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Volumn 408, Issue 5, 2011, Pages 839-849

TopR2, the second reverse gyrase of sulfolobus solfataricus, exhibits unusual properties

Author keywords

Archaea; DNA supercoiling; reverse gyrase; thermophile; topoisomerase

Indexed keywords

ADENOSINE TRIPHOSPHATE; BACTERIAL ENZYME; DNA; TOPOISOMERASE REVERSE 1 PROTEIN; TOPOISOMERASE REVERSE 2 PROTEIN; UNCLASSIFIED DRUG;

EID: 79955480900     PISSN: 00222836     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.jmb.2011.03.030     Document Type: Article
Times cited : (23)

References (52)
  • 1
    • 0034923502 scopus 로고    scopus 로고
    • DNA topoisomerases: Structure, function, and mechanism
    • DOI 10.1146/annurev.biochem.70.1.369
    • Champoux J.J. DNA topoisomerases: structure, function, and mechanism Annu. Rev. Biochem. 70 2001 369 413 (Pubitemid 32662215)
    • (2001) Annual Review of Biochemistry , vol.70 , pp. 369-413
    • Champoux, J.J.1
  • 2
    • 2442599792 scopus 로고    scopus 로고
    • Structure, molecular mechanisms, and evolutionary relationships in DNA topoisomerases
    • DOI 10.1146/annurev.biophys.33.110502.140357
    • Corbett K.D., and Berger J.M. Structure, molecular mechanisms, and evolutionary relationships in DNA topoisomerases Annu. Rev. Biophys. Biomol. Struct. 33 2004 95 118 (Pubitemid 38829953)
    • (2004) Annual Review of Biophysics and Biomolecular Structure , vol.33 , pp. 95-118
    • Corbett, K.D.1    Berger, J.M.2
  • 3
    • 0036085460 scopus 로고    scopus 로고
    • Cellular roles of DNA topoisomerases: A molecular perspective
    • DOI 10.1038/nrm831
    • Wang J.C. Cellular roles of DNA topoisomerases: a molecular perspective Nat. Rev., Mol. Cell Biol. 3 2002 430 440 (Pubitemid 34685700)
    • (2002) Nature Reviews Molecular Cell Biology , vol.3 , Issue.6 , pp. 430-440
    • Wang, J.C.1
  • 4
    • 49149124212 scopus 로고    scopus 로고
    • The origin of modern terrestrial life
    • Forterre P., and Gribaldo S. The origin of modern terrestrial life HFSP J. 1 2007 156 168
    • (2007) HFSP J. , vol.1 , pp. 156-168
    • Forterre, P.1    Gribaldo, S.2
  • 6
    • 0032189214 scopus 로고    scopus 로고
    • Bacterial and archeal type i topoisomerases
    • Tse-Dinh Y.C. Bacterial and archeal type I topoisomerases Biochim. Biophys. Acta 1400 1998 19 27
    • (1998) Biochim. Biophys. Acta , vol.1400 , pp. 19-27
    • Tse-Dinh, Y.C.1
  • 10
    • 0027976667 scopus 로고
    • Decatenating activity of Escherichia coli DNA gyrase and topoisomerases I and III during oriC and pBR322 DNA replication in vitro
    • Hiasa H., DiGate R.J., and Marians K.J. Decatenating activity of Escherichia coli DNA gyrase and topoisomerases I and III during oriC and pBR322 DNA replication in vitro J. Biol. Chem. 269 1994 2093 2099 (Pubitemid 24035419)
    • (1994) Journal of Biological Chemistry , vol.269 , Issue.3 , pp. 2093-2099
    • Hiasa, H.1    DiGate, R.J.2    Marians, K.J.3
  • 12
    • 0000239569 scopus 로고
    • High positive supercoiling in vitro catalyzed by an ATP and polyethylene glycol-stimulated topoisomerase from Sulfolobus acidocaldarius
    • Forterre P., Mirambeau G., Jaxel C., Nadal M., and Duguet M. High positive supercoiling in vitro catalyzed by an ATP and polyethylene glycol-stimulated topoisomerase from Sulfolobus acidocaldarius EMBO J. 4 1985 2123 2128
    • (1985) EMBO J. , vol.4 , pp. 2123-2128
