-
1
-
-
0003116583
-
Fish pathogens
-
In: Austin B, Altwegg M, Gosling PJ, Joseph SW, editors, New York, John Wiley and Sons
-
Austin B, Adams C, (1996) Fish pathogens. In: Austin B, Altwegg M, Gosling PJ, Joseph SW, editors. The Genus Aeromonas New York John Wiley and Sons pp. 197-229.
-
(1996)
The Genus Aeromonas
, pp. 197-229
-
-
Austin, B.1
Adams, C.2
-
2
-
-
43949176579
-
Pathogenesis of gram-negative bacterial infections in warmwater fish
-
Thune RL, Stanley LA, Cooper K, (1993) Pathogenesis of gram-negative bacterial infections in warmwater fish. Annu Rev Fish Dis 3: 37-68.
-
(1993)
Annu Rev Fish Dis
, vol.3
, pp. 37-68
-
-
Thune, R.L.1
Stanley, L.A.2
Cooper, K.3
-
3
-
-
0011880414
-
Aeromonas and Plesiomonas
-
In: Sussman M, editors, San Diego, Academic Press
-
Janda JM, (2001) Aeromonas and Plesiomonas. In: Sussman M, editors. Molecular Medical Microbiology San Diego Academic Press pp. 1237-1270.
-
(2001)
Molecular Medical Microbiology
, pp. 1237-1270
-
-
Janda, J.M.1
-
4
-
-
0030964241
-
Exploitation of mammalian host cell functions by bacterial pathogens
-
Finlay BB, Cossart P, (1997) Exploitation of mammalian host cell functions by bacterial pathogens. Science 276: 718-725.
-
(1997)
Science
, vol.276
, pp. 718-725
-
-
Finlay, B.B.1
Cossart, P.2
-
5
-
-
0033764483
-
Assembly and function of type III secretory systems
-
Cornelis GR, Van Gijsegem F, (2000) Assembly and function of type III secretory systems. Annu Rev Microbiol 54: 735-774.
-
(2000)
Annu Rev Microbiol
, vol.54
, pp. 735-774
-
-
Cornelis, G.R.1
van Gijsegem, F.2
-
6
-
-
33645976151
-
New structural insights into the bacterial type III secretion system
-
Yip CK, Strynadka NCJ, (2006) New structural insights into the bacterial type III secretion system. Trends Biochem Sci 31: 223-230.
-
(2006)
Trends Biochem Sci
, vol.31
, pp. 223-230
-
-
Yip, C.K.1
Strynadka, N.C.J.2
-
8
-
-
1342323847
-
A type III secretion system is required for Aeromonas hydrophila AH-1 pathogenesis
-
Yu HB, Srinivasa Rao PS, Lee HC, Vilches S, Merino S, et al. (2004) A type III secretion system is required for Aeromonas hydrophila AH-1 pathogenesis. Infect Immun 72: 1248-1256.
-
(2004)
Infect Immun
, vol.72
, pp. 1248-1256
-
-
Yu, H.B.1
Srinivasa Rao, P.S.2
Lee, H.C.3
Vilches, S.4
Merino, S.5
-
9
-
-
33847239885
-
Characterization of extracellular proteins produced by Aeromonas hydrophila AH-1
-
Yu HB, Kaur R, Lim S, Wang XH, Leung KY, (2007) Characterization of extracellular proteins produced by Aeromonas hydrophila AH-1. Proteomics 7: 436-449.
-
(2007)
Proteomics
, vol.7
, pp. 436-449
-
-
Yu, H.B.1
Kaur, R.2
Lim, S.3
Wang, X.H.4
Leung, K.Y.5
-
10
-
-
36849042170
-
Aeromonas hydrophila AH-3 AexT is an ADP-ribosylating toxin secreted through the type III secretion system
-
In press
-
Vilches S, Wilhelms M, Yu HB, Leung KY, Tomás JM, et al. (2007) Aeromonas hydrophila AH-3 AexT is an ADP-ribosylating toxin secreted through the type III secretion system. Microb Pathogenesis In press.
-
(2007)
Microb Pathogenesis
-
-
Vilches, S.1
Wilhelms, M.2
Yu, H.B.3
Leung, K.Y.4
Tomás, J.M.5
-
11
-
-
34547602271
-
Further characterization of a type III secretion system (T3SS) and of a new effector protein from a clinical isolate of Aeromonas hydrophila - Part I
-
Sha J, Wang SF, Suarez G, Sierra JC, Fadl AA, et al. (2007) Further characterization of a type III secretion system (T3SS) and of a new effector protein from a clinical isolate of Aeromonas hydrophila- Part I. Microb Pathog 43: 127-146.
