-
1
-
-
54249116230
-
Genetic regulatory mechanisms in the synthesis of proteins
-
Jacob F., Monod J. Genetic regulatory mechanisms in the synthesis of proteins. J. Mol. Biol. 1961, 3:318.
-
(1961)
J. Mol. Biol.
, vol.3
, pp. 318
-
-
Jacob, F.1
Monod, J.2
-
2
-
-
0004219679
-
-
Cold Spring Harbor, New York, J.R. Beckwith, D. Zipser (Eds.)
-
The Lactose Operon, Cold Spring Harbor Laboratory 1970, Cold Spring Harbor, New York. J.R. Beckwith, D. Zipser (Eds.).
-
(1970)
The Lactose Operon, Cold Spring Harbor Laboratory
-
-
-
3
-
-
84968834928
-
-
Cold Spring Harbor, New York, J.H. Miller, W.S. Reznikoff (Eds.)
-
The Operon, Cold Spring Harbor Laboratory 1980, Cold Spring Harbor, New York. J.H. Miller, W.S. Reznikoff (Eds.).
-
(1980)
The Operon, Cold Spring Harbor Laboratory
-
-
-
5
-
-
0016154164
-
Genetic regulatory mechanisms and the ecological niche of Escherichia coli
-
Savageau M.A. Genetic regulatory mechanisms and the ecological niche of Escherichia coli. Proc. Natl. Acad. Sci. USA 1974, 71:2453.
-
(1974)
Proc. Natl. Acad. Sci. USA
, vol.71
, pp. 2453
-
-
Savageau, M.A.1
-
6
-
-
0002539674
-
Are there rules governing patterns of gene regulation?
-
Edinburgh University, Edinburgh, B.C. Goodwin, P.T. Saunders (Eds.)
-
Savageau M.A. Are there rules governing patterns of gene regulation?. Theoretical Biology - Epigenetic and Evolutionary Order 1989, 42. Edinburgh University, Edinburgh. B.C. Goodwin, P.T. Saunders (Eds.).
-
(1989)
Theoretical Biology - Epigenetic and Evolutionary Order
, pp. 42
-
-
Savageau, M.A.1
-
7
-
-
33645222401
-
Rules for biological regulation based on error minimization
-
Shinar G., Dekel E., Tlusty T., Alon U. Rules for biological regulation based on error minimization. Proc. Natl. Acad. Sci. USA 2006, 103:3999.
-
(2006)
Proc. Natl. Acad. Sci. USA
, vol.103
, pp. 3999
-
-
Shinar, G.1
Dekel, E.2
Tlusty, T.3
Alon, U.4
-
8
-
-
0029033413
-
Subunit structure of regulator proteins influences the design of gene circuitry: analysis of perfectly coupled and completely uncoupled circuits
-
Hlavacek W.S., Savageau M.A. Subunit structure of regulator proteins influences the design of gene circuitry: analysis of perfectly coupled and completely uncoupled circuits. J. Mol. Biol. 1995, 248:739.
-
(1995)
J. Mol. Biol.
, vol.248
, pp. 739
-
-
Hlavacek, W.S.1
Savageau, M.A.2
-
9
-
-
0030002954
-
Rules for coupled expression of regulator and effector genes in inducible circuits
-
Hlavacek W.S., Savageau M.A. Rules for coupled expression of regulator and effector genes in inducible circuits. J. Mol. Biol. 1996, 255:121.
-
(1996)
J. Mol. Biol.
, vol.255
, pp. 121
-
-
Hlavacek, W.S.1
Savageau, M.A.2
-
11
-
-
0001389945
-
Enzyme induction as an all-or-none phenomenon
-
Novick A., Weiner M. Enzyme induction as an all-or-none phenomenon. Proc. Natl. Acad. Sci. USA 1957, 43:553.
-
(1957)
Proc. Natl. Acad. Sci. USA
, vol.43
, pp. 553
-
-
Novick, A.1
Weiner, M.2
-
12
-
-
0014318637
-
Mathematics of cellular control processes II: Positive feedback to one gene
-
Griffith J.S. Mathematics of cellular control processes II: Positive feedback to one gene. J. Theor. Biol. 1968, 20:209.