    • Forterre, P.1    Mirambeau, G.2    Jaxel, C.3    Nadal, M.4    Duguet, M.5
  • 13
    • 0021154312 scopus 로고
    • Reverse gyrase - A topoisomerase which introduces positive superhelical turns into DNA
    • Kikuchi A., and Asai K. Reverse gyrase-a topoisomerase which introduces positive superhelical turns into DNA Nature 309 1984 677 681 (Pubitemid 14109411)
    • (1984) Nature , vol.309 , Issue.5970 , pp. 677-681
    • Kikuchi, A.1    Asai, K.2
  • 16
    • 0036574857 scopus 로고    scopus 로고
    • A hot story from comparative genomics: Reverse gyrase is the only hyperthermophile-specific protein
    • Forterre P. A hot story from comparative genomics: reverse gyrase is the only hyperthermophile-specific protein Trends Genet. 18 2002 236 237
    • (2002) Trends Genet. , vol.18 , pp. 236-237
    • Forterre, P.1
  • 17
    • 3042814762 scopus 로고    scopus 로고
    • Reverse gyrase is not a prerequisite for hyperthermophilic life
    • DOI 10.1128/JB.186.14.4829-4833.2004
    • Atomi H., Matsumi R., and Imanaka T. Reverse gyrase is not a prerequisite for hyperthermophilic life J. Bacteriol. 186 2004 4829 4833 (Pubitemid 38891047)
    • (2004) Journal of Bacteriology , vol.186 , Issue.14 , pp. 4829-4833
    • Atomi, H.1    Matsumi, R.2    Imanaka, T.3
  • 18
    • 61449257456 scopus 로고    scopus 로고
    • Adaptations to submarine hydrothermal environments exemplified by the genome of Nautilia profundicola
    • Campbell B.J., Smith J.L., Hanson T.E., Klotz M.G., Stein L.Y., and Lee C.K. Adaptations to submarine hydrothermal environments exemplified by the genome of Nautilia profundicola PLoS Genet. 5 2009 e1000362
    • (2009) PLoS Genet. , vol.5 , pp. 1000362
    • Campbell, B.J.1    Smith, J.L.2    Hanson, T.E.3    Klotz, M.G.4    Stein, L.Y.5    Lee, C.K.6
  • 20
    • 0029826565 scopus 로고    scopus 로고
    • Reverse gyrase gene from Sulfolobus shibatae B12: Gene structure, transcription unit and comparative sequence analysis of the two domains
    • Jaxel C., Bouthier de la Tour C., Duguet M., and Nadal M. Reverse gyrase gene from Sulfolobus shibatae B12: gene structure, transcription unit and comparative sequence analysis of the two domains Nucleic Acids Res. 24 1996 4668 4675 (Pubitemid 26413343)
    • (1996) Nucleic Acids Research , vol.24 , Issue.23 , pp. 4668-4675
    • Jaxel, C.1    Bouthier De La Tour, C.2    Duguet, M.3    Nadal, M.4
  • 21
    • 78650040991 scopus 로고    scopus 로고
    • Separate and combined biochemical activities of the subunits of a naturally split reverse gyrase
    • Capp C., Qian Y., Sage H., Huber H., and Hsieh T.S. Separate and combined biochemical activities of the subunits of a naturally split reverse gyrase J. Biol. Chem. 285 2010 39637 39645
    • (2010) J. Biol. Chem. , vol.285 , pp. 39637-39645
    • Capp, C.1    Qian, Y.2    Sage, H.3    Huber, H.4    Hsieh, T.S.5
  • 23
    • 34247523662 scopus 로고    scopus 로고
    • Reverse gyrase: An insight into the role of DNA-topoisomerases
    • DOI 10.1016/j.biochi.2006.12.010, PII S0300908407000077, DNA Topology DNA, more than just a ladder: A tribute to Michel Duguet
    • Nadal M. Reverse gyrase: an insight into the role of DNA-topoisomerases Biochimie 89 2007 447 455 (Pubitemid 46656305)
    • (2007) Biochimie , vol.89 , Issue.4 , pp. 447-455
    • Nadal, M.1
  • 25
    • 34250896106 scopus 로고    scopus 로고
    • Widespread distribution of archaeal reverse gyrase in thermophilic bacteria suggests a complex history of vertical inheritance and lateral gene transfers
