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Volumn 9, Issue , 2011, Pages

Macroscopic law of conservation revealed in the population dynamics of Toll-like receptor signaling

Author keywords

cell signaling; governing law; immune response; microscopic and macroscopic dynamics; systems biology

Indexed keywords

CYTOKINE; EPIDERMAL GROWTH FACTOR RECEPTOR; I KAPPA B ALPHA; IMMUNOGLOBULIN ENHANCER BINDING PROTEIN; INTERFERON; INTERFERON REGULATORY FACTOR 3; MITOGEN ACTIVATED PROTEIN KINASE; MYELOID DIFFERENTIATION FACTOR 88; RAS PROTEIN; STRESS ACTIVATED PROTEIN KINASE; SYNAPTOPHYSIN; TOLL LIKE RECEPTOR; TOLL LIKE RECEPTOR 3; TOLL LIKE RECEPTOR 4; TOLL LIKE RECEPTOR ADAPTOR MOLECULE 2; TUMOR NECROSIS FACTOR RECEPTOR ASSOCIATED DEATH DOMAIN PROTEIN; TUMOR NECROSIS FACTOR RECEPTOR ASSOCIATED FACTOR 6;

EID: 79954591119     PISSN: None     EISSN: 1478811X     Source Type: Journal    
DOI: 10.1186/1478-811X-9-9     Document Type: Review
Times cited : (21)