-
(1968)
J. Theor. Biol.
, vol.20
, pp. 209
-
-
Griffith, J.S.1
-
13
-
-
0010258984
-
Chemical instabilities of 'all-or-none' type in β-galactosidase induction and active transport
-
Babloyantz A., Sanglier M. Chemical instabilities of 'all-or-none' type in β-galactosidase induction and active transport. FEBS Lett. 1972, 23:364.
-
(1972)
FEBS Lett.
, vol.23
, pp. 364
-
-
Babloyantz, A.1
Sanglier, M.2
-
14
-
-
0017280151
-
Sustained oscillations and threshold phenomena in an operon control circuit
-
Sanglier M., Nicolis G. Sustained oscillations and threshold phenomena in an operon control circuit. Biophys. Chem. 1976, 4:113.
-
(1976)
Biophys. Chem.
, vol.4
, pp. 113
-
-
Sanglier, M.1
Nicolis, G.2
-
15
-
-
0015527295
-
Lac Repressor-operator interaction. VI. The natural inducer of the lac operon
-
Jobe A., Bourgeois S. lac Repressor-operator interaction. VI. The natural inducer of the lac operon. J. Mol. Biol. 1972, 69:397.
-
(1972)
J. Mol. Biol.
, vol.69
, pp. 397
-
-
Jobe, A.1
Bourgeois, S.2
-
16
-
-
84857640018
-
-
Biochemical Systems Analysis: A Study of Function and Design in Molecular Biology, 40th Anniversary Edition. (a reprinting of the original edition published by Addison-Wesley, Reading, Mass., 1976).
-
M.A. Savageau, Biochemical Systems Analysis: A Study of Function and Design in Molecular Biology, 40th Anniversary Edition, 2009. (a reprinting of the original edition published by Addison-Wesley, Reading, Mass., 1976). http://www.amazon.com/Biochemical-Systems-Analysis-Function-Molecular/dp/1449590764/.
-
(2009)
-
-
Savageau, M.A.1
-
17
-
-
0033020417
-
Design of gene circuitry by natural selection: analysis of the lactose catabolic system in E. coli
-
Savageau M.A. Design of gene circuitry by natural selection: analysis of the lactose catabolic system in E. coli. Biochem. Soc. Trans. 1999, 27:264.
-
(1999)
Biochem. Soc. Trans.
, vol.27
, pp. 264
-
-
Savageau, M.A.1
-
18
-
-
0036846553
-
Alternative designs for a genetic switch: analysis of switching times using the piece-wise power-law representation
-
Savageau M.A. Alternative designs for a genetic switch: analysis of switching times using the piece-wise power-law representation. Math. Biosci. 2002, 180:237.
-
(2002)
Math. Biosci.
, vol.180
, pp. 237
-
-
Savageau, M.A.1
-
19
-
-
33845626641
-
How phosphotransferase system-related protein phosphorylation regulates carbohydrate metabolism in bacteria
-
Deutscher J., Franke C., Postma P.W. How phosphotransferase system-related protein phosphorylation regulates carbohydrate metabolism in bacteria. Microbiol. Mol. Biol. Rev. 2006, 70:939.
-
(2006)
Microbiol. Mol. Biol. Rev.
, vol.70
, pp. 939
-
-
Deutscher, J.1
Franke, C.2
Postma, P.W.3
-
20
-
-
33646570920
-
In vitro reconstitution of catabolite repression in Escherichia coli
-
Park Y.-H., Lee R.R., Seok Y.-J., Peterkofsky A. In vitro reconstitution of catabolite repression in Escherichia coli. J. Biol. Chem. 2006, 281:6448.
-
(2006)
J. Biol. Chem.
, vol.281
, pp. 6448
-
-
Park, Y.-H.1
Lee, R.R.2
Seok, Y.-J.3
Peterkofsky, A.4
-
21
-
-
0017170906
-
A quantitation of the factors which affect the hydrolase and transgalactosylase activities of β-galactosidase (E. coli) on lactose
-
Huber R.E., Kurz G., Wallenfels K. A quantitation of the factors which affect the hydrolase and transgalactosylase activities of β-galactosidase (E. coli) on lactose. Biochemistry 1976, 15:1994.
-
(1976)
Biochemistry
, vol.15
, pp. 1994
-
-
Huber, R.E.1
Kurz, G.2
Wallenfels, K.3
-
22
-
-
0021255365
-
Escherichia coli growth on lactose requires cycling of β-galactosidase products into the medium
-
Huber R.E., Hurlburt K.L. Escherichia coli growth on lactose requires cycling of β-galactosidase products into the medium. Can. J. Microbiol. 1984, 30:411.
