-
1
-
-
0035016343
-
Phylogenetic characterization of genotype 4 hepatitis C virus isolates from Argentina
-
Alfonso V, Flichman D, Sookoian S, Mbayed VA, Campos RH. 2001. Phylogenetic characterization of genotype 4 hepatitis C virus isolates from Argentina. J Clin Microbiol 39:1989-1992.
-
(2001)
J Clin Microbiol
, vol.39
, pp. 1989-1992
-
-
Alfonso, V.1
Flichman, D.2
Sookoian, S.3
Mbayed, V.A.4
Campos, R.H.5
-
2
-
-
58149171775
-
Hepatitis C virus genotypes distribution and viral load level among HIV-coinfected patients
-
Bolcic F, Laufer N, Quarleri J. 2008. Hepatitis C virus genotypes distribution and viral load level among HIV-coinfected patients. Acta Gastroenterol Latinoam 38:307.
-
(2008)
Acta Gastroenterol Latinoam
, vol.38
, pp. 307
-
-
Bolcic, F.1
Laufer, N.2
Quarleri, J.3
-
3
-
-
77950648470
-
An overview about hepatitis C: A devastating virus
-
Bostan N, Mahmood T. 2010. An overview about hepatitis C: A devastating virus. Crit Rev Microbiol 36:91-133.
-
(2010)
Crit Rev Microbiol
, vol.36
, pp. 91-133
-
-
Bostan, N.1
Mahmood, T.2
-
4
-
-
0025968921
-
Genetic organization and diversity of the hepatitis C virus
-
Choo QL, Richman KH, Han JH, Berger K, Lee C, Dong C, Gallegos C, Coit D, Medina-Selby R, Barr PJ, Weiner AJ, Bradley DW, Kuo D, Houghton M. 1991. Genetic organization and diversity of the hepatitis C virus. Proc Natl Acad Sci USA 88:2451-2455.
-
(1991)
Proc Natl Acad Sci USA
, vol.88
, pp. 2451-2455
-
-
Choo, Q.L.1
Richman, K.H.2
Han, J.H.3
Berger, K.4
Lee, C.5
Dong, C.6
Gallegos, C.7
Coit, D.8
Medina-Selby, R.9
Barr, P.J.10
Weiner, A.J.11
Bradley, D.W.12
Kuo, D.13
Houghton, M.14
-
5
-
-
33846092912
-
euHCVdb: The European hepatitis C virus database
-
Combet C, Garnier N, Charavay C, Grando D, Crisan D, Lopez J, Dehne-Garcia A, Geourjon C, Bettler E, Hulo C, Le Mercier P, Bartenschlager R, Diepolder H, Moradpour D, Pawlotsky JM, Rice CM, Trepo C, Penin F, Deleage G. 2007. euHCVdb: The European hepatitis C virus database. Nucleic Acids Res 35:D363-D366.
-
(2007)
Nucleic Acids Res
, vol.35
-
-
Combet, C.1
Garnier, N.2
Charavay, C.3
Grando, D.4
Crisan, D.5
Lopez, J.6
Dehne-Garcia, A.7
Geourjon, C.8
Bettler, E.9
Hulo, C.10
Le Mercier, P.11
Bartenschlager, R.12
Diepolder, H.13
Moradpour, D.14
Pawlotsky, J.M.15
Rice, C.M.16
Trepo, C.17
Penin, F.18
Deleage, G.19
-
6
-
-
71549168619
-
Emergence of hepatitis C virus genotype 4: Phylogenetic analysis reveals three distinct epidemiological profiles
-
de Bruijne J, Schinkel J, Prins M, Koekkoek SM, Aronson SJ, van Ballegooijen MW, Reesink HW, Molenkamp R, van de Laar TJ. 2009. Emergence of hepatitis C virus genotype 4: Phylogenetic analysis reveals three distinct epidemiological profiles. J Clin Microbiol 47:3832-3838.