References (28)
  • 1
    • 77951260924 scopus 로고    scopus 로고
    • The role of pattern-recognition receptors in innate immunity: Update on Toll-like receptors
    • 10.1038/ni.1863 20404851
    • The role of pattern-recognition receptors in innate immunity: update on Toll-like receptors. T Kawai, S Akira, Nat Immunol 2010 11 373 84 10.1038/ni.1863 20404851
    • (2010) Nat Immunol , vol.11 , pp. 373-384
    • Kawai, T.1    Akira, S.2
  • 2
    • 0037119587 scopus 로고    scopus 로고
    • Stochastic gene expression in a single cell
    • DOI 10.1126/science.1070919
    • Stochastic gene expression in a single cell. MB Elowitz, AJ Levine, ED Siggia, PS Swain, Science 2002 297 1183 1186 10.1126/science.1070919 12183631 (Pubitemid 36193353)
    • (2002) Science , vol.297 , Issue.5584 , pp. 1183-1186
    • Elowitz, M.B.1    Levine, A.J.2    Siggia, E.D.3    Swain, P.S.4
  • 3
    • 77954541844 scopus 로고    scopus 로고
    • Single-cell NF-kappaB dynamics reveal digital activation and analogue information processing
    • 10.1038/nature09145 20581820
    • Single-cell NF-kappaB dynamics reveal digital activation and analogue information processing. S Tay, JJ Hughey, TK Lee, T Lipniacki, SR Quake, MW Covert, Nature 2010 466 267 71 10.1038/nature09145 20581820
    • (2010) Nature , vol.466 , pp. 267-271
    • Tay, S.1    Hughey, J.J.2    Lee, T.K.3    Lipniacki, T.4    Quake, S.R.5    Covert, M.W.6
  • 4
    • 44349162752 scopus 로고    scopus 로고
    • Transcriptome-wide noise controls lineage choice in mammalian progenitor cells
    • DOI 10.1038/nature06965, PII NATURE06965
    • Transcriptome-wide noise controls lineage choice in mammalian progenitor cells. HH Chang, M Hemberg, M Barahona, DE Ingber, S Huang, Nature 2008 453 544 547 10.1038/nature06965 18497826 (Pubitemid 351733323)
    • (2008) Nature , vol.453 , Issue.7194 , pp. 544-547
    • Chang, H.H.1    Hemberg, M.2    Barahona, M.3    Ingber, D.E.4    Huang, S.5
  • 5
    • 33745287724 scopus 로고    scopus 로고
    • Noise in protein expression scales with natural protein abundance
    • DOI 10.1038/ng1807, PII N1807
    • Noise in protein expression scales with natural protein abundance. A Bar-Even, J Paulsson, N Maheshri, M Carmi, E O'Shea, Y Pilpel, N Barkai, Nat Genet 2006 38 636 643 10.1038/ng1807 16715097 (Pubitemid 43927304)
    • (2006) Nature Genetics , vol.38 , Issue.6 , pp. 636-643
    • Bar-Even, A.1    Paulsson, J.2    Maheshri, N.3    Carmi, M.4    O'Shea, E.5    Pilpel, Y.6    Barkai, N.7
  • 6
    • 67749096272 scopus 로고    scopus 로고
    • Coupled stochastic spatial and non-spatial simulations of ErbB1 signaling pathways demonstrate the importance of spatial organization in signal transduction
    • 10.1371/journal.pone.0006316 19626123
    • Coupled stochastic spatial and non-spatial simulations of ErbB1 signaling pathways demonstrate the importance of spatial organization in signal transduction. MN Costa, K Radhakrishnan, BS Wilson, DG Vlachos, JS Edwards, PLoS One 2009 4 6316 10.1371/journal.pone.0006316 19626123
    • (2009) PLoS One , vol.4 , pp. 56316
    • Costa, M.N.1    Radhakrishnan, K.2    Wilson, B.S.3    Vlachos, D.G.4    Edwards, J.S.5
  • 7
    • 77952903562 scopus 로고    scopus 로고
    • Signalling ballet in space and time
    • 10.1038/nrm2901 20495582
    • Signalling ballet in space and time. BN Kholodenko, JF Hancock, W Kolch, Nat Rev Mol Cell Biol 2010 11 414 426 10.1038/nrm2901 20495582
    • (2010) Nat Rev Mol Cell Biol , vol.11 , pp. 414-426
    • Kholodenko, B.N.1    Hancock, J.F.2    Kolch, W.3
  • 8
    • 77952917698 scopus 로고    scopus 로고
    • Spatial organization of intracellular communication: Insights from imaging
    • 10.1038/nrm2903 20485292
    • Spatial organization of intracellular communication: insights from imaging. L Dehmelt, PIH Bastiaens, Nat Rev Mol Cell Biol 2010 11 440 452 10.1038/nrm2903 20485292
    • (2010) Nat Rev Mol Cell Biol , vol.11 , pp. 440-452
    • Dehmelt, L.1    Bastiaens, P.I.H.2
  • 9
