메뉴 건너뛰기




Volumn 6, Issue 4, 2011, Pages

Co-crystal structures of pkg iβ (92-227) with cgmp and camp reveal the molecular details of cyclic-nucleotide binding

Author keywords

[No Author keywords available]

Indexed keywords

CYCLIC AMP; CYCLIC GMP; CYCLIC GMP DEPENDENT PROTEIN KINASE; CYCLIC GMP DEPENDENT PROTEIN KINASE 1BETA; CYCLIC NUCLEOTIDE; CYSTEINE; LEUCINE; PHOSPHATE BINDING PROTEIN; THREONINE; UNCLASSIFIED DRUG; APOPROTEIN; CGMP DEPENDENT PROTEIN KINASE IALPHA; CGMP-DEPENDENT PROTEIN KINASE IALPHA; CYCLIC AMP DEPENDENT PROTEIN KINASE REGULATORY SUBUNIT IALPHA; LIGAND;

EID: 79955383172     PISSN: None     EISSN: 19326203     Source Type: Journal    
DOI: 10.1371/journal.pone.0018413     Document Type: Article
Times cited : (52)

References (39)
  • 1
    • 0034033975 scopus 로고    scopus 로고
    • Rising behind NO: cGMP-dependent protein kinases
    • Hofmann F, Ammendola A, Schlossmann J, (2000) Rising behind NO: cGMP-dependent protein kinases. J Cell Sci 113: 1671-1676.
    • (2000) J Cell Sci , vol.113 , pp. 1671-1676
    • Hofmann, F.1    Ammendola, A.2    Schlossmann, J.3
  • 3
    • 33644834949 scopus 로고    scopus 로고
    • Function of cGMP-dependent protein kinases as revealed by gene deletion
    • Hofmann F, Feil R, Kleppisch T, Schlossmann J, (2006) Function of cGMP-dependent protein kinases as revealed by gene deletion. Physiol Rev 86: 1-23.
    • (2006) Physiol Rev , vol.86 , pp. 1-23
    • Hofmann, F.1    Feil, R.2    Kleppisch, T.3    Schlossmann, J.4
  • 4
    • 0022635692 scopus 로고
    • Studies of cGMP analog specificity and function of the two intrasubunit binding sites of cGMP-dependent protein kinase
    • Corbin JD, Øgreid D, Miller JP, Suva RH, Jastorff B, et al. (1986) Studies of cGMP analog specificity and function of the two intrasubunit binding sites of cGMP-dependent protein kinase. J Biol Chem 261: 1208-1214.
    • (1986) J Biol Chem , vol.261 , pp. 1208-1214
    • Corbin, J.D.1    Øgreid, D.2    Miller, J.P.3    Suva, R.H.4    Jastorff, B.5
  • 5
    • 0030037847 scopus 로고    scopus 로고
    • Fast and slow cyclic nucleotide-dissociation sites in cAMP-dependent protein kinase are transposed in type Ibeta cGMP-dependent protein kinase
    • Reed RB, Sandberg M, Jahnsen T, Lohmann SM, Francis SH, et al. (1996) Fast and slow cyclic nucleotide-dissociation sites in cAMP-dependent protein kinase are transposed in type Ibeta cGMP-dependent protein kinase. J Biol Chem 271: 17570-17575.
    • (1996) J Biol Chem , vol.271 , pp. 17570-17575
    • Reed, R.B.1    Sandberg, M.2    Jahnsen, T.3    Lohmann, S.M.4    Francis, S.H.5
  • 6
    • 37549038284 scopus 로고    scopus 로고
    • cGMP-binding prepares PKG for substrate binding by disclosing the C-terminal domain
    • Alverdi V, Mazon H, Versluis C, Hemrika W, Esposito G, et al. (2008) cGMP-binding prepares PKG for substrate binding by disclosing the C-terminal domain. J Mol Biol 375: 1380-1393.
