Development of Expressed Sequence Tags from the Pearl Oyster, Pinctada martensii Dunker

Marine Biotechnology

Volumn 13, Issue 2, 2011, Pages 275-283

  Wang, Aimin ^a,b   Wang, Yan ^b   Gu, Zhifeng ^b   Li, Sifa ^a   Shi, Yaohua ^b   Guo, Ximing ^c  

^a SHANGHAI OCEAN UNIVERSITY   (China)

^b HAINAN UNIVERSITY   (China)

^c RUTGERS UNIVERSITY   (United States)

Author keywords

Aquaculture; Expressed sequence tags (ESTs); Genetic markers; Host defense genes; Pearl oyster; Pinctada martensii

Indexed keywords

EXPRESSED SEQUENCE TAGS; GENETIC MARKERS; HOST DEFENSE GENES; PEARL OYSTER; PINCTADA MARTENSII;

AQUACULTURE; BIOCHEMISTRY; GEMS; ONCOGENIC VIRUSES; PROTEINS; SHELLFISH; TISSUE;

GENES;

AQUACULTURE PRODUCTION; BIVALVE; ENZYME ACTIVITY; GENETIC MARKER; INHIBITOR; METABOLISM; MITOCHONDRIAL DNA; MOLECULAR ANALYSIS; PROTEIN;

ANIMAL; AQUACULTURE; ARTICLE; DNA SEQUENCE; EXPRESSED SEQUENCE TAG; GENE EXPRESSION PROFILING; GENE LIBRARY; GENETIC MARKER; GENETICS; IMMUNOLOGY; INNATE IMMUNITY; METABOLISM; PINCTADA;

ANIMALS; AQUACULTURE; EXPRESSED SEQUENCE TAGS; GENE EXPRESSION PROFILING; GENE LIBRARY; GENETIC MARKERS; IMMUNITY, INNATE; PINCTADA; SEQUENCE ANALYSIS, DNA;

CHINA; JAPAN;

PINCTADA; PINCTADA MARTENSI;

EID: 79955527163     PISSN: 14362228     EISSN: None     Source Type: Journal    
DOI: 10.1007/s10126-010-9296-9     Document Type: Article

References (29)