    • Brochier-Armanet C., and Forterre P. Widespread distribution of archaeal reverse gyrase in thermophilic bacteria suggests a complex history of vertical inheritance and lateral gene transfers Archaea 2 2007 83 93 (Pubitemid 46972046)
    • (2007) Archaea , vol.2 , Issue.2 , pp. 83-93
    • Brochier-Armanet, C.1    Forterre, P.2
  • 26
    • 55949089364 scopus 로고    scopus 로고
    • Transcriptional analysis of the two reverse gyrase encoding genes of Sulfolobus solfataricus P2 in relation to the growth phases and temperature conditions
    • Garnier F., and Nadal M. Transcriptional analysis of the two reverse gyrase encoding genes of Sulfolobus solfataricus P2 in relation to the growth phases and temperature conditions Extremophiles 12 2008 799 809
    • (2008) Extremophiles , vol.12 , pp. 799-809
    • Garnier, F.1    Nadal, M.2
  • 27
    • 33645837828 scopus 로고    scopus 로고
    • Oligonucleotide cleavage and rejoining by topoisomerase III from the hyperthermophilic archaeon Sulfolobus solfataricus: Temperature dependence and strand annealing-promoted DNA religation
    • Chen L., and Huang L. Oligonucleotide cleavage and rejoining by topoisomerase III from the hyperthermophilic archaeon Sulfolobus solfataricus: temperature dependence and strand annealing-promoted DNA religation Mol. Microbiol. 60 2006 783 794
    • (2006) Mol. Microbiol. , vol.60 , pp. 783-794
    • Chen, L.1    Huang, L.2
  • 28
    • 0041335376 scopus 로고    scopus 로고
    • DNA topoisomerase III from the hyperthermophilic archaeon Sulfolobus solfataricus with specific DNA cleavage activity
    • DOI 10.1128/JB.185.18.5500-5507.2003
    • Dai P., Wang Y., Ye R., Chen L., and Huang L. DNA topoisomerase III from the hyperthermophilic archaeon Sulfolobus solfataricus with specific DNA cleavage activity J. Bacteriol. 185 2003 5500 5507 (Pubitemid 37082407)
    • (2003) Journal of Bacteriology , vol.185 , Issue.18 , pp. 5500-5507
    • Dai, P.1    Wang, Y.2    Ye, R.3    Chen, L.4    Huang, L.5
  • 32
    • 20144362750 scopus 로고    scopus 로고
    • Nucleotide- and stoichiometry-dependent DNA supercoiling by reverse gyrase
    • DOI 10.1074/jbc.M502739200
    • Hsieh T.S., and Capp C. Nucleotide- and stoichiometry-dependent DNA supercoiling by reverse gyrase J. Biol. Chem. 280 2005 20467 20475 (Pubitemid 40776746)
    • (2005) Journal of Biological Chemistry , vol.280 , Issue.21 , pp. 20467-20475
    • Hsieh, T.-S.1    Capp, C.2
  • 33
    • 0037119393 scopus 로고    scopus 로고
    • Studies of a positive supercoiling machine. Nucleotide hydrolysis and a multifunctional "latch" in the mechanism of reverse gyrase
    • Rodriguez A.C. Studies of a positive supercoiling machine. Nucleotide hydrolysis and a multifunctional "latch" in the mechanism of reverse gyrase J. Biol. Chem. 277 2002 29865 29873
    • (2002) J. Biol. Chem. , vol.277 , pp. 29865-29873
    • Rodriguez, A.C.1
  • 34
    • 0037508506 scopus 로고    scopus 로고
    • Investigating the role of the latch in the positive supercoiling mechanism of reverse gyrase
    • DOI 10.1021/bi034188l
    • Rodriguez A.C. Investigating the role of the latch in the positive supercoiling mechanism of reverse gyrase Biochemistry 42 2003 5993 6004 (Pubitemid 36605102)
    • (2003) Biochemistry , vol.42 , Issue.20 , pp. 5993-6004
    • Rodriguez, A.C.1
  • 35
    • 49249126751 scopus 로고    scopus 로고