    • (2008) J Mol Biol , vol.375 , pp. 1380-1393
    • Alverdi, V.1    Mazon, H.2    Versluis, C.3    Hemrika, W.4    Esposito, G.5
  • 7
    • 0025914242 scopus 로고
    • Crystal structure of a CAP-DNA complex: the DNA is bent by 90 degrees
    • Schultz SC, Shields GC, Steitz TA, (1991) Crystal structure of a CAP-DNA complex: the DNA is bent by 90 degrees. Science 253: 1001-1007.
    • (1991) Science , vol.253 , pp. 1001-1007
    • Schultz, S.C.1    Shields, G.C.2    Steitz, T.A.3
  • 8
    • 0029143803 scopus 로고
    • Regulatory subunit of protein kinase A: structure of deletion mutant with cAMP binding domains
    • Su Y, Dostmann WR, Herberg FW, Durick K, Xuong NH, et al. (1995) Regulatory subunit of protein kinase A: structure of deletion mutant with cAMP binding domains. Science 269: 807-813.
    • (1995) Science , vol.269 , pp. 807-813
    • Su, Y.1    Dostmann, W.R.2    Herberg, F.W.3    Durick, K.4    Xuong, N.H.5
  • 9
    • 0141831003 scopus 로고    scopus 로고
    • Structural basis for modulation and agonist specificity of HCN pacemaker channels
    • Zagotta WN, Olivier NB, Black KD, Young EC, Olson R, et al. (2003) Structural basis for modulation and agonist specificity of HCN pacemaker channels. Nature 425: 200-205.
    • (2003) Nature , vol.425 , pp. 200-205
    • Zagotta, W.N.1    Olivier, N.B.2    Black, K.D.3    Young, E.C.4    Olson, R.5
  • 11
    • 0032848914 scopus 로고    scopus 로고
    • Cyclic nucleotide-dependent protein kinases: intracellular receptors for cAMP and cGMP action
    • Francis SH, Corbin JD, (1999) Cyclic nucleotide-dependent protein kinases: intracellular receptors for cAMP and cGMP action. Crit Rev Clin Lab Sci 36: 275-328.
    • (1999) Crit Rev Clin Lab Sci , vol.36 , pp. 275-328
    • Francis, S.H.1    Corbin, J.D.2
  • 12
    • 13244291292 scopus 로고    scopus 로고
    • Crystal structure of a complex between the catalytic and regulatory (RIalpha) subunits of PKA
    • Kim C, Xuong NH, Taylor SS, (2005) Crystal structure of a complex between the catalytic and regulatory (RIalpha) subunits of PKA. Science 307: 690-696.
    • (2005) Science , vol.307 , pp. 690-696
    • Kim, C.1    Xuong, N.H.2    Taylor, S.S.3
  • 13
    • 34548611290 scopus 로고    scopus 로고
    • PKA-I Holoenzyme Structure Reveals a Mechanism for cAMP-Dependent Activation
    • Kim C, Cheng CY, Saldanha SA, Taylor SS, (2007) PKA-I Holoenzyme Structure Reveals a Mechanism for cAMP-Dependent Activation. Cell 130: 1032-1043.
    • (2007) Cell , vol.130 , pp. 1032-1043
    • Kim, C.1    Cheng, C.Y.2    Saldanha, S.A.3    Taylor, S.S.4
  • 14
    • 29344434948 scopus 로고    scopus 로고
    • A simple electrostatic switch important in the activation of type I protein kinase A by cyclic AMP
    • Vigil D, Lin JH, Sotriffer CA, Pennypacker JK, McCammon JA, et al. (2006) A simple electrostatic switch important in the activation of type I protein kinase A by cyclic AMP. Protein Sci 15: 113-121.