-
(1984)
Can. J. Microbiol.
, vol.30
, pp. 411
-
-
Huber, R.E.1
Hurlburt, K.L.2
-
23
-
-
0033060579
-
The identification of a new family of sugar efflux pumps in Escherichia coli
-
Liu J.Y., Miller P.F., Gosink M., Olson E.R. The identification of a new family of sugar efflux pumps in Escherichia coli. Mol. Microbiol. 1999, 31:1845.
-
(1999)
Mol. Microbiol.
, vol.31
, pp. 1845
-
-
Liu, J.Y.1
Miller, P.F.2
Gosink, M.3
Olson, E.R.4
-
24
-
-
0040436094
-
Functional and biochemical characterization of Escherichia coli sugar efflux transporters
-
Liu J.Y., Miller P.F., Willard J., Olson E.R. Functional and biochemical characterization of Escherichia coli sugar efflux transporters. J. Biol. Chem. 1999, 274:22977.
-
(1999)
J. Biol. Chem.
, vol.274
, pp. 22977
-
-
Liu, J.Y.1
Miller, P.F.2
Willard, J.3
Olson, E.R.4
-
25
-
-
0030152980
-
On physiological multiplicity and population heterogeneity of biological systems
-
Chung J.D., Stephanopoulos G. On physiological multiplicity and population heterogeneity of biological systems. Chem. Eng. Sci. 1996, 51:1509.
-
(1996)
Chem. Eng. Sci.
, vol.51
, pp. 1509
-
-
Chung, J.D.1
Stephanopoulos, G.2
-
26
-
-
43349105748
-
Bistability of the lac operon during growth of Escherichia coli on lactose and lactose+glucose
-
Narang A., Pilyugin S.S. Bistability of the lac operon during growth of Escherichia coli on lactose and lactose+glucose. Bull. Math. Biol. 2008, 70:1032.
-
(2008)
Bull. Math. Biol.
, vol.70
, pp. 1032
-
-
Narang, A.1
Pilyugin, S.S.2
-
27
-
-
0025343547
-
The three operators of the lac operon cooperate in repression
-
Oehler S., Eismann E.R., Krämer JH., Müller-Hill B. The three operators of the lac operon cooperate in repression. EMBO J. 1990, 9:973.
-
(1990)
EMBO J.
, vol.9
, pp. 973
-
-
Oehler, S.1
Eismann, E.R.2
Krämer, J.H.3
Müller-Hill, B.4
-
28
-
-
32644439362
-
Induction of the lac promoter in the absence of DNA loops and the stoichiometry of induction
-
Oehler S., Alberti S., Müller-Hill B. Induction of the lac promoter in the absence of DNA loops and the stoichiometry of induction. Nucleic Acids Res. 2006, 34:606.
-
(2006)
Nucleic Acids Res.
, vol.34
, pp. 606
-
-
Oehler, S.1
Alberti, S.2
Müller-Hill, B.3
-
29
-
-
33749517682
-
In silico evolved lac operons exhibit bistability for artificial inducers, but not for lactose
-
van Hoek M.J.A., Hogeweg P. In silico evolved lac operons exhibit bistability for artificial inducers, but not for lactose. Biophys. J. 2006, 91:2833.
-
(2006)
Biophys. J.
, vol.91
, pp. 2833
-
-
van Hoek, M.J.A.1
Hogeweg, P.2
-
30
-
-
44049109241
-
Bistable behavior in a model of the lac operon in Escherichia coli with variable growth rate
-
Santillán M. Bistable behavior in a model of the lac operon in Escherichia coli with variable growth rate. Biophys. J. 2008, 94:2065.
-
(2008)
Biophys. J.
, vol.94
, pp. 2065
-
-
Santillán, M.1
-
31
-
-
66149108427
-
Phenotypes and tolerances in the design space of biochemical systems
-
Savageau M.A., Coelho P.M.B.M., Fasani R., Tolla D., Salvador A. Phenotypes and tolerances in the design space of biochemical systems. Proc. Natl. Acad. Sci. USA 2009, 106:6435.