-
(2007)
Microb Pathog
, vol.43
, pp. 127-146
-
-
Sha, J.1
Wang, S.F.2
Suarez, G.3
Sierra, J.C.4
Fadl, A.A.5
-
12
-
-
34547600796
-
Biological characterization of a new type III secretion system effector from a clinical isolate of Aeromonas hydrophila - Part II
-
In press
-
Sierra JC, Suarez G, Sha J, Foltz SM, Popov VL, et al. (2007) Biological characterization of a new type III secretion system effector from a clinical isolate of Aeromonas hydrophila- Part II. Microb Pathogenesis In press.
-
(2007)
Microb Pathogenesis
-
-
Sierra, J.C.1
Suarez, G.2
Sha, J.3
Foltz, S.M.4
Popov, V.L.5
-
13
-
-
0036283512
-
Three-dimensional secretion signals in chaperone-effector complexes of bacterial pathogens
-
Birtalan SC, Phillips RM, Ghosh P, (2002) Three-dimensional secretion signals in chaperone-effector complexes of bacterial pathogens. Mol Cell 9: 971-980.
-
(2002)
Mol Cell
, vol.9
, pp. 971-980
-
-
Birtalan, S.C.1
Phillips, R.M.2
Ghosh, P.3
-
14
-
-
27744509836
-
The PscE-PscF-PscG complex controls type III secretion needle biogenesis in Pseudomonas aeruginosa
-
Quinaud M, Chabert J, Faudry E, Neumann E, Lemaire D, et al. (2005) The PscE-PscF-PscG complex controls type III secretion needle biogenesis in Pseudomonas aeruginosa. J Biol Chem 280: 36293-36300.
-
(2005)
J Biol Chem
, vol.280
, pp. 36293-36300
-
-
Quinaud, M.1
Chabert, J.2
Faudry, E.3
Neumann, E.4
Lemaire, D.5
-
15
-
-
33645093201
-
Tetratricopeptide repeats in the type III secretion chaperone, LcrH: their role in substrate binding and secretion
-
Edqvist PJ, Bröms JE, Betts HJ, Forsberg Å, Pallen MJ, et al. (2006) Tetratricopeptide repeats in the type III secretion chaperone, LcrH: their role in substrate binding and secretion. Mol Microbiol 59: 31-44.
-
(2006)
Mol Microbiol
, vol.59
, pp. 31-44
-
-
Edqvist, P.J.1
Bröms, J.E.2
Betts, H.J.3
Forsberg, Å.4
Pallen, M.J.5
-
16
-
-
37349055354
-
Structure of the Yersinia enterocolitica type III secretion translocator chaperone SycD
-
Büttner CR, Sorg I, Cornelis GR, Heinz DW, Niemann HH, (2008) Structure of the Yersinia enterocolitica type III secretion translocator chaperone SycD. J Mol Biol 375: 997-1012.
-
(2008)
J Mol Biol
, vol.375
, pp. 997-1012
-
-
Büttner, C.R.1
Sorg, I.2
Cornelis, G.R.3
Heinz, D.W.4
Niemann, H.H.5
-
17
-
-
77954407664
-
Structural basis of chaperone recognition of type III secretion system minor translocator proteins
-
Job V, Matteï P-J, Lemaire D, Attree I, Dessen A, (2010) Structural basis of chaperone recognition of type III secretion system minor translocator proteins. J Biol Chem 285: 23224-23232.
-
(2010)
J Biol Chem
, vol.285
, pp. 23224-23232
-
-
Job, V.1
Matteï, P.-J.2
Lemaire, D.3
Attree, I.4
Dessen, A.5
-
18
-
-
52949139839
-
Structure of AscE and induced burial regions in AscE and AscG upon formation of the chaperone needle-subunit complex of type III secretion system in Aeromonas hydrophila
-
Tan YW, Yu HB, Leung KY, Sivaraman J, Mok Y-K, (2008) Structure of AscE and induced burial regions in AscE and AscG upon formation of the chaperone needle-subunit complex of type III secretion system in Aeromonas hydrophila. Protein Sci 17: 1748-1760.