-
(2009)
J Clin Microbiol
, vol.47
, pp. 3832-3838
-
-
de Bruijne, J.1
Schinkel, J.2
Prins, M.3
Koekkoek, S.M.4
Aronson, S.J.5
van Ballegooijen, M.W.6
Reesink, H.W.7
Molenkamp, R.8
van de Laar, T.J.9
-
7
-
-
54949102004
-
HLA-driven convergence of HIV-1 viral subtypes B and F toward the adaptation to immune responses in human populations
-
Dilernia DA, Jones L, Rodriguez S, Turk G, Rubio AE, Pampuro S, Gomez-Carrillo M, Bautista CT, Deluchi G, Benetucci J, Lasala MB, Lourtau L, Losso MH, Perez H, Cahn P, Salomon H. 2008. HLA-driven convergence of HIV-1 viral subtypes B and F toward the adaptation to immune responses in human populations. PLoS ONE 3:e3429.
-
(2008)
PLoS ONE
, vol.3
-
-
Dilernia, D.A.1
Jones, L.2
Rodriguez, S.3
Turk, G.4
Rubio, A.E.5
Pampuro, S.6
Gomez-Carrillo, M.7
Bautista, C.T.8
Deluchi, G.9
Benetucci, J.10
Lasala, M.B.11
Lourtau, L.12
Losso, M.H.13
Perez, H.14
Cahn, P.15
Salomon, H.16
-
8
-
-
79952118106
-
Molecular and epidemiological profiles of hepatitis C virus genotype 4 in Denmark
-
Eriksen MB, Jorgensen LB, Krarup H, Laursen AL, Christensen PB, Moller A, Schlichting P, Kuiken C, Bukh J, Weis N. 2010. Molecular and epidemiological profiles of hepatitis C virus genotype 4 in Denmark. J Med Virol 82:1869-1877.
-
(2010)
J Med Virol
, vol.82
, pp. 1869-1877
-
-
Eriksen, M.B.1
Jorgensen, L.B.2
Krarup, H.3
Laursen, A.L.4
Christensen, P.B.5
Moller, A.6
Schlichting, P.7
Kuiken, C.8
Bukh, J.9
Weis, N.10
-
9
-
-
23144442051
-
A review of: "TNT, Tree Analysis Using New Technologies
-
Giribet CG. 2005. A review of: "TNT, Tree Analysis Using New Technologies". Syst Biol 54:176-178.
-
(2005)
Syst Biol
, vol.54
, pp. 176-178
-
-
Giribet, C.G.1
-
10
-
-
45749124657
-
TNT, a free program for phylogenetic analysis
-
Goloboff PA, Farris JS, Nixon KC. 2008. TNT, a free program for phylogenetic analysis. Cladistics 24:774-786.
-
(2008)
Cladistics
, vol.24
, pp. 774-786
-
-
Goloboff, P.A.1
Farris, J.S.2
Nixon, K.C.3
-
11
-
-
0242578620
-
A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood
-
Guindon S, Gascuel O. 2003. A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood. Syst Biol 52:696-704.
-
(2003)
Syst Biol
, vol.52
, pp. 696-704
-
-
Guindon, S.1
Gascuel, O.2
-
12
-
-
0034849408
-
MRBAYES: Bayesian inference of phylogenetic trees
-
Huelsenbeck JP, Ronquist F. 2001. MRBAYES: Bayesian inference of phylogenetic trees. Bioinformatics 17:754-755.
-
(2001)
Bioinformatics
, vol.17
, pp. 754-755
-
-
Huelsenbeck, J.P.1
Ronquist, F.2
-
13
-
-
42249110672
-
Hepatitis C genotype 4: What we know and what we don't yet know
-
Kamal SM, Nasser IA. 2008. Hepatitis C genotype 4: What we know and what we don't yet know. Hepatology 47:1371-1383.
