Differential pathogenicity of two different recombinant PVYNTN isolates in Physalis floridana is likely determined by the coat protein gene

Virology Journal

Volumn 8, Issue , 2011, Pages

  Hu, Xinxi ^a   Nie, Xianzhou ^b   He, Changzheng ^a   Xiong, Xingyao ^a  

^a HUNAN AGRICULTURAL UNIVERSITY   (China)

^b FREDERICTON RESEARCH AND DEVELOPMENT CENTRE   (Canada)

Author keywords

[No Author keywords available]

Indexed keywords

COAT PROTEIN; NUCLEOTIDE; CAPSID PROTEIN; COAT PROTEIN, POTATO VIRUS Y; VIRULENCE FACTOR; VIRUS DNA;

5' UNTRANSLATED REGION; ARTICLE; GENE LOCATION; GENE SEQUENCE; GENETIC ANALYSIS; GENETIC VARIABILITY; NECROSIS; NONHUMAN; PATHOGENICITY; PHYSALIS FLORIDANA; PLANT; PLANT DISEASE; PLANT LEAF; PLANT STEM; POTYVIRUS; RECOMBINANT GENE; REVERSE TRANSCRIPTION POLYMERASE CHAIN REACTION; VIRUS INFECTION; VIRUS ISOLATION; VIRUS STRAIN; CHEMISTRY; CHINA; DNA SEQUENCE; GENETIC RECOMBINATION; GENETICS; METABOLISM; PHYSALIS; VIROLOGY;

PHYSALIS PUBESCENS; POTATO VIRUS Y; POTATO VIRUS Y STRAIN NTN;

CAPSID PROTEINS; CHINA; DNA, VIRAL; PHYSALIS; PLANT DISEASES; POTYVIRUS; RECOMBINATION, GENETIC; SEQUENCE ANALYSIS, DNA; VIRULENCE FACTORS;

EID: 79955647238     PISSN: None     EISSN: 1743422X     Source Type: Journal    
DOI: 10.1186/1743-422X-8-207     Document Type: Article

References (24)