    • (2006) Protein Sci , vol.15 , pp. 113-121
    • Vigil, D.1    Lin, J.H.2    Sotriffer, C.A.3    Pennypacker, J.K.4    McCammon, J.A.5
  • 15
    • 0026321604 scopus 로고
    • Mutating protein kinase cAMP-binding sites into cGMP-binding sites. Mechanism of cGMP selectivity
    • Shabb JB, Buzzeo BD, Ng L, Corbin JD, (1991) Mutating protein kinase cAMP-binding sites into cGMP-binding sites. Mechanism of cGMP selectivity. J Biol Chem 266: 24320-24326.
    • (1991) J Biol Chem , vol.266 , pp. 24320-24326
    • Shabb, J.B.1    Buzzeo, B.D.2    Ng, L.3    Corbin, J.D.4
  • 16
    • 0024346576 scopus 로고
    • Predicted structures of the cGMP binding domains of the cGMP-dependent protein kinase: a key alanine/threonine difference in evolutionary divergence of cAMP and cGMP binding sites
    • Weber IT, Shabb JB, Corbin JD, (1989) Predicted structures of the cGMP binding domains of the cGMP-dependent protein kinase: a key alanine/threonine difference in evolutionary divergence of cAMP and cGMP binding sites. Biochemistry 28: 6122-6127.
    • (1989) Biochemistry , vol.28 , pp. 6122-6127
    • Weber, I.T.1    Shabb, J.B.2    Corbin, J.D.3
  • 17
    • 0025946606 scopus 로고
    • Control of ligand specificity in cyclic nucleotide-gated channels from rod photoreceptors and olfactory epithelium
    • Altenhofen W, Ludwig J, Eismann E, Kraus W, Bönigk W, et al. (1991) Control of ligand specificity in cyclic nucleotide-gated channels from rod photoreceptors and olfactory epithelium. Proc Natl Acad Sci U S A 88: 9868-9872.
    • (1991) Proc Natl Acad Sci U S A , vol.88 , pp. 9868-9872
    • Altenhofen, W.1    Ludwig, J.2    Eismann, E.3    Kraus, W.4    Bönigk, W.5
  • 18
    • 0017377966 scopus 로고
    • Determination of the syn-anti equilibrium of some purine 3':5'-nucleotides by nuclear-magnetic-relaxation perturbation in the presence of a lanthanide-ion probe
    • Fazakerley GV, Russell JC, Wolfe MA, (1977) Determination of the syn-anti equilibrium of some purine 3':5'-nucleotides by nuclear-magnetic-relaxation perturbation in the presence of a lanthanide-ion probe. Eur J Biochem 76: 601-605.
    • (1977) Eur J Biochem , vol.76 , pp. 601-605
    • Fazakerley, G.V.1    Russell, J.C.2    Wolfe, M.A.3
  • 19
    • 0015946837 scopus 로고
    • Conformations of cyclic 3',5'-nucleotides. Effect of the base on the synanti conformer distribution
    • Yathindra N, Sundaralingam M, (1974) Conformations of cyclic 3',5'-nucleotides. Effect of the base on the synanti conformer distribution. Biochem Biophys Res Commun 56: 119-126.
    • (1974) Biochem Biophys Res Commun , vol.56 , pp. 119-126
    • Yathindra, N.1    Sundaralingam, M.2
  • 20
    • 2942527724 scopus 로고    scopus 로고
    • RIalpha subunit of PKA: a cAMP-free structure reveals a hydrophobic capping mechanism for docking cAMP into site B. Structure
    • Wu J, Brown S, Xuong NH, Taylor SS, (2004) RIalpha subunit of PKA: a cAMP-free structure reveals a hydrophobic capping mechanism for docking cAMP into site B. Structure 12: 1057-1065.
    • (2004) , vol.12 , pp. 1057-1065
    • Wu, J.1    Brown, S.2    Xuong, N.H.3    Taylor, S.S.4
  • 21
    • 0026080004 scopus 로고
    • Oxidation of cysteines activates cGMP-dependent protein kinase
    • Landgraf W, Regulla S, Meyer HE, Hofmann F, (1991) Oxidation of cysteines activates cGMP-dependent protein kinase. J Biol Chem 266: 16305-16311.