-
(2008)
Protein Sci
, vol.17
, pp. 1748-1760
-
-
Tan, Y.W.1
Yu, H.B.2
Leung, K.Y.3
Sivaraman, J.4
Mok, Y.-K.5
-
19
-
-
25844498470
-
Crystal structure of the Yersinia type III secretion protein YscE
-
Phan J, Austin BP, Waugh DS, (2005) Crystal structure of the Yersinia type III secretion protein YscE. Protein Sci 14: 2759-2763.
-
(2005)
Protein Sci
, vol.14
, pp. 2759-2763
-
-
Phan, J.1
Austin, B.P.2
Waugh, D.S.3
-
20
-
-
40649128950
-
Structural characterization of the Yersinia pestis type III secretion system needle protein YscF in complex with its heterodimeric chaperone YscE/YscG
-
Sun P, Tropea JE, Austin BP, Cherry S, Waugh DS, (2008) Structural characterization of the Yersinia pestis type III secretion system needle protein YscF in complex with its heterodimeric chaperone YscE/YscG. J Mol Biol 377: 819-830.
-
(2008)
J Mol Biol
, vol.377
, pp. 819-830
-
-
Sun, P.1
Tropea, J.E.2
Austin, B.P.3
Cherry, S.4
Waugh, D.S.5
-
21
-
-
34249942920
-
Structure of the heterotrimetric complex that regulates type III secretion needle formation
-
Quinaud M, Plé S, Job V, Contreras-Martel C, Simorre J-P, et al. (2007) Structure of the heterotrimetric complex that regulates type III secretion needle formation. Proc Natl Acad Sci USA 104: 7803-7808.
-
(2007)
Proc Natl Acad Sci USA
, vol.104
, pp. 7803-7808
-
-
Quinaud, M.1
Plé, S.2
Job, V.3
Contreras-Martel, C.4
Simorre, J.-P.5
-
22
-
-
51049124329
-
The type III secretion chaperone SycE promotes a localized disorder-to-order transition in the natively unfolded effector YopE
-
Rodgers L, Gamez A, Riek R, Ghosh P, (2008) The type III secretion chaperone SycE promotes a localized disorder-to-order transition in the natively unfolded effector YopE. J Biol Chem 283: 20857-20863.
-
(2008)
J Biol Chem
, vol.283
, pp. 20857-20863
-
-
Rodgers, L.1
Gamez, A.2
Riek, R.3
Ghosh, P.4
-
23
-
-
67749106086
-
Mapping of the chaperone AcrH binding regions of translocators AopB and AopD and characterization of oligomeric and metastable AcrH-AopB-AopD complexes in the type III secretion system of Aeromonas hydrophila
-
Tan YW, Yu HB, Sivaraman J, Leung KY, Mok Y-K, (2009) Mapping of the chaperone AcrH binding regions of translocators AopB and AopD and characterization of oligomeric and metastable AcrH-AopB-AopD complexes in the type III secretion system of Aeromonas hydrophila. Protein Sci 18: 1724-1734.
-
(2009)
Protein Sci
, vol.18
, pp. 1724-1734
-
-
Tan, Y.W.1
Yu, H.B.2
Sivaraman, J.3
Leung, K.Y.4
Mok, Y.-K.5
-
24
-
-
40749148575
-
On distance and similarity in fold space
-
Sippl MJ, (2008) On distance and similarity in fold space. Bioinformatics 24: 872-873.
-
(2008)
Bioinformatics
, vol.24
, pp. 872-873
-
-
Sippl, M.J.1
-
25
-
-
38849092210
-
A note on difficult structure alignment problems
-
Sippl MJ, Wiederstein M, (2008) A note on difficult structure alignment problems. Bioinformatics 24: 426-427.
-
(2008)
Bioinformatics
, vol.24
, pp. 426-427
-
-
Sippl, M.J.1
Wiederstein, M.2
-
26
-
-
34548232365
-
Inference of macromolecular assemblies from crystalline state
-
Krissinel E, Henrick K, (2007) Inference of macromolecular assemblies from crystalline state. J Mol Biol 372: 774-797.
-
(2007)
J Mol Biol
, vol.372
, pp. 774-797
-
-
Krissinel, E.1
Henrick, K.2
-
27
-
-
0028904072
-
Protein fragments as models for events in protein folding pathways: Protein engineering analysis of the association of two complementary fragments of the barley chymotrypsin inhibitor 2 (CI-2)
-
Ruiz-Sanz J, de Prat Gay G, Otzen DE, Fersht AR, (1995) Protein fragments as models for events in protein folding pathways: Protein engineering analysis of the association of two complementary fragments of the barley chymotrypsin inhibitor 2 (CI-2). Biochemistry 34: 1695-1701.