    • 78649876151 scopus 로고    scopus 로고
    • Crowding and hydrodynamic interactions likely dominate in vivo macromolecular motion
    • 10.1073/pnas.1011354107 20937902
    • Crowding and hydrodynamic interactions likely dominate in vivo macromolecular motion. T Ando, J Skolnick, Proc Natl Acad Sci USA 2010 107 18457 462 10.1073/pnas.1011354107 20937902
    • (2010) Proc Natl Acad Sci USA , vol.107 , pp. 18457-18462
    • Ando, T.1    Skolnick, J.2
  • 10
    • 58549110252 scopus 로고    scopus 로고
    • Stochastic modelling for quantitative description of heterogeneous biological systems
    • 10.1038/nrg2509 19139763
    • Stochastic modelling for quantitative description of heterogeneous biological systems. Darren J Wilkinson, Nature Reviews Genetics 2009 10 2 122 133 10.1038/nrg2509 19139763
    • (2009) Nature Reviews Genetics , vol.10 , Issue.2 , pp. 122-133
    • Wilkinson, D.J.1
  • 11
    • 66249101730 scopus 로고    scopus 로고
    • Complexity and Self-organization
    • CRC Press, Taylor & Francis Bates MJ, Maack MN 3
    • Complexity and Self-organization. F Heylighen, Encyclopedia of Library and Information Sciences CRC Press, Taylor & Francis, Bates MJ, Maack MN, 3 2009 http://pespmc1.vub.ac.be/Papers/ELIS-complexity.pdf
    • (2009) Encyclopedia of Library and Information Sciences
    • Heylighen, F.1
  • 12
    • 0004082807 scopus 로고    scopus 로고
    • Information and Self-organization: A Macroscopic Approach to Complex Systems
    • Springer Berlin Heidelberg 3
    • Information and Self-organization: A Macroscopic Approach to Complex Systems. H Haken, Springer Series in Synergetics Springer Berlin Heidelberg 3 2006
    • (2006) Springer Series in Synergetics
    • Haken, H.1
  • 13
    • 53249119181 scopus 로고    scopus 로고
    • Systems biology at the Institute for Systems Biology
    • 10.1093/bfgp/eln027 18579616
    • Systems biology at the Institute for Systems Biology. L Hood, L Rowen, DJ Galas, JD Aitchison, Brief Funct Genomic Proteomic 2008 7 239 48 10.1093/bfgp/eln027 18579616
    • (2008) Brief Funct Genomic Proteomic , vol.7 , pp. 239-248
    • Hood, L.1    Rowen, L.2    Galas, D.J.3    Aitchison, J.D.4
  • 15
    • 50649101988 scopus 로고    scopus 로고
    • From the determination of complex reaction mechanisms to systems biology
    • 10.1146/annurev.biochem.77.102507.115132 18393674
    • From the determination of complex reaction mechanisms to systems biology. J Ross, Annu Rev Biochem 2008 77 479 494 10.1146/annurev.biochem.77.102507. 115132 18393674
    • (2008) Annu Rev Biochem , vol.77 , pp. 479-494
    • Ross, J.1
  • 16
    • 65449121432 scopus 로고    scopus 로고
    • Can complex cellular processes be governed by simple linear rules?
    • 10.1142/S0219720009003947 19226669
    • Can complex cellular processes be governed by simple linear rules? K Selvarajoo, M Tomita, M Tsuchiya, J Bioinform Comput Biol 2009 7 1 243 268 10.1142/S0219720009003947 19226669
    • (2009) J Bioinform Comput Biol , vol.7 , Issue.1 , pp. 243-268
    • Selvarajoo, K.1    Tomita, M.2    Tsuchiya, M.3
  • 17
    • 4444371652 scopus 로고    scopus 로고
    • Temporal analysis of phosphotyrosine-dependent signaling networks by quantitative proteomics
    • DOI 10.1038/nbt1005
    • Temporal analysis of phosphotyrosine-dependent signaling networks by quantitative proteomics. B Blagoev, SE Ong, I Kratchmarova, M Mann, Nat Biotechnol 2004 22 1139 1145 10.1038/nbt1005 15314609 (Pubitemid 39166852)
    • (2004) Nature Biotechnology , vol.22 , Issue.9 , pp. 1139-1145
    • Blagoev, B.1    Ong, S.-E.2    Kratchmarova, I.3    Mann, M.4
  • 19
    • 32344431844 scopus 로고    scopus 로고
    • Discovering differential activation machinery of the Toll-like receptor 4 signaling pathways in MyD88 knockouts
    • DOI 10.1016/j.febslet.2006.01.046, PII S0014579306000998
    • Discovering differential activation machinery of the Toll-like receptor 4 signaling pathways in MyD88 knockouts. K Selvarajoo, FEBS Lett 2006 580 1457 64 10.1016/j.febslet.2006.01.046 16458306 (Pubitemid 43222015)