    • (1991) J Biol Chem , vol.266 , pp. 16305-16311
    • Landgraf, W.1    Regulla, S.2    Meyer, H.E.3    Hofmann, F.4
  • 22
    • 0031454332 scopus 로고    scopus 로고
    • Activation by cyclic GMP binding causes an apparent conformational change in cGMP-dependent protein kinase
    • Chu DM, Corbin JD, Grimes KA, Francis SH, (1997) Activation by cyclic GMP binding causes an apparent conformational change in cGMP-dependent protein kinase. J Biol Chem 272: 31922-31928.
    • (1997) J Biol Chem , vol.272 , pp. 31922-31928
    • Chu, D.M.1    Corbin, J.D.2    Grimes, K.A.3    Francis, S.H.4
  • 23
    • 0037072751 scopus 로고    scopus 로고
    • A conserved serine juxtaposed to the pseudosubstrate site of type I cGMP-dependent protein kinase contributes strongly to autoinhibition and lower cGMP affinity
    • Busch JL, Bessay EP, Francis SH, Corbin JD, (2002) A conserved serine juxtaposed to the pseudosubstrate site of type I cGMP-dependent protein kinase contributes strongly to autoinhibition and lower cGMP affinity. J Biol Chem 277: 34048-34054.
    • (2002) J Biol Chem , vol.277 , pp. 34048-34054
    • Busch, J.L.1    Bessay, E.P.2    Francis, S.H.3    Corbin, J.D.4
  • 24
    • 0021949208 scopus 로고
    • cGMP-dependent protein kinase. Autophosphorylation changes the characteristics of binding site 1
    • Hofmann F, Gensheimer HP, Göbel C, (1985) cGMP-dependent protein kinase. Autophosphorylation changes the characteristics of binding site 1. Eur J Biochem 147: 361-365.
    • (1985) Eur J Biochem , vol.147 , pp. 361-365
    • Hofmann, F.1    Gensheimer, H.P.2    Göbel, C.3
  • 25
    • 33646374669 scopus 로고    scopus 로고
    • Isolated regulatory domains of cGMP-dependent protein kinase Ialpha and Ibeta retain dimerization and native cGMP-binding properties and undergo isoform-specific conformational changes
    • Richie-Jannetta R, Busch JL, Higgins KA, Corbin JD, Francis SH, (2006) Isolated regulatory domains of cGMP-dependent protein kinase Ialpha and Ibeta retain dimerization and native cGMP-binding properties and undergo isoform-specific conformational changes. J Biol Chem 281: 6977-6984.
    • (2006) J Biol Chem , vol.281 , pp. 6977-6984
    • Richie-Jannetta, R.1    Busch, J.L.2    Higgins, K.A.3    Corbin, J.D.4    Francis, S.H.5
  • 26
    • 0034614502 scopus 로고    scopus 로고
    • Distinguishing the roles of the two different cGMP-binding sites for modulating phosphorylation of exogenous substrate (heterophosphorylation) and autophosphorylation of cGMP-dependent protein kinase
    • Smith JA, Reed RB, Francis SH, Grimes K, Corbin JD, (2000) Distinguishing the roles of the two different cGMP-binding sites for modulating phosphorylation of exogenous substrate (heterophosphorylation) and autophosphorylation of cGMP-dependent protein kinase. J Biol Chem 275: 154-158.
    • (2000) J Biol Chem , vol.275 , pp. 154-158
    • Smith, J.A.1    Reed, R.B.2    Francis, S.H.3    Grimes, K.4    Corbin, J.D.5
  • 27
    • 0346118927 scopus 로고    scopus 로고
    • Dimerization of cGMP-dependent protein kinase Ibeta is mediated by an extensive amino-terminal leucine zipper motif, and dimerization modulates enzyme function
    • Richie-Jannetta R, Francis SH, Corbin JD, (2003) Dimerization of cGMP-dependent protein kinase Ibeta is mediated by an extensive amino-terminal leucine zipper motif, and dimerization modulates enzyme function. J Biol Chem 278: 50070-50079.
