Towards accurate detection and genotyping of expressed variants from whole transcriptome sequencing data

2011 IEEE 1st International Conference on Computational Advances in Bio and Medical Sciences, ICCABS 2011

Volumn , Issue , 2011, Pages 87-92

  Duitama, Jorge ^a   Srivastava, Pramod K ^b   Mandoiu, Ion I ^a  

^a University of Connecticut   (United States)

^b UNIVERSITY OF CONNECTICUT HEALTH CENTER   (United States)

Author keywords

Genotyping; High throughput sequencing; Read mapping; RNA Seq; Variant detection

Indexed keywords

BAYESIAN MODEL; BLOOD CELLS; CAUSAL RELATIONSHIPS; COMPUTATIONAL CHALLENGES; EXPRESSION LEVELS; GENETIC VARIABILITY; GENETIC VARIANTS; GENOME SEQUENCING; GENOTYPING; GNU GENERAL PUBLIC LICENSE; HIGH-THROUGHPUT SEQUENCING; OPEN-SOURCE CODE; READ MAPPING; SINGLE NUCLEOTIDES; STATISTICAL MODELS; TRANSCRIPTOMES; VARIANT DETECTION;

BAYESIAN NETWORKS; BLOOD; GENES; MAPPING; MEDICAL COMPUTING; NUCLEIC ACIDS; OPEN SYSTEMS;

RNA;

EID: 79953828108     PISSN: None     EISSN: None     Source Type: Conference Proceeding    
DOI: 10.1109/ICCABS.2011.5729949     Document Type: Conference Paper

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