The anti-apoptotic Bcl-xl protein, a new piece in the puzzle of cytochrome c interactome

PLoS ONE

Volumn 6, Issue 4, 2011, Pages

  Bertini, Ivano ^a   Chevance, Soizic ^a   Del Conte, Rebecca ^a   Lalli, Daniela ^a   Turano, Paola ^a  

^a UNIVERSITY OF FLORENCE   (Italy)

Author keywords

[No Author keywords available]

Indexed keywords

CYTOCHROME C; PROTEIN BAK; PROTEIN BCL XL; PROTEIN BCL X;

APOPTOSIS; ARTICLE; CYTOSOL; ELECTRON TRANSPORT; ENZYME STRUCTURE; INTRACELLULAR TRANSPORT; MOLECULAR INTERACTION; MOLECULAR MODEL; PROTEIN PROTEIN INTERACTION; PROTEIN TRANSPORT; CHEMICAL STRUCTURE; CHEMISTRY; HUMAN; METABOLISM; NUCLEAR MAGNETIC RESONANCE; PROTEIN BINDING; STATIC ELECTRICITY;

APOPTOSIS; BCL-X PROTEIN; CYTOCHROMES C; ELECTRON TRANSPORT; HUMANS; MODELS, MOLECULAR; NUCLEAR MAGNETIC RESONANCE, BIOMOLECULAR; PROTEIN BINDING; STATIC ELECTRICITY;

EID: 79955146862     PISSN: None     EISSN: 19326203     Source Type: Journal    
DOI: 10.1371/journal.pone.0018329     Document Type: Article

References (39)