-
(2008)
Hepatology
, vol.47
, pp. 1371-1383
-
-
Kamal, S.M.1
Nasser, I.A.2
-
14
-
-
0037100671
-
MAFFT: A novel method for rapid multiple sequence alignment based on fast Fourier transform
-
Katoh K, Misawa K, Kuma K, Miyata T. 2002. MAFFT: A novel method for rapid multiple sequence alignment based on fast Fourier transform. Nucleic Acids Res 30:3059-3066.
-
(2002)
Nucleic Acids Res
, vol.30
, pp. 3059-3066
-
-
Katoh, K.1
Misawa, K.2
Kuma, K.3
Miyata, T.4
-
15
-
-
68049142320
-
Multiple alignment of DNA sequences with MAFFT
-
Katoh K, Asimenos G, Toh H. 2009. Multiple alignment of DNA sequences with MAFFT. Methods Mol Biol 537:39-64.
-
(2009)
Methods Mol Biol
, vol.537
, pp. 39-64
-
-
Katoh, K.1
Asimenos, G.2
Toh, H.3
-
16
-
-
61549118827
-
Nomenclature and numbering of the hepatitis C virus
-
Kuiken C, Simmonds P. 2009. Nomenclature and numbering of the hepatitis C virus. Methods Mol Biol 510:33-53.
-
(2009)
Methods Mol Biol
, vol.510
, pp. 33-53
-
-
Kuiken, C.1
Simmonds, P.2
-
18
-
-
20844441405
-
Comparison of hepatitis C virus NS5b and 5' noncoding gene sequencing methods in a multicenter study
-
Laperche S, Lunel F, Izopet J, Alain S, Deny P, Duverlie G, Gaudy C, Pawlotsky JM, Plantier JC, Pozzetto B, Thibault V, Tosetti F, Lefrere JJ. 2005. Comparison of hepatitis C virus NS5b and 5' noncoding gene sequencing methods in a multicenter study. J Clin Microbiol 43:733-739.
-
(2005)
J Clin Microbiol
, vol.43
, pp. 733-739
-
-
Laperche, S.1
Lunel, F.2
Izopet, J.3
Alain, S.4
Deny, P.5
Duverlie, G.6
Gaudy, C.7
Pawlotsky, J.M.8
Plantier, J.C.9
Pozzetto, B.10
Thibault, V.11
Tosetti, F.12
Lefrere, J.J.13
-
19
-
-
69449107079
-
Complete genomic sequences for hepatitis C virus subtypes 4b, 4c, 4d, 4g, 4k, 4l, 4m, 4n, 4o, 4p, 4q, 4r, and 4t
-
Li C, Lu L, Wu X, Wang C, Bennett P, Lu T, Murphy D. 2009. Complete genomic sequences for hepatitis C virus subtypes 4b, 4c, 4d, 4g, 4k, 4l, 4m, 4n, 4o, 4p, 4q, 4r, and 4t. J Gen Virol 90:1820-1826.
-
(2009)
J Gen Virol
, vol.90
, pp. 1820-1826
-
-
Li, C.1
Lu, L.2
Wu, X.3
Wang, C.4
Bennett, P.5
Lu, T.6
Murphy, D.7
-
20
-
-
70350012290
-
Viral factors influencing the response to the combination therapy of peginterferon plus ribavirin in chronic hepatitis C
-
Maekawa S, Enomoto N. 2009. Viral factors influencing the response to the combination therapy of peginterferon plus ribavirin in chronic hepatitis C. J Gastroenterol 44:1009-1015.
-
(2009)
J Gastroenterol
, vol.44
, pp. 1009-1015
-
-
Maekawa, S.1
Enomoto, N.2
-
22
-
-
17144462542
-
Hepatitis C (HCV) genotype and viral titer distribution among Argentinean hemophilic patients in the presence or absence of human immunodeficiency virus (HIV) co-infection
-
Picchio GR, Nakatsuno M, Boggiano C, Sabbe R, Corti M, Daruich J, Perez-Bianco R, Tezanos-Pinto M, Kokka R, Wilber J, Mosier D. 1997. Hepatitis C (HCV) genotype and viral titer distribution among Argentinean hemophilic patients in the presence or absence of human immunodeficiency virus (HIV) co-infection. J Med Virol 52:219-225.