-
(1995)
Biochemistry
, vol.34
, pp. 1695-1701
-
-
Ruiz-Sanz, J.1
de Prat Gay, G.2
Otzen, D.E.3
Fersht, A.R.4
-
28
-
-
0034753703
-
Structure of the Yersinia type III secretory system chaperone SycE
-
Birtalan S, Ghosh P, (2001) Structure of the Yersinia type III secretory system chaperone SycE. Nat Struct Mol Biol 8: 974-978.
-
(2001)
Nat Struct Mol Biol
, vol.8
, pp. 974-978
-
-
Birtalan, S.1
Ghosh, P.2
-
29
-
-
67649861394
-
IpaB-IpgC interaction defines binding motif for type III secretion translocator
-
Lunelli M, Lokareddy RK, Zychlinsky A, Kolbe M, (2009) IpaB-IpgC interaction defines binding motif for type III secretion translocator. Proc Natl Acad Sci USA 106: 9661-9666.
-
(2009)
Proc Natl Acad Sci USA
, vol.106
, pp. 9661-9666
-
-
Lunelli, M.1
Lokareddy, R.K.2
Zychlinsky, A.3
Kolbe, M.4
-
30
-
-
13844255387
-
Natively unfolded proteins
-
Fink AL, (2005) Natively unfolded proteins. Curr Opin Struct Biol 15: 35-41.
-
(2005)
Curr Opin Struct Biol
, vol.15
, pp. 35-41
-
-
Fink, A.L.1
-
31
-
-
14644435825
-
Intrinsically unstructured proteins and their functions
-
Dyson HJ, Wright PE, (2005) Intrinsically unstructured proteins and their functions. Nat Rev Mol Cell Biol 6: 197-208.
-
(2005)
Nat Rev Mol Cell Biol
, vol.6
, pp. 197-208
-
-
Dyson, H.J.1
Wright, P.E.2
-
32
-
-
3442902456
-
The role of structural disorder in the function of RNA and protein chaperones
-
Tompa P, Csermely P, (2004) The role of structural disorder in the function of RNA and protein chaperones. FASEB J 18: 1169-1175.
-
(2004)
FASEB J
, vol.18
, pp. 1169-1175
-
-
Tompa, P.1
Csermely, P.2
-
33
-
-
0037472730
-
Interaction of the disordered terminal regions of flagellin upon flagellar filament formation
-
Gugolya Z, Muskotal A, Sebestyen A, Dioszeghy Z, Vonderviszt F, (2003) Interaction of the disordered terminal regions of flagellin upon flagellar filament formation. FEBS Lett 535: 66-70.
-
(2003)
FEBS Lett
, vol.535
, pp. 66-70
-
-
Gugolya, Z.1
Muskotal, A.2
Sebestyen, A.3
Dioszeghy, Z.4
Vonderviszt, F.5
-
34
-
-
1642512502
-
The C-terminal domain of measles virus nucleoprotein belongs to the class of intrinsically disordered proteins that fold upon binding to their physiological partner
-
Bourhis JM, Johansson K, Receveur-Brechot V, Oldfield CJ, Dunker KA, et al. (2004) The C-terminal domain of measles virus nucleoprotein belongs to the class of intrinsically disordered proteins that fold upon binding to their physiological partner. Virus Res 99: 157-167.
-
(2004)
Virus Res
, vol.99
, pp. 157-167
-
-
Bourhis, J.M.1
Johansson, K.2
Receveur-Brechot, V.3
Oldfield, C.J.4
Dunker, K.A.5
-
35
-
-
4644366388
-
HKL2MAP: a graphical user interface for phasing with SHELX programs
-
Pape T, Schneider TR, (2004) HKL2MAP: a graphical user interface for phasing with SHELX programs. J Appl Cryst 37: 843-844.
-
(2004)
J Appl Cryst
, vol.37
, pp. 843-844
-
-
Pape, T.1
Schneider, T.R.2
-
36
-
-
0042810719
-
Towards automated protein structure determination: BnP, the SnB-PHASES interface
-
Weeks CM, Blessing RH, Miller R, Mungee R, Potter SA, et al. (2002) Towards automated protein structure determination: BnP, the SnB-PHASES interface. Z Kristallogr 217: 686-693.