    • (2003) J Biol Chem , vol.278 , pp. 50070-50079
    • Richie-Jannetta, R.1    Francis, S.H.2    Corbin, J.D.3
  • 28
    • 0026338481 scopus 로고
    • The activation of expressed cGMP-dependent protein kinase isozymes I alpha and I beta is determined by the different amino-termini
    • Ruth P, Landgraf W, Keilbach A, May B, Egleme C, et al. (1991) The activation of expressed cGMP-dependent protein kinase isozymes I alpha and I beta is determined by the different amino-termini. Eur J Biochem 202: 1339-1344.
    • (1991) Eur J Biochem , vol.202 , pp. 1339-1344
    • Ruth, P.1    Landgraf, W.2    Keilbach, A.3    May, B.4    Egleme, C.5
  • 29
    • 0024523027 scopus 로고
    • Characterization of a novel isozyme of cGMP-dependent protein kinase from bovine aorta
    • Wolfe L, Corbin JD, Francis SH, (1989) Characterization of a novel isozyme of cGMP-dependent protein kinase from bovine aorta. J Biol Chem 264: 7734-7741.
    • (1989) J Biol Chem , vol.264 , pp. 7734-7741
    • Wolfe, L.1    Corbin, J.D.2    Francis, S.H.3
  • 30
    • 0024593414 scopus 로고
    • Properties of a cGMP-dependent monomeric protein kinase from bovine aorta
    • Wolfe L, Francis SH, Corbin JD, (1989) Properties of a cGMP-dependent monomeric protein kinase from bovine aorta. J Biol Chem 264: 4157-4162.
    • (1989) J Biol Chem , vol.264 , pp. 4157-4162
    • Wolfe, L.1    Francis, S.H.2    Corbin, J.D.3
  • 32
    • 0030888277 scopus 로고    scopus 로고
    • Identification of the amino acid sequences responsible for high affinity activation of cGMP kinase Ialpha
    • Ruth P, Pfeifer A, Kamm S, Klatt P, Dostmann WR, et al. (1997) Identification of the amino acid sequences responsible for high affinity activation of cGMP kinase Ialpha. J Biol Chem 272: 10522-10528.
    • (1997) J Biol Chem , vol.272 , pp. 10522-10528
    • Ruth, P.1    Pfeifer, A.2    Kamm, S.3    Klatt, P.4    Dostmann, W.R.5
  • 33
    • 26844532090 scopus 로고    scopus 로고
    • Structural genomics of human proteins-target selection and generation of a public catalogue of expression clones
    • Büssow K, Scheich C, Sievert V, Harttig U, Schultz J, et al. (2005) Structural genomics of human proteins-target selection and generation of a public catalogue of expression clones. Microb Cell Fact 4: 21.
    • (2005) Microb Cell Fact , vol.4 , pp. 21
    • Büssow, K.1    Scheich, C.2    Sievert, V.3    Harttig, U.4    Schultz, J.5
  • 35
  • 36
    • 0035182073 scopus 로고    scopus 로고
    • Use of TLS parameters to model anisotropic displacements in macromolecular refinement
    • Winn MD, Isupov MN, Murshudov GN, (2001) Use of TLS parameters to model anisotropic displacements in macromolecular refinement. Acta Crystallogr D Biol Crystallogr 57: 122-133.
    • (2001) Acta Crystallogr D Biol Crystallogr , vol.57 , pp. 122-133
    • Winn, M.D.1    Isupov, M.N.2    Murshudov, G.N.3
  • 39
    • 77951623055 scopus 로고    scopus 로고
    • Super-resolution biomolecular crystallography with low-resolution data
    • Schröder GF, Levitt M, Brunger AT, (2010) Super-resolution biomolecular crystallography with low-resolution data. Nature 464: 1218-1222.
    • (2010) Nature , vol.464 , pp. 1218-1222
    • Schröder, G.F.1    Levitt, M.2    Brunger, A.T.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.