-
(1997)
J Med Virol
, vol.52
, pp. 219-225
-
-
Picchio, G.R.1
Nakatsuno, M.2
Boggiano, C.3
Sabbe, R.4
Corti, M.5
Daruich, J.6
Perez-Bianco, R.7
Tezanos-Pinto, M.8
Kokka, R.9
Wilber, J.10
Mosier, D.11
-
23
-
-
0034459557
-
Genomic and phylogenetic analysis of hepatitis C virus isolates from argentine patients: A six-year retrospective study
-
Quarleri JF, Robertson BH, Mathet VL, Feld M, Espinola L, Requeijo MP, Mando O, Carballal G, Oubina JR. 2000. Genomic and phylogenetic analysis of hepatitis C virus isolates from argentine patients: A six-year retrospective study. J Clin Microbiol 38:4560-4568.
-
(2000)
J Clin Microbiol
, vol.38
, pp. 4560-4568
-
-
Quarleri, J.F.1
Robertson, B.H.2
Mathet, V.L.3
Feld, M.4
Espinola, L.5
Requeijo, M.P.6
Mando, O.7
Carballal, G.8
Oubina, J.R.9
-
24
-
-
34447262343
-
HCV genotype distribution among HIV co-infected individuals in Argentina: Relationship with host and viral factors
-
Quarleri JF, Bolcic FM, Bouzas MB, Laufer N, Gomez Carrillo M, Mammana L, Kaufman S, Perez H, Cahn P, Salomon H. 2007. HCV genotype distribution among HIV co-infected individuals in Argentina: Relationship with host and viral factors. Acta Gastroenterol Latinoam 37:76-83.
-
(2007)
Acta Gastroenterol Latinoam
, vol.37
, pp. 76-83
-
-
Quarleri, J.F.1
Bolcic, F.M.2
Bouzas, M.B.3
Laufer, N.4
Gomez Carrillo, M.5
Mammana, L.6
Kaufman, S.7
Perez, H.8
Cahn, P.9
Salomon, H.10
-
25
-
-
0034001484
-
Correlation of genotypes and route of transmission with histologic activity and disease stage in chronic hepatitis C
-
Ramalho F, Costa A, Pires A, Cabrita P, Serejo F, Correia AP, Fatela N, Cloria H, Lopes J, Pinto HC, Marinho R, Raimundo M, Velosa J, Batista A, de Moura MC. 2000. Correlation of genotypes and route of transmission with histologic activity and disease stage in chronic hepatitis C. Dig Dis Sci 45:182-187.
-
(2000)
Dig Dis Sci
, vol.45
, pp. 182-187
-
-
Ramalho, F.1
Costa, A.2
Pires, A.3
Cabrita, P.4
Serejo, F.5
Correia, A.P.6
Fatela, N.7
Cloria, H.8
Lopes, J.9
Pinto, H.C.10
Marinho, R.11
Raimundo, M.12
Velosa, J.13
Batista, A.14
de Moura, M.C.15
-
26
-
-
0343376130
-
Unexpected high prevalence of hepatitis C virus genotype 4 in Southern Spain
-
Sanchez-Quijano A, Abad MA, Torronteras R, Rey C, Pineda JA, Leal M, Macias J, Lissen E. 1997. Unexpected high prevalence of hepatitis C virus genotype 4 in Southern Spain. J Hepatol 27:25-29.
