H.1
Neter, J.2
Nachtsheim, C.J.3
Li, W.4
-
11
-
-
46349096129
-
Regulatory module network of basic/helix-loop-helix transcription factors in mouse brain
-
Li, J., Liu, Z.J., Pan, Y.C., Liu, Q., Fu, X., Cooper, N.G., Li, Y., Qiu, M., Shi, T.: Regulatory module network of basic/helix-loop-helix transcription factors in mouse brain. Genome Biol. 8(11), R244 (2007)
-
(2007)
Genome Biol.
, vol.8
, Issue.11
-
-
Li, J.1
Liu, Z.J.2
Pan, Y.C.3
Liu, Q.4
Fu, X.5
Cooper, N.G.6
Li, Y.7
Qiu, M.8
Shi, T.9
-
12
-
-
38549135468
-
YEASTRACT-DISCOVERER: New tools to improve the analysis of transcriptional regulatory associations in Saccharomyces cerevisiae
-
Monteiro, P.T., Mendes, N.D., Teixeira, M.C., d'Orey, S., Tenreiro, S., Mira, N.P., Pais, H., Francisco, A.P., Carvalho, A.M., Lourenco, A.B., Sa-Correia, I., Oliveira, A.L., Freitas, A.T.: YEASTRACT-DISCOVERER: new tools to improve the analysis of transcriptional regulatory associations in Saccharomyces cerevisiae. Nucl. Acids Res. 36(suppl. 1), D132-D136 (2008)
-
(2008)
Nucl. Acids Res.
, vol.36
, Issue.SUPPL. 1
-
-
Monteiro, P.T.1
Mendes, N.D.2
Teixeira, M.C.3
D'Orey, S.4
Tenreiro, S.5
Mira, N.P.6
Pais, H.7
Francisco, A.P.8
Carvalho, A.M.9
Lourenco, A.B.10
Sa-Correia, I.11
Oliveira, A.L.12
Freitas, A.T.13
-
13
-
-
77955593676
-
A regression tree-based gibbs sampler to learn the regulation programs in a transcription regulatory module network
-
Qi, J., Michoel, T., Butler, G.: A regression tree-based gibbs sampler to learn the regulation programs in a transcription regulatory module network. In: Proceedings of 2010 IEEE Symposium on Computational Intelligence in Bioinformatics and Computational Biology, pp. 1-8 (2010)
-
(2010)
Proceedings of 2010 IEEE Symposium on Computational Intelligence in Bioinformatics and Computational Biology
, pp. 1-8
-
-
Qi, J.1
Michoel, T.2
Butler, G.3
-
14
-
-
21844455527
-
Learning module networks
-
Segal, E., Pe'er, D., Regev, A., Koller, D., Friedman, N.: Learning module networks. Journal of Machine Learning Research 6, 557-588 (2005)
-
(2005)
Journal of Machine Learning Research
, vol.6
, pp. 557-588
-
-
Segal, E.1
Pe'Er, D.2
Regev, A.3
Koller, D.4
Friedman, N.5
-
15
-
-
0037941585
-
Module networks: Identifying regulatory modules and their condition-specific regulators from gene expression data
-
Segal, E., Shapira, M., Regev, A., Pe'er, D., Botstein, D., Koller, D., Friedman, N.: Module networks: identifying regulatory modules and their condition-specific regulators from gene expression data. Nature Genetics 34(2), 166-176 (2003)
-
(2003)
Nature Genetics
, vol.34
, Issue.2
, pp. 166-176
-
-
Segal, E.1
Shapira, M.2
Regev, A.3
Pe'Er, D.4
Botstein, D.5
Koller, D.6
Friedman, N.7
-
16
-
-
4544341015
-
Linear models and empirical bayes methods for assessing differential expression in microarray experiments
-
Smyth, G.K.: Linear models and empirical bayes methods for assessing differential expression in microarray experiments. Stat. Appl. Genet. Mol. Biol. 3 (2004)
-
(2004)
Stat. Appl. Genet. Mol. Biol.
, vol.3
-
-
Smyth, G.K.1
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