-
(2009)
Proc. Natl. Acad. Sci. USA
, vol.106
, pp. 6435
-
-
Savageau, M.A.1
Coelho, P.M.B.M.2
Fasani, R.3
Tolla, D.4
Salvador, A.5
-
32
-
-
63549119474
-
Global tolerance of biochemical systems and the design of moiety-transfer cycles
-
Coelho P.M.B.M., Salvador A., Savageau M.A. Global tolerance of biochemical systems and the design of moiety-transfer cycles. PLOS Comput. Biol. 2009, 5(3):e1000319.
-
(2009)
PLOS Comput. Biol.
, vol.5
, Issue.3
-
-
Coelho, P.M.B.M.1
Salvador, A.2
Savageau, M.A.3
-
33
-
-
71149094663
-
Qualitatively distinct phenotypes in the design space of biochemical systems
-
Savageau M.A., Fasani R.A. Qualitatively distinct phenotypes in the design space of biochemical systems. FEBS Lett. 2009, 583:3914.
-
(2009)
FEBS Lett.
, vol.583
, pp. 3914
-
-
Savageau, M.A.1
Fasani, R.A.2
-
34
-
-
77955876041
-
Duplication frequency in a population of Salmonella enterica rapidly approaches steady state with or without recombination
-
Reams A.B., Kofoid E., Savageau M.A., Roth J.R. Duplication frequency in a population of Salmonella enterica rapidly approaches steady state with or without recombination. Genetics 2010, 184:1077.
-
(2010)
Genetics
, vol.184
, pp. 1077
-
-
Reams, A.B.1
Kofoid, E.2
Savageau, M.A.3
Roth, J.R.4
-
35
-
-
78650248379
-
Phenotypic repertoire of the FNR regulatory network in Escherichia coli
-
Tolla D.A., Savageau M.A. Phenotypic repertoire of the FNR regulatory network in Escherichia coli. Mol. Microbiol. 2011, 79:149.
-
(2011)
Mol. Microbiol.
, vol.79
, pp. 149
-
-
Tolla, D.A.1
Savageau, M.A.2
-
36
-
-
77957765858
-
Automatic construction and analysis of the design space of biochemical systems
-
Fasani R.A., Savageau M.A. Automatic construction and analysis of the design space of biochemical systems. Bioinformatics 2010, 26:2601.
-
(2010)
Bioinformatics
, vol.26
, pp. 2601
-
-
Fasani, R.A.1
Savageau, M.A.2
-
37
-
-
0031105797
-
Mathematical model of the lac operon: inducer exclusion; catabolite repression and diauxic growth on glucose and lactose
-
Wong P., Gladney S., Keasling J.D. Mathematical model of the lac operon: inducer exclusion; catabolite repression and diauxic growth on glucose and lactose. Biotechnol. Prog. 1997, 13:132.
-
(1997)
Biotechnol. Prog.
, vol.13
, pp. 132
-
-
Wong, P.1
Gladney, S.2
Keasling, J.D.3
-
40
-
-
54049156116
-
Determinants of bistability in induction of the Escherichia coli lac operon
-
Dreisigmeyer D.W., Stajic J., Nemenman I., Hlavacek W.S., Wall M.E. Determinants of bistability in induction of the Escherichia coli lac operon. IET Systems Biology 2008, 2:293.
-
(2008)
IET Systems Biology
, vol.2
, pp. 293
-
-
Dreisigmeyer, D.W.1
Stajic, J.2
Nemenman, I.3
Hlavacek, W.S.4
Wall, M.E.5
-
41
-
-
1442354192
-
Multistability in the lactose utilization network of Escherichia coli
-
Ozbudak E.M., Thattai M., Lim H.N., Shraiman B.I., Oudenaarden A van Multistability in the lactose utilization network of Escherichia coli. Nature 2004, 427:737.
-
(2004)
Nature
, vol.427
, pp. 737
-
-
Ozbudak, E.M.1
Thattai, M.2
Lim, H.N.3
Shraiman, B.I.4
Oudenaarden, A.V.5
-
42
-
-
77955102352
-
Quantifying E. coli proteome and transcriptome with single-molecule sensitivity in single cells
-
Taniguchi Y., Choi P.J., Li G.-W., Chen H., Babu M., Hearn J., Emili A., Xie X.S. Quantifying E. coli proteome and transcriptome with single-molecule sensitivity in single cells. Science 2010, 329:533.