-
(1997)
J Hepatol
, vol.27
, pp. 25-29
-
-
Sanchez-Quijano, A.1
Abad, M.A.2
Torronteras, R.3
Rey, C.4
Pineda, J.A.5
Leal, M.6
Macias, J.7
Lissen, E.8
-
27
-
-
25844523297
-
Consensus proposals for a unified system of nomenclature of hepatitis C virus genotypes
-
Simmonds P, Bukh J, Combet C, Deleage G, Enomoto N, Feinstone S, Halfon P, Inchauspe G, Kuiken C, Maertens G, Mizokami M, Murphy DG, Okamoto H, Pawlotsky JM, Penin F, Sablon E, Shin IT, Stuyver LJ, Thiel HJ, Viazov S, Weiner AJ, Widell A. 2005. Consensus proposals for a unified system of nomenclature of hepatitis C virus genotypes. Hepatology 42:962-973.
-
(2005)
Hepatology
, vol.42
, pp. 962-973
-
-
Simmonds, P.1
Bukh, J.2
Combet, C.3
Deleage, G.4
Enomoto, N.5
Feinstone, S.6
Halfon, P.7
Inchauspe, G.8
Kuiken, C.9
Maertens, G.10
Mizokami, M.11
Murphy, D.G.12
Okamoto, H.13
Pawlotsky, J.M.14
Penin, F.15
Sablon, E.16
Shin, I.T.17
Stuyver, L.J.18
Thiel, H.J.19
Viazov, S.20
Weiner, A.J.21
Widell, A.22
more..
-
28
-
-
0031017973
-
The origin of hepatitis C virus genotypes
-
Smith DB, Pathirana S, Davidson F, Lawlor E, Power J, Yap PL, Simmonds P. 1997. The origin of hepatitis C virus genotypes. J Gen Virol 78:321-328.
-
(1997)
J Gen Virol
, vol.78
, pp. 321-328
-
-
Smith, D.B.1
Pathirana, S.2
Davidson, F.3
Lawlor, E.4
Power, J.5
Yap, P.L.6
Simmonds, P.7
-
29
-
-
79954574951
-
-
1997. SISA-Binomial.
-
Uitenbroek DG. 1997. SISA-Binomial.
-
-
-
Uitenbroek, D.G.1
-
30
-
-
65249116434
-
Evidence of a large, international network of HCV transmission in HIV-positive men who have sex with men
-
van de Laar T, Pybus O, Bruisten S, Brown D, Nelson M, Bhagani S, Vogel M, Baumgarten A, Chaix ML, Fisher M, Gotz H, Matthews GV, Neifer S, White P, Rawlinson W, Pol S, Rockstroh J, Coutinho R, Dore GJ, Dusheiko GM, Danta M. 2009. Evidence of a large, international network of HCV transmission in HIV-positive men who have sex with men. Gastroenterology 136:1609-1617.
-
(2009)
Gastroenterology
, vol.136
, pp. 1609-1617
-
-
van de Laar, T.1
Pybus, O.2
Bruisten, S.3
Brown, D.4
Nelson, M.5
Bhagani, S.6
Vogel, M.7
Baumgarten, A.8
Chaix, M.L.9
Fisher, M.10
Gotz, H.11
Matthews, G.V.12
Neifer, S.13
White, P.14
Rawlinson, W.15
Pol, S.16
Rockstroh, J.17
Coutinho, R.18
Dore, G.J.19
Dusheiko, G.M.20
Danta, M.21
more..
-
31
-
-
79951669093
-
Phylogenetic analysis of acute hepatitis C virus genotype 4 infections among human immunodeficiency virus-positive men who have sex with men in Germany
-
Vogel M, van de Laar T, Kupfer B, Stellbrink HJ, Kummerle T, Mauss S, Knecht G, Berger A, Bruisten S, Rockstroh JK. 2010. Phylogenetic analysis of acute hepatitis C virus genotype 4 infections among human immunodeficiency virus-positive men who have sex with men in Germany. Liver Int 30:1169-1172.
-
(2010)
Liver Int
, vol.30
, pp. 1169-1172
-
-
Vogel, M.1
van de Laar, T.2
Kupfer, B.3
Stellbrink, H.J.4
Kummerle, T.5
Mauss, S.6
Knecht, G.7
Berger, A.8
Bruisten, S.9
Rockstroh, J.K.10
|