DNA-encoding to improve performance and allow parallel evaluation of the binding characteristics of multiple antibodies in a surface-bound immunoassay format

Analytical Chemistry

Volumn 83, Issue 9, 2011, Pages 3572-3580

  Washburn, Adam L ^a   Gomez, Joseph ^a   Bailey, Ryan C ^a  

^a UNIVERSITY OF ILLINOIS AT URBANA CHAMPAIGN   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

ANTIGEN BINDING CAPACITY; BINDING CHARACTERISTICS; CHAOTROPIC AGENTS; DNA DUPLEXES; EQUILIBRIUM BINDING; ESSENTIAL COMPONENT; HIGH AFFINITY; MICRORINGS; PARALLEL ANALYSIS; PARALLEL EVALUATION; PROTEIN TARGETS;

ANTIBODIES; ANTIGENS; BINDING ENERGY; DNA; ENCODING (SYMBOLS); MULTIPLEXING; NUCLEIC ACIDS; SENSOR ARRAYS;

DNA SEQUENCES;

ALPHA FETOPROTEIN; ANTIBODY; COMPLEMENTARY DNA; DNA; IMMOBILIZED ANTIBODY; PROSTATE SPECIFIC ANTIGEN;

ANIMAL; ANTIBODY AFFINITY; ARTICLE; CHEMICAL STRUCTURE; CHEMISTRY; CONFORMATION; GENETICS; HUMAN; IMMUNOASSAY; IMMUNOLOGY; INSTRUMENTATION; KINETICS; METHODOLOGY; MICROARRAY ANALYSIS;

ALPHA-FETOPROTEINS; ANIMALS; ANTIBODIES; ANTIBODIES, IMMOBILIZED; ANTIBODY AFFINITY; DNA; DNA, COMPLEMENTARY; HUMANS; IMMUNOASSAY; KINETICS; MICROARRAY ANALYSIS; MODELS, MOLECULAR; NUCLEIC ACID CONFORMATION; PROSTATE-SPECIFIC ANTIGEN;

EID: 79955556434     PISSN: 00032700     EISSN: None     Source Type: Journal    
DOI: 10.1021/ac200317z     Document Type: Article

References (37)