    • Dissection of reverse gyrase activities: Insight into the evolution of a thermostable molecular machine
    • Valenti A., Perugino G., D'Amaro A., Cacace A., Napoli A., Rossi M., and Ciaramella M. Dissection of reverse gyrase activities: insight into the evolution of a thermostable molecular machine Nucleic Acids Res. 36 2008 4587 4597
    • (2008) Nucleic Acids Res. , vol.36 , pp. 4587-4597
    • Valenti, A.1    Perugino, G.2    D'Amaro, A.3    Cacace, A.4    Napoli, A.5    Rossi, M.6    Ciaramella, M.7
  • 36
    • 0024298593 scopus 로고
    • Reverse gyrase of Sulfolobus: Purification to homogeneity and characterization
    • Nadal M., Jaxel C., Portemer C., Forterre P., Mirambeau G., and Duguet M. Reverse gyrase of Sulfolobus: purification to homogeneity and characterization Biochemistry 27 1988 9102 9108
    • (1988) Biochemistry , vol.27 , pp. 9102-9108
    • Nadal, M.1    Jaxel, C.2    Portemer, C.3    Forterre, P.4    Mirambeau, G.5    Duguet, M.6
  • 37
    • 0027238534 scopus 로고
    • The helical repeat of DNA at high temperature
    • Duguet M. The helical repeat of DNA at high temperature Nucleic Acids Res. 21 1993 463 468 (Pubitemid 23155532)
    • (1993) Nucleic Acids Research , vol.21 , Issue.3 , pp. 463-468
    • Duguet, M.1
  • 38
    • 0024396712 scopus 로고
    • Reverse gyrase binding to DNA alters the double helix structure and produces single-strand cleavage in the absence of ATP
    • Jaxel C., Nadal M., Mirambeau G., Forterre P., Takahashi M., and Duguet M. Reverse gyrase binding to DNA alters the double helix structure and produces single-strand cleavage in the absence of ATP EMBO J. 8 1989 3135 3139 (Pubitemid 19275015)
    • (1989) EMBO Journal , vol.8 , Issue.10 , pp. 3135-3139
    • Jaxel, C.1    Nadal, M.2    Mirambeau, G.3    Forterre, P.4    Takahashi, M.5    Duguet, M.6
  • 40
    • 34447103886 scopus 로고    scopus 로고
    • Adenosine 5′-O-(3-thio)triphosphate (ATPγS) Promotes Positive Supercoiling of DNA by T. maritima Reverse Gyrase
    • DOI 10.1016/j.jmb.2007.05.031, PII S0022283607006560
    • Jungblut S.P., and Klostermeier D. Adenosine 5′-O-(3-thio) triphosphate (ATPγS) promotes positive supercoiling of DNA by T. maritima reverse gyrase J. Mol. Biol. 371 2007 197 209 (Pubitemid 47030463)
    • (2007) Journal of Molecular Biology , vol.371 , Issue.1 , pp. 197-209
    • Jungblut, S.P.1    Klostermeier, D.2
  • 41
    • 0027992338 scopus 로고
    • Purification and characterization of reverse gyrase from Sulfolobus shibatae. Its proteolytic product appears as an ATP-independent topoisomerase
    • Nadal M., Couderc E., Duguet M., and Jaxel C. Purification and characterization of reverse gyrase from Sulfolobus shibatae. Its proteolytic product appears as an ATP-independent topoisomerase J. Biol. Chem. 269 1994 5255 5263
    • (1994) J. Biol. Chem. , vol.269 , pp. 5255-5263
    • Nadal, M.1    Couderc, E.2    Duguet, M.3    Jaxel, C.4
  • 42
    • 0000527880 scopus 로고
    • Reverse gyrase; ATP-dependent type i topoisomerase from Sulfolobus
    • Nakasu S., and Kikuchi A. Reverse gyrase; ATP-dependent type I topoisomerase from Sulfolobus EMBO J. 4 1985 2705 2710
    • (1985) EMBO J. , vol.4 , pp. 2705-2710
    • Nakasu, S.1    Kikuchi, A.2
  • 43
    • 0031936513 scopus 로고    scopus 로고
    • Reverse gyrase from the hyperthermophilic bacterium Thermotoga maritima: Properties and gene structure