1. Scott RA, Mauk AG, (1996) Cytochrome c. A multidisciplinary approach Sausalito, California University Science Books.
2. Bertini I, Cavallaro G, Rosato A, (2006) Cytochrome c: occurrence and functions. Chem Rev 106: 90-115.
3. Liu X, Kim CN, Yang J, Jemmerson R, Wang X, (1996) Induction of apoptotic program in cell-free extracts: requirement for dATP and cytochrome c. Cell (Cambridge,Mass) 86: 147-157.
4. Li P, Nijhawan D, Budihardjo I, Srinivasula SM, Ahmad M, et al. (1997) Cytochrome c and dATP-dependent formation of Apaf-1/caspase-9 complex initiates an apoptotic protease cascade. Cell (Cambridge,Mass) 91: 479-489.
5. Ott M, Robertson JD, Gogvadze V, Zhivotovsky B, Orrenius S, (2002) Cytochrome c release from mitochondria proceeds by a two-step process. Proc Natl Acad Sci USA 99: 1259-1263.
6. Iverson SL, Orrenius S, (2004) The cardiolipin-cytochrome c interaction and the mitochondrial regulation of apoptosis. Arch Biochem Biophys 423: 37-46.
7. Adams JM, Cory S, (1998) The Bcl-2 protein family: arbiters of cell survival. Science 281: 1322-1326.
8. Cory S, Adams JM, (2002) The Bcl-2 family: regulators of the cellular life-or-death switch. Nat Rev Cancer 2: 647-656.
9. Cory S, Huang DCS, Adams JM, (2003) The Bcl-2 family: roles in cell survival and oncogenesis. Oncogene 22: 8590-8607.
10. Hsu Y-T, Wolter KG, Youle RJ, (1997) Cytosol-to-membrane redistribution of Bax and Bcl-xL during apoptosis. Proc Natl Acad Sci USA 94: 3668-3672.
11. Leber B, Lin J, Andrews DW, (2010) Still embedded together binding to membranes regulates Bcl-2 protein interactions. Oncogene 29: 5221-5230.
12. Billen LP, Kokoski CL, Lovell JF, Leber B, Andrews DW, (2008) Bcl-xL inhibits membrane permeabilization by competing with Bax. PLoS Biol 6: e147.
13. Pan G, O'Rourke K, Dixit VM, (1998) Caspase-9, Bcl-xL, and Apaf-1 form a ternary complex. J Biol Chem 273: 5841-5845.
14. Hu Y, Benedict MA, Wu W, Inohara N, Nunez J, (1998) Bcl-xL interacts with Apaf-1 and inhibits Apaf-1-dependent caspase-9 activation. Proc Natl Acad Sci USA 95: 4386-4391.
15. Yadaiah M, Rao PN, Harish P, Bhuyan AK, (2007) High affinity binding of Bcl-xL to cytochrome c: possible relevance for interception of translocated cytochrome c in apoptosis. Biochim Biophys Acta 1774: 1370-1379.
16. Shao W, Im SC, Zuiderweg ER, Waskell L, (2003) Mapping the binding interface of the cytochrome b5-cytochrome c complex by nuclear magnetic resonance. Biochemistry 42: 14774-14784.
17. Volkov AN, Ferrari D, Worrall JA, Bonvin AM, Ubbink M, (2005) The orientations of cytochrome c in the highly dynamic complex with cytochrome b5 visualized by NMR and docking using HADDOCK. Protein Science 14: 799-811.
18. Cantor RC, Schimmel PR, (1980) Biophysical chemistry San Francisco Freeman, W.H.
19. de Vries SJ, van Dijk M, Bonvin AM, (2010) The HADDOCK web server for data-driven biomolecular docking. Nat Protoc 5: 883-897.
20. Bertini I, Cavallaro G, Rosato A, (2005) A structural model for the adduct between cytochrome c and cytochrome c oxidase. J Biol Inorg Chem 10: 613-624.
21. Muchmore SW, Sattler M, Liang H, Meadows RP, Harlan JE, et al. (1996) X-ray and NMR structure of human Bcl-xL, an inhibitor of programmed cell death. Nature 381: 335-341.
22. Sattler M, Liang H, Nettesheim D, Meadows RP, Harlan JE, et al. (1997) Structure of Bcl-xL-Bak peptide complex: recognition between regulators of apoptosis. Science 275: 983-986.
23. Brayer GD, Murphy MEP, (1996) Structural studies of eukariotic cytochromes c. In: Scott RA, Mauk AG, editors. Cytochrome c. A multidisciplinary approach Sausalito, California University Science Books pp. 103-166.
24. Banci L, Bertini I, Rosato A, Varani G, (1999) Mitochondrial cytochromes c: a comparative analysis. J Biol Inorg Chem 4: 824-837.
25. Jeng WY, Chen CY, Chang HC, Chuang WJ, (2002) Expression and characterization of recombinant human cytochrome c in E. coli. J Bioenerg Biomembr 34: 423-431.
26. Morison IM, Cramer Bordè EM, Cheesman EJ, Cheong PL, Holyoake AJ, et al. (2008) A mutation of human cytochrome c enhances the intrinsic apoptotic pathway but causes only thrombocytopenia. Nat Genet 40: 387-389.
27. Olteanu A, Patel CN, Dedmon MM, Kennedy S, Linhoff MW, et al. (2003) Stability and apoptotic activity of recombinant human cytochrome c. Biochem Biophys Res Commun 312: 733-740.
28. Yu T, Wang X, Purring-Koch C, Wei Y, McLendon GL, (2001) A mutational epitope for cytochrome c binding to the apoptosis protease activation factor-1. J Biol Chem 276: 13034-13038.
29. Yuan S, Yu X, Topf M, Ludtke SJ, Wang X, et al. (2010)of an apoptosome-procaspase-9 CARD complex. Structure 18: 571-583.
30. Yuan S, Yu X, Topf M, Dorstyn L, Kumar S, et al. (2011) Structure of the Drosophila apoptosome at 6.9 Å resolution. Structure 19: 128-140.
31. Nooren IMA, Thornton JM, (2003) Diversity of protein-protein interactions. Embo Journal 22: 3486-3492.
32. Nooren IMA, Thornton JM, (2003) Structural characterisation and functional significance of transient protein-protein interactions. Journal of Molecular Biology 325: 991-1018.
33. Lange C, Hunte C, (2002) Crystal structure of the yeast cytochrome bc1 complex with its bound substrate cytochrome c. Proc Natl Acad Sci USA 99: 2800-2805.
34. Pelletier H, Kraut J, (1992) Crystal structure of a complex between electron transfer partners, cytochrome c peroxidase and cytochrome c. Science 258: 1748-1755.
35. Bertini I, Cavallaro G, Rosato A, (2011) Principles and patterns in the interaction between mono-heme cytochrome c and its partners in electron transfer processes. Epub ahead of print.
36. Wegerich F, Turano P, Allegrozzi M, Möhwald H, Lisdat F, (2009) Cytochrome c mutants for superoxide biosensors. Analytical Chemistry 81: 2976-2984.
37. Keller R, Wüthrich K (2002), (2002) A New Software for the Analysis of Protein NMR Spectra.
38. Petros AM, Fesik SW, Olejniczak ET, (2005) 1H, 13C and 15N resonance assignments of a Bcl-xL/Bad peptide complex. J Biomol NMR 32: 260.
39. Garrett DS, Seok YJ, Peterkofsky A, Clore GM, Gronenborn AM, (1997) Identification by NMR of the binding surface for the histidine-containing phosphocarrier protein HPr on the N-terminal domain of enzyme I of the Escherichia coli phosphotransferase system. Biochemistry 36: 4393-4398.