1. Krishnamoorthy, G.; Beusink, J. B.; Schasfoort, R. B. M. Anal. Methods 2010, 2, 1020-1025
2. Krishnamoorthy, G.; Carlen, E. T.; Bomer, J. G.; Wijnperle, D.; deBoer, H. L.; Berg, A. v. d.; Schasfoort, R. B. M. Lab Chip 2010, 10, 986-990
3. Bravman, T.; Bronner, V.; Lavie, K.; Notcovich, A.; Papalia, G. A.; Myszka, D. G. Anal. Biochem. 2006, 358, 281-288
4. Nahshol, O.; Bronner, V.; Notcovich, A.; Rubrecht, L.; Laune, D.; Bravman, T. Anal. Biochem. 2008, 383, 52-60
5. Hosse, R. J.; Tay, L.; Hattarki, M. K.; Pontes-Braz, L.; Pearce, L. A.; Nuttall, S. D.; Dolezal, O. Anal. Biochem. 2009, 385, 346-357
6. Özkumur, E.; Needham, J. W.; Bergstein, D. A.; Gonzalez, R.; Cabodi, M.; Gershoni, J. M.; Goldberg, B. B.; Ünlü, M. S. Proc. Natl. Acad. Sci. U.S.A. 2008, 105, 7988-7992
7. Olkhov, R. V.; Shaw, A. M. Anal. Biochem. 2010, 396, 30-35
8. Byeon, J.-Y.; Bailey, R. C. Analyst 2011, DOI: 10.1039/c1030an00853b.
9. Washburn, A. L.; Gunn, L. C.; Bailey, R. C. Anal. Chem. 2009, 81, 9499-9506
10. Washburn, A. L.; Luchansky, M. S.; Bowman, A. L.; Bailey, R. C. Anal. Chem. 2010, 82, 69-72
11. Luchansky, M. S.; Bailey, R. C. Anal. Chem. 2010, 82, 1975-1981
12. Boozer, C.; Ladd, J.; Chen, S.; Yu, Q.; Homola, J.; Jiang, S. Anal. Chem. 2004, 76, 6967-6972
13. Boozer, C.; Ladd, J.; Chen, S.; Jiang, S. Anal. Chem. 2006, 78, 1515-1519
14. Ladd, J.; Boozer, C.; Yu, Q.; Chen, S.; Homola, J.; Jiang, S. Langmuir 2004, 20, 8090-8095
15. Bailey, R. C.; Kwong, G. A.; Radu, C. G.; Witte, O. N.; Heath, J. R. J. Am. Chem. Soc. 2007, 129, 1959-1967
16. Fan, R.; Vermesh, O.; Srivastava, A.; Yen, B. K. H.; Qin, L.; Ahmad, H.; Kwong, G. A.; Liu, C.-C.; Gould, J.; Hood, L.; Heath, J. R. Nat. Biotechnol. 2008, 26, 1373-1378
17. Schroeder, H.; Adler, M.; Gerigk, K.; Müller-Chorus, B.; Götz, F.; Niemeyer, C. M. Anal. Chem. 2009, 81, 1275-1279
18. Wacker, R.; Schröder, H.; Niemeyer, C. M. Anal. Biochem. 2004, 330, 281-287
19. Niemeyer, C. M.; Sano, T.; Smith, C. L.; Cantor, C. R. Nucleic Acids Res. 1994, 22, 5530-5539
20. Wacker, R.; Niemeyer, C. M. ChemBioChem 2004, 5, 453-459
21. Bano, F.; Fruk, L.; Sanavio, B.; Glettenberg, M.; Casalis, L.; Niemeyer, C. M.; Scoles, G. Nano Lett. 2009, 9, 2614-2618
22. Fruk, L.; Kuhlmann, J.; Niemeyer, C. M. Chem. Commun. 2009, 230-232
23. Niemeyer, C. M.; Boldt, L.; Ceyhan, B.; Blohm, D. Anal. Biochem. 1999, 268, 54-63
24. Maruyama, T.; Katoh, S.; Nakajima, M.; Nabetani, H.; Abbott, T. P.; Shono, A.; Satoh, K. J. Membr. Sci. 2001, 192, 201-207
25. Vermeer, A. W. P.; Giacomelli, C. E.; Norde, W. Biochim. Biophys. Acta, Gen. Subj. 2001, 1526, 61-69
26. Sen, P.; Yamaguchi, S.; Tahara, T. J. Phys. Chem. B 2008, 112, 13473-13475
27. MacBeath, G.; Schreiber, S. L. Science (Wash.) 2000, 289, 1760-1763
28. Andersson, K.; Hamalainen, M.; Malmqvist, M. Anal. Chem. 1999, 71, 2475-2481
29. Karlsson, R.; Katsamba, P. S.; Nordin, H.; Pol, E.; Myszka, D. G. Anal. Biochem. 2006, 349, 136-147
30. Iqbal, M.; Gleeson, M. A.; Spaugh, B.; Tybor, F.; Gunn, W. G.; Hochberg, M.; Baehr-Jones, T.; Bailey, R. C.; Gunn, L. C. IEEE J. Sel. Top. Quantum Electron. 2010, 16, 654-661
31. Caution! Piranha solutions are extraordinarily dangerous, reacting explosively with trace quantities of organics.
32. Solulink Protein-Oligo Conjugation Kit. http://store.solulink.com/ products/protein-oligo-conjugation-kit (accessed March 31, 2011).
33. Byeon, J.-Y.; Limpoco, F. T.; Bailey, R. C. Langmuir 2010, 26, 15430-15435
34. Myszka, D. G. J. Mol. Recognit. 1999, 12, 279-284
35. Karlsson, R.; Michaelsson, A.; Mattsson, L. J. Immunol. Methods 1991, 145, 229-240
36. Luchansky, M. S.; Washburn, A. L.; Martin, T. A.; Iqbal, M.; Gunn, L. C.; Bailey, R. C. Biosens. Bioelectron. 2010, 26, 1283-1291
37. Nice, E.; Layton, J.; Fabri, L.; Hellman, U.; Engstrom, A.; Persson, B.; Burgess, A. W. J. Chromatogr. 1993, 646, 159-168