    • Bouthier de la Tour C., Portemer C., Kaltoum H., and Duguet M. Reverse gyrase from the hyperthermophilic bacterium Thermotoga maritima: properties and gene structure J. Bacteriol. 180 1998 274 281 (Pubitemid 28100292)
    • (1998) Journal of Bacteriology , vol.180 , Issue.2 , pp. 274-281
    • De La Tour, C.B.1    Portemer, C.2    Kaltoum, H.3    Duguet, M.4
  • 45
    • 0022449038 scopus 로고
    • Positively supercoiled DNA in a virus-like particle of an archaebacterium
    • Nadal M., Mirambeau G., Forterre P., Reiter W.D., and Duguet M. Positively supercoiled DNA in a virus-like particle of an archaebacterium Nature 321 1986 256 258 (Pubitemid 16016422)
    • (1986) Nature , vol.321 , Issue.6067 , pp. 256-258
    • Nadal, M.1    Mirambeau, G.2    Forterre, P.3
  • 46
    • 33646832425 scopus 로고    scopus 로고
    • Reverse gyrase functions as a DNA renaturase: Annealing of complementary single-stranded circles and positive supercoiling of a bubble substrate
    • DOI 10.1074/jbc.M513252200
    • Hsieh T.S., and Plank J.L. Reverse gyrase functions as a DNA renaturase: annealing of complementary single-stranded circles and positive supercoiling of a bubble substrate J. Biol. Chem. 281 2006 5640 5647 (Pubitemid 43847661)
    • (2006) Journal of Biological Chemistry , vol.281 , Issue.9 , pp. 5640-5647
    • Hsieh, T.-S.1    Plank, J.L.2
  • 47
    • 71449117734 scopus 로고    scopus 로고
    • Helicase-appended topoisomerases: New insight into the mechanism of directional strand-transfer
    • Hsieh T.S., and Plank J.L. Helicase-appended topoisomerases: new insight into the mechanism of directional strand-transfer J. Biol. Chem. 284 2009 30737 30741
    • (2009) J. Biol. Chem. , vol.284 , pp. 30737-30741
    • Hsieh, T.S.1    Plank, J.L.2
  • 48
    • 3142753959 scopus 로고    scopus 로고
    • Reverse gyrase has heat-protective DNA chaperone activity independent of supercoiling
    • DOI 10.1093/nar/gkh683
    • Kampmann M., and Stock D. Reverse gyrase has heat-protective DNA chaperone activity independent of supercoiling Nucleic Acids Res. 32 2004 3537 3545 (Pubitemid 39161867)
    • (2004) Nucleic Acids Research , vol.32 , Issue.12 , pp. 3537-3545
    • Kampmann, M.1    Stock, D.2
  • 49
    • 78449263077 scopus 로고    scopus 로고
    • The archaeal topoisomerase reverse gyrase is a helix-destabilizing protein that unwinds four-way DNA junctions
    • Valenti A., Perugino G., Varriale A., D'Auria S., Rossi M., and Ciaramella M. The archaeal topoisomerase reverse gyrase is a helix-destabilizing protein that unwinds four-way DNA junctions J. Biol. Chem. 285 2010 36532 36541
    • (2010) J. Biol. Chem. , vol.285 , pp. 36532-36541
    • Valenti, A.1    Perugino, G.2    Varriale, A.3    D'Auria, S.4    Rossi, M.5    Ciaramella, M.6
  • 51
    • 13744263542 scopus 로고    scopus 로고
    • Functional interaction of reverse gyrase with single-strand binding protein of the archaeon Sulfolobus
    • DOI 10.1093/nar/gki202
    • Napoli A., Valenti A., Salerno V., Nadal M., Garnier F., Rossi M., and Ciaramella M. Functional interaction of reverse gyrase with single-strand binding protein of the archaeon Sulfolobus Nucleic Acids Res. 33 2005 564 576 (Pubitemid 40360986)
    • (2005) Nucleic Acids Research , vol.33 , Issue.2 , pp. 564-576
    • Napoli, A.1    Valenti, A.2    Salerno, V.3    Nadal, M.4    Garnier, F.5    Rossi, M.6    Ciaramella, M.7


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