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Volumn 76, Issue 2, 2011, Pages 278-288

Effect of nitrate, acetate, and hydrogen on native perchlorate-reducing microbial communities and their activity in vadose soil

Author keywords

Denitrification; Perchlorate reductase gene; Perchlorate reduction; Real time quantitative PCR; Vadose soil

Indexed keywords

ACETIC ACID DERIVATIVE; BACTERIAL DNA; HYDROGEN; NITRATE; OXIDOREDUCTASE; PERCHLORATE; PERCHLORIC ACID; RNA 16S;

EID: 79953790872     PISSN: 01686496     EISSN: 15746941     Source Type: Journal    
DOI: 10.1111/j.1574-6941.2011.01045.x     Document Type: Article
Times cited : (25)

References (58)
  • 1
    • 0035073389 scopus 로고    scopus 로고
    • Dechloromonas agitata gen. nov., sp. nov. and Dechlorosoma suillum gen. nov., sp. nov., two novel environmentally dominant (per)chlorate-reducing bacteria and their phylogenetic position
    • Achenbach LA, Michaelidou U, Bruce RA, Fryman J & Coates JD (2001) Dechloromonas agitata gen. nov., sp. nov. and Dechlorosoma suillum gen. nov., sp. nov., two novel environmentally dominant (per)chlorate-reducing bacteria and their phylogenetic position. Int J Syst Evol Micr 51: 527-533.
    • (2001) Int J Syst Evol Micr , vol.51 , pp. 527-533
    • Achenbach, L.A.1    Michaelidou, U.2    Bruce, R.A.3    Fryman, J.4    Coates, J.D.5
  • 3
    • 0033171582 scopus 로고    scopus 로고
    • Reduction of (per)chlorate by a novel organism isolated from paper mill waste
    • Bruce RA, Achenbach LA & Coates JD (1999) Reduction of (per)chlorate by a novel organism isolated from paper mill waste. Environ Microbiol 1: 319-329.
    • (1999) Environ Microbiol , vol.1 , pp. 319-329
    • Bruce, R.A.1    Achenbach, L.A.2    Coates, J.D.3
  • 5
    • 79953801459 scopus 로고    scopus 로고
    • California Department of Public Health History of perchlorate in California drinking water. Available at (accessed on February 9, 2008).
    • California Department of Public Health (2007a) History of perchlorate in California drinking water. Available at (accessed on February 9, 2008).
    • (2007)
  • 6
    • 79953773186 scopus 로고    scopus 로고
    • California Department of Public Health State adoption of a perchlorate standard. Available at (accessed on February 14, 2008).
    • California Department of Public Health (2007b) State adoption of a perchlorate standard. Available at (accessed on February 14, 2008).
    • (2007)
  • 8
    • 54049095510 scopus 로고    scopus 로고
    • Chemisorption of oxygen onto activated carbon can enhance the stability of biological perchlorate reduction in fixed bed biofilm reactors
    • Choi YC, Li X, Raskin L & Morgenroth E (2008) Chemisorption of oxygen onto activated carbon can enhance the stability of biological perchlorate reduction in fixed bed biofilm reactors. Water Res 42: 3425-3434.
    • (2008) Water Res , vol.42 , pp. 3425-3434
    • Choi, Y.C.1    Li, X.2    Raskin, L.3    Morgenroth, E.4
  • 10
  • 12
    • 46549087608 scopus 로고    scopus 로고
    • Perchlorate biodegradation in contaminated soils and the deep unsaturated zone
    • Gal H, Ronen Z, Weisbrod N, Dahan O & Nativ R (2008) Perchlorate biodegradation in contaminated soils and the deep unsaturated zone. Soil Biol Biochem 40: 1751-1757.
    • (2008) Soil Biol Biochem , vol.40 , pp. 1751-1757
    • Gal, H.1    Ronen, Z.2    Weisbrod, N.3    Dahan, O.4    Nativ, R.5
  • 13
    • 0032964425 scopus 로고    scopus 로고
    • PCR detection of genes encoding nitrite reductase in denitrifying bacteria
    • Hallin S & Lindgren PE (1999) PCR detection of genes encoding nitrite reductase in denitrifying bacteria. Appl Environ Microb 65: 1652-1657.
    • (1999) Appl Environ Microb , vol.65 , pp. 1652-1657
    • Hallin, S.1    Lindgren, P.E.2
  • 16
    • 0032912373 scopus 로고    scopus 로고
    • Bacterial reduction of perchlorate and nitrate in water