1. DD Shukla CW Ward AA Brunt, The Potyviridae Wallingford, Oxon, UK: CAB International 1994
2. Highlights and prospects of potyvirus molecular biology. JL Riechmann S Laín JA García, J Gen Virol 1992 73 1 16 10.1099/0022-1317-73-1-1 1730931
3. N) found recently in Poland. M Chrzanowska, Potato Res 1991 34 178 182
4. N isolates. L Glais M Tribodet C Kerlan, Arch Virol 2002 147 363 378 10.1007/s705-002-8325-0 11890528 (Pubitemid 34159555)
5. Molecular and pathological characterization of N:O isolates of the Potato virus Y from Manitoba, Canada. X Nie RP Singh M Singh, Can J Plant Pathol 2004 26 573 583 10.1080/07060660409507178
6. Biological characterization of various geographical isolates of potato virus Y inducing superficial necrosis on potato tubers. M Le Romancer C Kerlan M Nedellec, Plant Pathol 1994 43 138 144 10.1111/j.1365-3059.1994.tb00563.x (Pubitemid 2054262)
7. N by mutation rather than recombination. X Nie RP Singh, Virus Genes 2003 26 39 47 10.1023/A:1022326021195 12680692 (Pubitemid 36363309)
8. Possible escape of a recombinant isolate of Potato virus Y by serological indexing and methods of its detection. RP Singh DL McLaren X Nie M Singh, Plant Dis 2003 87 679 685 10.1094/PDIS.2003.87.6.679 (Pubitemid 36619145)
9. Molecular characterization and detection of recombinant isolates of Potato virus Y from China. X Hu C He Y Xiao X Xiong X Nie, Arch Virol 2009 154 1303 1312 10.1007/s00705-009-0448-z 19597695
10. Cloning and sequencing of potato virus Y (Hungarian isolate) genomic RNA. V Thole T Dalmay J Burgyan E Balazs, Gene 1993 123 149 156 10.1016/0378- 1119(93)90118-M 8428653 (Pubitemid 23064627)
11. NTN. X Nie RP Singh, J Virol Methods 2002 103 145 156 10.1016/S0166-0934(02)00023-X 12008009 (Pubitemid 34468053)
12. A new approach for the simultaneous differentiation of biological and geographical strains of Potato virus Y by uniplex and multiplex RT-PCR. X Nie RP Singh, J Virol Methods 2002 104 41 54 10.1016/S0166-0934(02)00037-X 12020791 (Pubitemid 34521799)
13. NTN strains by multiplex RT-PCR. X Nie RP Singh, J Virol Methods 2003 113 69 77 10.1016/S0166-0934(03)00221-0 14553892 (Pubitemid 37205122)
14. Diversity among Potato virus Y isolates obtained from potatoes grown in the United States. LM Piche RP Singh X Nie NC Gudmestad, Phytopathology 2004 94 1368 1375 10.1094/PHYTO.2004.94.12.1368 18943708 (Pubitemid 39569384)
15. NTN. M Chikh Ali T Maoka KT Natsuaki, J Phytopath 2007 155 409 415 2007 10.1111/j.1439-0434. 2007.01251.x (Pubitemid 47083302)
16. NTN-NW, a novel recombinant strain of Potato virus Y predominating in potato fields in Syria. M Chikh Ali T Maokac T Natsuakib KT Natsuaki, Plant Pathol 2010 59 31 41 10.1111/j.1365-3059.2009.02174.x
17. The role of the coat protein region in symptom formation on Physalis floridana varies between PVY strains. A Bukovinszki R Gotz E Johansen E Maiss E Balazs, Virus Res 2007 127 122 125 10.1016/j.virusres.2007.03.023 17482305 (Pubitemid 46795516)
18. O variants of Potato virus Y in potatoes in New Brunswick, Canada. B Nie M Singh A Sullivan RP Singh C Xie X Nie, Plant Dis 2011 95 113 119 10.1094/PDIS-04-10-0257
19. ClustalW and ClustalX version 2. MA Larkin G Blackshields NP Brown R Chenna PA McGettigan H McWilliam F Valentin IM Wallace A Wilm R Lopez JD Thompson TJ Gibson DG Higgins, Bioinformatics 2007 23 2947 2948 10.1093/bioinformatics/btm404 17846036
20. Full-length human immunodeficiency virus type 1 genomes from subtype C-infected seroconverters in India, with evidence of intersubtype recombination. KS Lole RC Bollinger RS Paranjape D Gadkari SS Kulkarni NG Novak R Ingersoll HW Sheppard SC Ray, J Virol 1999 73 152 160 9847317 (Pubitemid 28565356)
21. N isolates in infected Nicotiana tabacum cv. Xanthi. M Tribodet L Glais C Kerlan E Jacquot, J Gen Virol 2005 86 2101 2105 10.1099/vir.0.80926-0 15958688 (Pubitemid 40916392)
22. A novel recombinant strain of Potato virus Y suggests a new viral genetic determinant of vein necrosis in tobacco. X Hu T Meacham L Ewing SM Gray AV Karasev, Virus Res 2009 143 68 76 10.1016/j.virusres.2009.03.008 19463723
23. Infectious in vivo and in vitro transcripts from a full-length cDNA clone of PVY-N605, a Swiss necrotic isolate of potato virus Y. G Jakab E Droz G Brigneti D Baulcombe P Malnoe, J Gen Virol 1997 78 3141 3145 9400962 (Pubitemid 27511302)
24. Presence of necrotic strains of Potato virus Y in Mexican potatoes. V Ramírez-Rodríguez K Avĩa-Padilla G Frías-Trevĩo L Silva-Rosales J Martínez-Soriano, Virology J 2009 6 48 10.1186/1743-422X-6-48