-
(2010)
Science
, vol.329
, pp. 533
-
-
Taniguchi, Y.1
Choi, P.J.2
Li, G.-W.3
Chen, H.4
Babu, M.5
Hearn, J.6
Emili, A.7
Xie, X.S.8
-
43
-
-
0035578429
-
Design principles for elementary gene circuits: elements, methods, and examples
-
Savageau M.A. Design principles for elementary gene circuits: elements, methods, and examples. Chaos 2001, 11:142.
-
(2001)
Chaos
, vol.11
, pp. 142
-
-
Savageau, M.A.1
-
45
-
-
42049092081
-
The mechanisms of carbon catabolite repression in bacteria
-
Deutscher J. The mechanisms of carbon catabolite repression in bacteria. Curr. Opin. Microbiol. 2008, 11:87.
-
(2008)
Curr. Opin. Microbiol.
, vol.11
, pp. 87
-
-
Deutscher, J.1
-
46
-
-
0036217950
-
Regulation of gene expression in the PTS in Escherichia coli: the role and interactions of Mlc
-
Plumbridge J. Regulation of gene expression in the PTS in Escherichia coli: the role and interactions of Mlc. Curr. Opin. Microbiol. 2003, 5:187.
-
(2003)
Curr. Opin. Microbiol.
, vol.5
, pp. 187
-
-
Plumbridge, J.1
-
47
-
-
0002790076
-
The properties of repressor and the kinetics of its action
-
Sadler J.R., Novick A. The properties of repressor and the kinetics of its action. J. Mol. Biol. 1965, 12:305.
-
(1965)
J. Mol. Biol.
, vol.12
, pp. 305
-
-
Sadler, J.R.1
Novick, A.2
-
48
-
-
0016419101
-
Quantitative aspects of protein induction
-
Yagil G. Quantitative aspects of protein induction. Curr. Top. Cell Regul. 1975, 9:183.
-
(1975)
Curr. Top. Cell Regul.
, vol.9
, pp. 183
-
-
Yagil, G.1
-
49
-
-
77958545833
-
Relating genotype to phenotype via the quantitative behavior of the NADPH redox cycle in human erythrocytes: mutant analysis
-
Coelho P.M.B.M., Salvador A., Savageau M.A. Relating genotype to phenotype via the quantitative behavior of the NADPH redox cycle in human erythrocytes: mutant analysis. PLOS One 2010, 5(9):e13031.
-
(2010)
PLOS One
, vol.5
, Issue.9
-
-
Coelho, P.M.B.M.1
Salvador, A.2
Savageau, M.A.3
-
50
-
-
79954419210
-
System design space with applications to biomedical engineering
-
Savageau M.A. System design space with applications to biomedical engineering. Annal Biomed. Engr. 2011, 39:1278.
-
(2011)
Annal Biomed. Engr.
, vol.39
, pp. 1278
-
-
Savageau, M.A.1
-
52
-
-
0020891851
-
Escherichia coli habitats, cell types, and molecular mechanisms of gene control
-
Savageau M.A. Escherichia coli habitats, cell types, and molecular mechanisms of gene control. Am. Naturalist 1983, 122:732.
-
(1983)
Am. Naturalist
, vol.122
, pp. 732
-
-
Savageau, M.A.1
-
53
-
-
0002673826
-
A critique of the enzymologist's test tube
-
JAI Press Inc., Greenwich, Connecticut, A
-
Savageau M.A. A critique of the enzymologist's test tube. Fundamentals of Medical Cell Biology 1992, vol. 3A:45. JAI Press Inc., Greenwich, Connecticut.
-
(1992)
Fundamentals of Medical Cell Biology
, vol.3
, pp. 45
-
-
Savageau, M.A.1
-
54
-
-
0001680570
-
Use of high temperature catalytic oxidation (HTCO) to measure carbon content of microorganisms
-
Pelegri{dotless}́ S.P., Dolan J., Rassoulzadegan F. Use of high temperature catalytic oxidation (HTCO) to measure carbon content of microorganisms. Aquat. Microbiol. Ecol. 1999, 16:273.
-
(1999)
Aquat. Microbiol. Ecol.
, vol.16
, pp. 273
-
-
Pelegrí, S.P.1
Dolan, J.2
Rassoulzadegan, F.3
-
55
-
-
79954592937
-
-
Network Analysis and Feedback Amplifier Design, Van Nostran, Princeton, New Jersey,
-
H.W. Bode, Network Analysis and Feedback Amplifier Design, Van Nostran, Princeton, New Jersey, 1945.
-
(1945)
-
-
Bode, H.W.1
|