Characterization of the effective cellulose degrading strain CTL-6

Journal of Environmental Sciences

Volumn 23, Issue 4, 2011, Pages 649-655

  Lü, Yucai ^a,b   Wang, Xiaofen ^b   Li, Ning ^a   Wang, Xiaojuan ^b   Ishii, Masaharu ^c   Igarashi, Yasuo ^c   Cui, Zongjun ^b  

^a CHINA THREE GORGES UNIVERSITY   (China)

^b CHINA AGRICULTURAL UNIVERSITY   (China)

^c UNIVERSITY OF TOKYO   (Japan)

Author keywords

Anaerobic bacterium; Cellulose degradation capability; Cellulose degrading bacterium; Clostridium

Indexed keywords

16S RRNA GENE SEQUENCE; AEROBIC CONDITION; ANAEROBIC BACTERIUM; ANAEROBIC CONDITIONS; ANAEROBIC CULTURES; CELLOBIOSE; CELLULOSE DEGRADATION; CELLULOSE DEGRADATION CAPABILITY; CELLULOSE DEGRADING BACTERIA; CLOSTRIDIUM THERMOCELLUM; DEGRADATION EFFICIENCY; HEAT-SHOCK; SEPARATION TECHNIQUES; SOLE CARBON SOURCE; SOLID-LIQUID; WEIGHT LOSS; WHEAT STRAWS;

BACTERIOLOGY; CELLULOSE; CLOSTRIDIUM; GENES; GLUCOSE; RNA;

DEGRADATION;

BACTERIAL PROTEIN; CARBON; CARBOXYMETHYLCELLULASE; CELLULASE; CELLULOSE; RNA 16S;

ANOXIC CONDITIONS; BACTERIUM; CELLULOSE; DEGRADATION; GLUCOSE; OXIC CONDITIONS; RNA; STRAIN; WHEAT;

ARTICLE; CLOSTRIDIUM; DENATURING GRADIENT GEL ELECTROPHORESIS; ENZYMOLOGY; GENETICS; GROWTH, DEVELOPMENT AND AGING; METABOLISM; MOLECULAR GENETICS; PAPER; PHASE CONTRAST MICROSCOPY; PHYLOGENY; RESTRICTION FRAGMENT LENGTH POLYMORPHISM; TEMPERATURE;

BACTERIAL PROTEINS; CARBON; CELLULASE; CELLULOSE; CLOSTRIDIUM; DENATURING GRADIENT GEL ELECTROPHORESIS; MICROSCOPY, PHASE-CONTRAST; MOLECULAR SEQUENCE DATA; PAPER; PHYLOGENY; POLYMORPHISM, RESTRICTION FRAGMENT LENGTH; RNA, RIBOSOMAL, 16S; TEMPERATURE;

BACTERIA (MICROORGANISMS); CLOSTRIDIUM; CLOSTRIDIUM THERMOCELLUM; TRITICUM AESTIVUM;

EID: 79953892862     PISSN: 10010742     EISSN: None     Source Type: Journal    
DOI: 10.1016/S1001-0742(10)60460-3     Document Type: Article

References (26)