    • (2006) FEBS Letters , vol.580 , Issue.5 , pp. 1457-1464
    • Selvarajoo, K.1
  • 20
    • 85032330552 scopus 로고    scopus 로고
    • Decoding the Signaling Mechanism of Toll-Like Receptor 4 Pathways in Wild Type and Knockouts
    • New York: Landes Bioscience and Springer Science Ghosh S, Arjunan S, Dhar P, Tomita M
    • Decoding the Signaling Mechanism of Toll-Like Receptor 4 Pathways in Wild Type and Knockouts. K Selvarajoo, E-Cell System - Basic Concepts and Applications New York: Landes Bioscience and Springer Science, Ghosh S, Arjunan S, Dhar P, Tomita M, 2007 http://www.landesbioscience.com/curie/chapter/3584/
    • (2007) E-Cell System - Basic Concepts and Applications
    • Selvarajoo, K.1
  • 21
    • 61849175381 scopus 로고    scopus 로고
    • Predicting novel features of toll-like receptor 3 signaling in macrophages
    • 10.1371/journal.pone.0004661 19252739
    • Predicting novel features of toll-like receptor 3 signaling in macrophages. M Helmy, J Gohda, J Inoue, M Tomita, M Tsuchiya, K Selvarajoo, PLoS One 2009 4 4661 10.1371/journal.pone.0004661 19252739
    • (2009) PLoS One , vol.4 , pp. 54661
    • Helmy, M.1    Gohda, J.2    Inoue, J.3    Tomita, M.4    Tsuchiya, M.5    Selvarajoo, K.6
  • 22
    • 24944489952 scopus 로고    scopus 로고
    • Stimulus specificity of gene expression programs determined by temporal control of IKK activity
    • DOI 10.1126/science.1113319
    • Stimulus specificity of gene expression programs determined by temporal control of IKK activity. SL Werner, D Barken, A Hoffmann, Science 2005 309 1857 61 10.1126/science.1113319 16166517 (Pubitemid 41325096)
    • (2005) Science , vol.309 , Issue.5742 , pp. 1857-1861
    • Werner, S.L.1    Barken, D.2    Hoffmann, A.3
  • 23
    • 40949134086 scopus 로고    scopus 로고
    • TRAM couples endocytosis of Toll-like receptor 4 to the induction of interferon-β
    • DOI 10.1038/ni1569, PII NI1569
    • TRAM couples endocytosis of Toll-like receptor 4 to the induction of interferon-beta. JC Kagan, T Su, T Horng, A Chow, S Akira, R Medzhitov, Nat Immunol 2008 9 361 8 10.1038/ni1569 18297073 (Pubitemid 351405105)
    • (2008) Nature Immunology , vol.9 , Issue.4 , pp. 361-368
    • Kagan, J.C.1    Su, T.2    Horng, T.3    Chow, A.4    Akira, S.5    Medzhitov, R.6
  • 25
    • 77951876275 scopus 로고    scopus 로고
    • Spatio-temporal modeling of signaling protein recruitment to EGFR
    • 10.1186/1752-0509-4-57 20459599
    • Spatio-temporal modeling of signaling protein recruitment to EGFR. MY Hsieh, S Yang, MA Raymond-Stinz, JS Edwards, BS Wilson, BMC Syst Biol 2010 4 57 10.1186/1752-0509-4-57 20459599
    • (2010) BMC Syst Biol , vol.4 , pp. 57
    • Hsieh, M.Y.1    Yang, S.2    Raymond-Stinz, M.A.3    Edwards, J.S.4    Wilson, B.S.5
  • 26
    • 41749107942 scopus 로고    scopus 로고
    • Stochasticity and cell fate
    • DOI 10.1126/science.1147888
    • Stochasticity and cell fate. R Losick, C Desplan, Science 2008 320 65 68 10.1126/science.1147888 18388284 (Pubitemid 351490752)
    • (2008) Science , vol.320 , Issue.5872 , pp. 65-68
    • Losick, R.1    Desplan, C.2
  • 27
    • 77956520011 scopus 로고    scopus 로고
    • Functional roles for noise in genetic circuits
    • 10.1038/nature09326 20829787
    • Functional roles for noise in genetic circuits. A Eldar, MB Elowitz, Nature 2010 467 167 73 10.1038/nature09326 20829787
    • (2010) Nature , vol.467 , pp. 167-173
    • Eldar, A.1    Elowitz, M.B.2
  • 28
    • 77249114260 scopus 로고    scopus 로고
    • Variability in gene expression underlies incomplete penetrance
    • 10.1038/nature08781 20164922
    • Variability in gene expression underlies incomplete penetrance. A Raj, SA Rifkin, E Andersen, A van Oudenaarden, Nature 2010 463 913 8 10.1038/nature08781 20164922
    • (2010) Nature , vol.463 , pp. 913-918
    • Raj, A.1    Rifkin, S.A.2    Andersen, E.3    Van Oudenaarden, A.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.