-
1
-
-
84986522918
-
ICM: a new method for protein modeling and design: applications to docking and structure prediction from the distorted native conformation
-
Abagyan,R.A. et al. (1994) ICM: a new method for protein modeling and design: applications to docking and structure prediction from the distorted native conformation. J. Comput. Chem., 15, 488-506.
-
(1994)
J. Comput. Chem.
, vol.15
, pp. 488-506
-
-
Abagyan, R.A.1
-
2
-
-
0033954256
-
The Protein Data Bank
-
Berman,H.M. et al. (2000) The Protein Data Bank. Nucleic Acids Res., 28, 235-242.
-
(2000)
Nucleic Acids Res.
, vol.28
, pp. 235-242
-
-
Berman, H.M.1
-
3
-
-
2142738304
-
WebLogo: a sequence logo generator
-
Crooks,G.E. et al. (2004) WebLogo: a sequence logo generator. Genome Res., 14, 1188-1190.
-
(2004)
Genome Res.
, vol.14
, pp. 1188-1190
-
-
Crooks, G.E.1
-
4
-
-
75549091258
-
IMGT/3Dstructure-DB and IMGT/DomainGapAlign: a database and a tool for immunoglobulins or antibodies, T cell receptors, MHC, IgSF and MhcSF
-
Ehrenmann,F. et al. (2010) IMGT/3Dstructure-DB and IMGT/DomainGapAlign: a database and a tool for immunoglobulins or antibodies, T cell receptors, MHC, IgSF and MhcSF. Nucleic Acids Res., 38, D301-D307.
-
(2010)
Nucleic Acids Res.
, vol.38
-
-
Ehrenmann, F.1
-
5
-
-
0037314055
-
MPID: MHC-Peptide Interaction Database for sequence-structure-function information on peptides binding to MHC molecules
-
Govindarajan,K.R. et al. (2003) MPID: MHC-Peptide Interaction Database for sequence-structure-function information on peptides binding to MHC molecules. Bioinformatics, 19, 309-310.
-
(2003)
Bioinformatics
, vol.19
, pp. 309-310
-
-
Govindarajan, K.R.1
-
6
-
-
32544458887
-
T cell receptor/peptide/MHC molecular characterization and standardized pMHC contact sites in IMGT/3Dstructure-DB
-
Kaas,Q. and Lefranc,M.P. (2005) T cell receptor/peptide/MHC molecular characterization and standardized pMHC contact sites in IMGT/3Dstructure-DB. In Silico Biol., 5, 505-528.
-
(2005)
In Silico Biol.
, vol.5
, pp. 505-528
-
-
Kaas, Q.1
Lefranc, M.P.2
-
7
-
-
0347755625
-
IMGT/3Dstructure-DB and IMGT/StructuralQuery, a database and a tool for immunoglobulin, T cell receptor and MHC structural data
-
Kaas,Q. et al. (2004) IMGT/3Dstructure-DB and IMGT/StructuralQuery, a database and a tool for immunoglobulin, T cell receptor and MHC structural data. Nucleic Acids Res., 32, D208-D210.
-
(2004)
Nucleic Acids Res.
, vol.32
-
-
Kaas, Q.1
-
8
-
-
46049113012
-
IMGT standardization for molecular characterization of the T cell receptor/peptide/MHC complexes
-
Schoenbach,C. et al. (eds), Springer, New York
-
Kaas,Q. et al. (2008) IMGT standardization for molecular characterization of the T cell receptor/peptide/MHC complexes. In Schoenbach,C. et al. (eds) Immunoinformatics, Immunomics Reviews Series. Springer, New York, pp. 19-49.
-
(2008)
Immunoinformatics, Immunomics Reviews Series
, pp. 19-49
-
-
Kaas, Q.1
-
9
-
-
77957256879
-
Structural immunoinformatics: understanding MHC-peptide-TR binding
-
Davies,M.N. et al. (eds), Springer, New York
-
Khan,J.M. et al. (2010) Structural immunoinformatics: understanding MHC-peptide-TR binding. In Davies,M.N. et al. (eds) Bioinformatics for Immunomics, Vol. 3, Springer, New York, pp. 77-94.
-
(2010)
Bioinformatics for Immunomics
, vol.3
, pp. 77-94
-
-
Khan, J.M.1
-
10
-
-
21444450056
-
IMGT unique numbering for MHC groove G-DOMAIN and MHC superfamily (MhcSF) G-LIKE-DOMAIN
-
Lefranc,M.P. et al. (2005) IMGT unique numbering for MHC groove G-DOMAIN and MHC superfamily (MhcSF) G-LIKE-DOMAIN. Dev. Comput. Immunol., 29, 917-938.
-
(2005)
Dev. Comput. Immunol.
, vol.29
, pp. 917-938
-
-
Lefranc, M.P.1
-
11
-
-
2642524483
-
A physical reference state unifies the structure-derived potential of mean force for protein folding and binding
-
Liu,S. et al. (2004) A physical reference state unifies the structure-derived potential of mean force for protein folding and binding. Proteins, 56, 93-101.
-
(2004)
Proteins
, vol.56
, pp. 93-101
-
-
Liu, S.1
-
12
-
-
0033388725
-
SYFPEITHI:d atabase for MHC ligands and peptide motifs
-
Rammensee,H. et al. (1999) SYFPEITHI:d atabase for MHC ligands and peptide motifs. Immunogenetics, 50, 213-219.
-
(1999)
Immunogenetics
, vol.50
, pp. 213-219
-
-
Rammensee, H.1
-
13
-
-
48449097801
-
webPIPSA: a web server for the comparison of protein interaction properties
-
Richter,S. et al. (2008) webPIPSA: a web server for the comparison of protein interaction properties. Nucleic Acids Res., 36, W276-W280.
-
(2008)
Nucleic Acids Res.
, vol.36
-
-
Richter, S.1
-
14
-
-
0035161548
-
IMGT/HLA Database-a sequence database for the human major histocompatibility complex
-
Robinson,J. et al. (2001) IMGT/HLA Database-a sequence database for the human major histocompatibility complex. Nucleic Acids Res., 29, 210-213.
-
(2001)
Nucleic Acids Res.
, vol.29
, pp. 210-213
-
-
Robinson, J.1
-
15
-
-
33744940243
-
MPID-T: database for sequence-structure-function information on T-cell receptor/peptide/MHC interactions
-
Tong,J.C. et al. (2006) MPID-T: database for sequence-structure-function information on T-cell receptor/peptide/MHC interactions. Appl. Bioinformatics, 5, 111-114.
-
(2006)
Appl. Bioinformatics
, vol.5
, pp. 111-114
-
-
Tong, J.C.1
-
16
-
-
33846703888
-
In silico grouping of peptide/HLA class I complexes using structural interaction characteristics
-
Tong,J.C. et al. (2007) In silico grouping of peptide/HLA class I complexes using structural interaction characteristics. Bioinformatics, 23, 177-183.
-
(2007)
Bioinformatics
, vol.23
, pp. 177-183
-
-
Tong, J.C.1
-
17
-
-
0028922586
-
LIGPLOT: a program to generate schematic diagrams of protein-ligand interactions
-
Wallace,A.C. et al. (1995) LIGPLOT: a program to generate schematic diagrams of protein-ligand interactions. Protein Eng., 8, 127-134.
-
(1995)
Protein Eng.
, vol.8
, pp. 127-134
-
-
Wallace, A.C.1
|