1. Bayer EA, Shoham Y, Lamed R Cellulose-decomposing bacteria and their enzyme systems. The Prokaryotes 2006, 2:578-617.
2. Coughlan MP, Mayer F The cellulose-decomposing bacteria and their enzyme systems. The Prokaryotes I 1992, 460-516. Springer, Berlin. 2nd ed. A. Balows, H.G. Trüper, M. Dworkin, W. Harder, K.H. Schleifer (Eds.).
3. Collins MD, Lawson PA, Willems A, Cordoba JJ, Fernandez -Garayzabal J, Garcia P, et al. The phylogeny of the genus Clostridium: Proposal of five new genera and eleven new species combinations. International Journal of Systematic Bacteriology 1994, 44:812-826.
4. Cui Z, Piao Z, Wang W, Su B, Yu H Conditions of cellulase production in the presence of microbial consortia MC1 capable of degrading cellulose with high efficiency. Journal of Agro-environmental Science 2004, 23(2):296-299.
5. Demain AL, Newcomb M, Wu JHD Cellulase, clostridia, and ethanol. Microbiology and Molecular Biology Reviews 2005, 69(1):124-154.
6. Devereux R, Willis SG Amplification of ribosomal RNA sequences. Molecular Microbial Ecology Manual 1995, 1-11. Kluwer, Dordrecht, 3.3.1. A.D.L. Akkermans, J.D. van Elsas, F.J. de Bruijn (Eds.).
7. Editorial Committee of China Agriculture Yearbook China Agriculture Yearbook 2005, 177. China Agriculture Press, Beijing.
8. Faiez A, William AA, Murray M New isolate of Streptomyces sp. with novel thermoalkalotolerant cellulases. Biotechnology Letters 2008, 30(1):123-126.
9. Han SO, Yukawa I, Inui A, Doi RH Regulation of expression of cellulosomal cellulase and hemicellulase genes in Clostridium cellulovorans. Journal of Bacteriology 2003, 185(20):6067-6075.
10. Haruta S, Cui Z, Huang Z, Li M, Ishii M, Igarashi Y Construction of a stable microbial community with high cellulose-degradation ability. Applied Microbiology and Biotechnology 2002, 59(4):529-534.
11. Hori T, Haruta S, Ueno Y, Ishii M, Igarashi Y Dynamic transition of a methanogenic population in response to the concentration of volatile fatty acids in a thermophilic anaerobic digester. Applied and Environmental Microbiology 2006, 72(2):1623-1630.
12. Kato S, Haruta S, Cui Z, Ishii M, Igarashi Y Effective cellulose degradation by a mixed-culture system composed of a cellulolytic Clostridium and aerobic non-cellulolytic bacteria. FEMS Microbiology Ecology 2004, 51(1):133-142.
13. Lü Y, Zhu W, Cui Z, Wang X, Ling C, Cheng X Characterization and community diversity of cellulose-degrading microflora WDC2 during degrading wheat straw. Journal of China Agricultural University 2009, 14(5):40-46.
14. Muyzer G, De Waal E C, Uitterlinden AG Profiling of complex microbial populations by denaturing gradient gel electrophoresis analysis of polymerase chain reaction-amplified genes coding for 16S rRNA. Applied and Environmental Microbiology 1993, 59(3):695-700.
15. Ng TK, Weimer PJ, Zeikus JG Cellulolytic and physiological properties of Clostridium thermocellum. Archives of Microbiology 1977, 114:1-7.
16. Pedro MS, Haruta S, Hazaka M, Shimada R, Yoshida C, Hiura K, et al. Denaturing gradient gel electrophoresis analyses of microbial community from fieldscale composter. Journal of Bioscience and Bioengineering 2001, 91(2):159-165.
17. Reynolds PHS, Sissons CH, Daniel RM, Morgan HW Comparison of cellulolytic activities in Clostridium thermocellum and three thermophilic, cellulolytic anaerobes. Applied and Environmental Microbiology 1985, 51(1):12-17.
18. Shiratori H, Ikeno H, Ayame S, Kataoka N, Miya A, Hosono K, et al. Isolation and characterization of a new Clostridium sp. that performs effective cellulosic waste digestion in a thermophilic methanogenic bioreactor. Applied and Environmental Microbiology 2006, 72(5):3702-3709.
19. Singh J, Batra N, Sobti RC A highly thermostable, alkaline CMCase produced by a newly isolated Bacillus sp. VG1. World Journal of Microbiology and Biotechnology 2001, 17(8):761-765.
20. Takeshita T, Nakano Y, Yamashita Y Improved accuracy in terminal restriction fragment length polymorphism phylogenetic analysis using a novel internal size standard definition. Oral Microbiology and Immunology 2007, 22(6):419-428.
21. Tailliez P, Girard H, Millet J, Beguin P Enhanced cellulose fermentation by an asporogenous and ethanol-tolerant mutant of Clostridium thermocellum. Applied and Environmental Microbiology 1989, 55(1):207-211.
22. Ueno Y, Sasaki D, Fukui H, Haruta S, shii M, Igarashi Y Changes in bacterial community during fermentative hydrogen and acid production from organic waste by thermophilic anaerobic microflora. Journal of Applied Microbiology 2006, 101(2):331-343.
23. Wang X, Haruta S, Wang P, Ishii M, Igarashi Y, Cui Z Diversity of a stable enrichment culture which is useful for silage inoculant and its succession in alfalfa silage. FEMS Microbiology Ecology 2006, 57(1):106-115.
24. Yang JC, Chynoweth DP, Williams DS, Li A Clostridium aldrichii sp. nov., a cellulolytic mesophile inhabiting a wood-fermenting anaerobic digester. International Journal of Systematic Bacteriology 1990, 40:268-272.
25. Zavarzina DG, Zhilina TN, Tourova TP, Kuznetsov BB, Kostrikina NA, Bonch-Osmolovskaya EA Thermanaerovibrio velox sp. nov., a new anaerobic, thermophilic, organotrophic bacterium that reduces elemental sulfur, and emended description of the genus Thermanaerovibrio. International Journal of Systematic and Evolutionary Microbiology 2000, 50:1287-1295.
26. Zhu H, Qu F, Zhu LH Isolation of genomic DNAs from plants, fungi and bacteria using benzyl chloride. Nucleic Acids Research 1993, 21(22):5279-5280.