-
(2002)
Z Kristallogr
, vol.217
, pp. 686-693
-
-
Weeks, C.M.1
Blessing, R.H.2
Miller, R.3
Mungee, R.4
Potter, S.A.5
-
37
-
-
0028103275
-
The CCP4 suite: programs for protein crystallography
-
Collaborative Computational Project
-
Collaborative Computational Project (1994) The CCP4 suite: programs for protein crystallography. Acta Cryst D Biol Crystallogr D50: 760-763.
-
(1994)
Acta Cryst D Biol Crystallogr
, vol.D50
, pp. 760-763
-
-
-
38
-
-
50249136103
-
Automated macromolecular model building for X-ray crystallography using ARP/wARP version 7
-
Langer G, Cohen SX, Lamzin VS, Perrakis A, (2008) Automated macromolecular model building for X-ray crystallography using ARP/wARP version 7. Nature Protocols 3: 1171-1179.
-
(2008)
Nature Protocols
, vol.3
, pp. 1171-1179
-
-
Langer, G.1
Cohen, S.X.2
Lamzin, V.S.3
Perrakis, A.4
-
39
-
-
13244281317
-
Coot: model-building tools for molecular graphics
-
Emsley P, Cowtan K, (2004) Coot: model-building tools for molecular graphics. Acta Cryst D Biol Crystallogr 60: 2126-2132.
-
(2004)
Acta Cryst D Biol Crystallogr
, vol.60
, pp. 2126-2132
-
-
Emsley, P.1
Cowtan, K.2
-
40
-
-
84889120137
-
Improved methods for the building of protein models in electron density maps and the location of errors in these models
-
Jones TA, Zou J-Y, Cowan SW, Kjeldgaard M, (1991) Improved methods for the building of protein models in electron density maps and the location of errors in these models. Acta Cryst A47: 110-119.
-
(1991)
Acta Cryst
, vol.A47
, pp. 110-119
-
-
Jones, T.A.1
Zou, J.-Y.2
Cowan, S.W.3
Kjeldgaard, M.4
-
41
-
-
3543012707
-
Crystallography & NMR system: A new software suite for macromolecular structure determination
-
Brünger AT, Adams PD, Clore GM, DeLano WL, Gros P, et al. (1998) Crystallography & NMR system: A new software suite for macromolecular structure determination. Acta Cryst D Biol Crystallogr 54: 905-921.
-
(1998)
Acta Cryst D Biol Crystallogr
, vol.54
, pp. 905-921
-
-
Brünger, A.T.1
Adams, P.D.2
Clore, G.M.3
DeLano, W.L.4
Gros, P.5
-
42
-
-
0000243829
-
PROCHECK: a program to check the stereochemical quality of protein structures
-
Laskowski RA, MacArthur MW, Moss DS, Thornton JM, (1993) PROCHECK: a program to check the stereochemical quality of protein structures. J Appl Cryst 26: 283-291.
-
(1993)
J Appl Cryst
, vol.26
, pp. 283-291
-
-
Laskowski, R.A.1
MacArthur, M.W.2
Moss, D.S.3
Thornton, J.M.4
-
43
-
-
0027968068
-
CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, positions-specific gap penalties and weight matrix choice
-
Thompson JD, Higgins DG, Gibson TJ, (1994) CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, positions-specific gap penalties and weight matrix choice. Nucleic Acids Res 22: 4673-4680.
-
(1994)
Nucleic Acids Res
, vol.22
, pp. 4673-4680
-
-
Thompson, J.D.1
Higgins, D.G.2
Gibson, T.J.3
-
44
-
-
4444221565
-
UCSF Chimera - A visualization system for exploratory research and analysis
-
Pettersen EF, Goddard TD, Huang CC, Couch GS, FGreenblatt DM, et al. (2004) UCSF Chimera- A visualization system for exploratory research and analysis. J Comput Chem 25: 1605-1612.
-
(2004)
J Comput Chem
, vol.25
, pp. 1605-1612
-
-
Pettersen, E.F.1
Goddard, T.D.2
Huang, C.C.3
Couch, G.S.4
FGreenblatt, D.M.5
-
45
-
-
0003845223
-
The PyMOL molecular graphics system
-
DeLano Scientific, Palo Alto, CA, USA
-
DeLano WL, (2002) The PyMOL molecular graphics system. DeLano Scientific, Palo Alto, CA, USAhttp://www.pymol.org.
-
(2002)
-
-
DeLano, W.L.1
|