1. Arason GJ (1996) Lectins as defense molecules in vertebrates and invertebrates. Fish Shellfish Immunol 6: 277-289.
2. Ashburner M, Ball CA, Blake JA, Botstein D, Butler H, Cherry JM, Davis AP, Dolinski K, Dwight SS, Eppig JT, Harris MA, Hill DP, Issel-Tarver L, Kasarskis A, Lewis S, Matese JC, Richardson JE, Ringwald M, Rubin GM, Sherlock G (2000) Gene ontology: tool for the unification of biology. The Gene Ontology Consortium. Nat Genet 25(1): 25-29.
3. Deugnier Y, Turlin B, Loreal O (1998) Iron and neoplasia. J Hepatol 28(Suppl 1): 21-25.
4. Doumas S, Kolokotronis A, Stefanopoulos P (2005) Anti-inflammatory and antimicrobial roles of secretory leukocyte protease inhibitor. Infect Immun 73: 1271-1274.
5. Ewart K, Johnson S (2001) Lectins of the innate immune system and their relevance to fish health. J Mar Sci 58: 380-385.
6. Gauthier JD, Vasta GR (1994) Inhibition of in vitro replication of the oyster parasite Perkinsus marinus by the natural iron chelators transferrin, lactoferrin, and desferrioxamine. Dev Comp Immunol 18(4): 277-286.
7. Greaves DR, Gordon S (2005) Recent insights into the biology of macrophage scavenger receptors. J Lipid Res 46: 11-20.
8. Gueguen Y, Cadoret JP, Flament D, Barreau-Roumiguiere C, Girardot AL, Garnier J, Hoareau A, Bachere E, Escoubas JM (2003) Immune gene discovery by expressed sequence tags generated from hemocytes of the bacteria-challenged oyster, Crassostrea gigas. Gene 303: 139-145.
9. Guo X, Ford SE, Zhang F (1999) Molluscan aquaculture in China. J Shellfish Res 18: 19-31.
10. Hamilton G, Colbert JD, Schuettelkopf AW, Watts C (2008) Cystatin F is a cathepsin C-directed protease inhibitor regulated by proteolysis. EMBO J 27(3): 499-508.
11. Hann HW, Stahlhut MW, Hann CL (1990) Effect of iron and desferoxamine on cell growth and in vitro ferritin synthesis in human hepatoma cell lines. Hepatology 11: 566-569.
12. Hiemstra PS (2000) Novel roles of protease inhibitors in infection and inflammation. Biochem Soc Trans 30: 116-120.
13. Hooper NM (2002) Proteases in biology and medicine. Portland, London.
14. Hu W, Yan Q, Shen DK, Liu F, Zhu ZD, Song HD, Xu XR, Wang ZJ, Rong YP, Zeng LC, Wu J, Zhang X, Wang JJ, Xu XN, Wang SY, Fu G, Zhang XL, Wang ZQ, Brindley PJ, McManus DP, Xue CL, Feng Z, Chen Z, Han ZG (2003) Evolutionary and biomedical implication of a Schistosoma japonicum complementary DNA resource. Nat Genet 35: 139-147.
15. Jenny MJ, Ringwood AH, Lacy ER, Lewitus AJ, Kempton JW, Gross PS, Warr GW, Chapman RW (2002) Potential indicators of stress response identified by expressed sequence tag analysis of hemocytes and embryos from the American oyster, Crassostrea virginica. Mar Biotechnol 4: 81-93.
16. Liu XF, Theil EC (2005) Ferritin as an iron concentrator and chelator target. Ann N Y Acad Sci 1054(1): 136-140.
17. Matsubara K, Okubo K (1993) Identification of new genes by systematic analysis of cDNAs and database expression. Curr Opin Biotechnol 4(6): 672-677.
18. Peatman EJ, Wei X, Feng J, Liu L, Kucuktas H, Li P, He C, Rouse D, Walladce R, Dunham R, Liu Z (2004) Development of expressed sequence tags from eastern oyster (Crassostrea virginica): lessons learned from previous efforts. Mar Biotechnol 6: S491-S496.
19. Quilang J, Wang SL, Li P, Abernathy J, Peatman E, Wang YP, Wang LL, Shi YH, Wallace R, Guo XM, Liu ZJ (2007) Generation and analysis of ESTs from the eastern oyster. Crassostrea virginica Gmelin and identification of microsatellite and SNP markers. BMC Genomics 8: 157.
20. Roberts SB, Goetz FW (2003) Expressed sequence tag analysis of genes expressed in the bay scallop, Argopecten irradians. Biol Bull 205: 227-228.
21. Santoro MG (2000) Heat shock factors and the control of the stress response. Biochem Pharmacol 59(1): 55-63.
22. Shi YH, Wang AM, Wu X (2004) Survey on polychaete infestation of farmed pearl oyster, Pinctada martensii in China. Marine Sciences 28(7): 13-18, In Chinese.
23. Shi YH, Wang Y, Hong K, Hou ZH, Wang AM, Guo XM (2009) Characterization of 31 EST-derived microsatellite markers for the pearl oyster Pinctada martensii (Dunker). Mol Ecol Resour 9(1): 177-179.
24. Song L, Xu W, Li C, Li H, Wu L, Xiang J, Guo X (2006) Development of expressed sequence tags from the bay scallop, Argopecten irradians irradians. Mar Biotechnol 4(6): 161-169.
25. Tanguy A, Guo X, Ford SE (2004) Discovery of genes expressed in response to Perkinsus marinus challenge in eastern (Crassostrea virginica) and Pacific (C. gigas) oysters. Gene 338: 121-131.
26. Vizcaino JA, Gonzalez FJ, Suarez MB, Redondo J, Heinrich J, Delgado-Jarana J, Hermosa R, Gutierrez S, Monte E, Llobell A, Rey M (2006) Generation, annotation and analysis of ESTs from Trichoderma harzianum CECT 2413. BMC Genomics 7: 193.
27. Wang Y, Guo X (2006) Development and characterization of EST-SSR markers in the eastern oyster Crassostrea virginica. J Shellfish Res 25(2): 790.
28. Yang RY, Hsu DK, Liu FT (1996) Expression of galectin-3 modulates T cell growth and apoptosis. Proc Natl Acad Sci USA 193(13): 6737-6742.
29. Zhang L (2002) The development of international pearl industry and the countermeasures taken by China to speed up Chinese pearl industry. Marine Science 26(11): 10-13, In Chinese.