    • Herman DC & Frankenberger WT (1999) Bacterial reduction of perchlorate and nitrate in water. J Environ Qual 28: 1018-1024.
    • (1999) J Environ Qual , vol.28 , pp. 1018-1024
    • Herman, D.C.1    Frankenberger, W.T.2
  • 17
    • 33748792525 scopus 로고    scopus 로고
    • Abundance of narG, nirS, nirK, and nosZ genes of denitrifying bacteria during primary successions of a glacier foreland
    • Kandeler E, Deiglmayr K, Tscherko D, Bru D & Philippot L (2006) Abundance of narG, nirS, nirK, and nosZ genes of denitrifying bacteria during primary successions of a glacier foreland. Appl Environ Microb 72: 5957-5962.
    • (2006) Appl Environ Microb , vol.72 , pp. 5957-5962
    • Kandeler, E.1    Deiglmayr, K.2    Tscherko, D.3    Bru, D.4    Philippot, L.5
  • 23
    • 79953768983 scopus 로고    scopus 로고
    • Massachusetts Department of Environmental Protection Perchlorate in public drinking water. Available at (accessed on February 12, 2008).
    • Massachusetts Department of Environmental Protection (2006) Perchlorate in public drinking water. Available at (accessed on February 12, 2008).
    • (2006)
  • 24
    • 0035708743 scopus 로고    scopus 로고
    • Perchlorate: problems, detection, and solutions
    • Motzer WE (2001) Perchlorate: problems, detection, and solutions. Environ Forensics 2: 301-311.
    • (2001) Environ Forensics , vol.2 , pp. 301-311
    • Motzer, W.E.1
  • 25
    • 4344690893 scopus 로고    scopus 로고
    • Hydrogen-based, hollow-fiber membrane biofilm reactor for reduction of perchlorate and other oxidized contaminants
    • Nerenberg R & Rittmann BE (2004) Hydrogen-based, hollow-fiber membrane biofilm reactor for reduction of perchlorate and other oxidized contaminants. Water Sci Technol 49: 223-230.
    • (2004) Water Sci Technol , vol.49 , pp. 223-230
    • Nerenberg, R.1    Rittmann, B.E.2
  • 26
    • 33748313052 scopus 로고    scopus 로고
    • Kinetics of a hydrogen-oxidizing, perchlorate-reducing bacterium
    • Nerenberg R, Kawagoshi Y & Rittmann BE (2006) Kinetics of a hydrogen-oxidizing, perchlorate-reducing bacterium. Water Res 40: 3290-3296.
    • (2006) Water Res , vol.40 , pp. 3290-3296
    • Nerenberg, R.1    Kawagoshi, Y.2    Rittmann, B.E.3
  • 27
    • 38949099332 scopus 로고    scopus 로고
    • Microbial ecology of a perchlorate-reducing, hydrogen-based membrane biofilm reactor
    • Nerenberg R, Kawagoshi Y & Rittmann BE (2008) Microbial ecology of a perchlorate-reducing, hydrogen-based membrane biofilm reactor. Water Res 42: 1151-1159.
    • (2008) Water Res , vol.42 , pp. 1151-1159
    • Nerenberg, R.1    Kawagoshi, Y.2    Rittmann, B.E.3
  • 28
    • 22144480310 scopus 로고    scopus 로고
    • Reduction of perchlorate and nitrate by microbial communities in vadose soil
    • Nozawa-Inoue M, Scow KM & Rolston DE (2005) Reduction of perchlorate and nitrate by microbial communities in vadose soil. Appl Environ Microb 71: 3928-3934.
    • (2005) Appl Environ Microb , vol.71 , pp. 3928-3934
    • Nozawa-Inoue, M.1    Scow, K.M.2    Rolston, D.E.3
  • 29
    • 40849111496 scopus 로고    scopus 로고
    • Quantitative detection of perchlorate-reducing bacteria by real-time PCR targeting perchlorate reductase gene
    • Nozawa-Inoue M, Jien M, Hamilton NS, Stewart V, Scow KM & Hristova KR (2008) Quantitative detection of perchlorate-reducing bacteria by real-time PCR targeting perchlorate reductase gene. Appl Environ Microb 74: 1941-1944.
    • (2008) Appl Environ Microb , vol.74 , pp. 1941-1944
    • Nozawa-Inoue, M.1    Jien, M.2    Hamilton, N.S.3    Stewart, V.4    Scow, K.M.5    Hristova, K.R.6
  • 30
    • 0029853148 scopus 로고    scopus 로고
    • WWW-query: an on-line retrieval system for biological sequence banks
    • Perriere G & Gouy M (1996) WWW-query: an on-line retrieval system for biological sequence banks. Biochimie 78: 364-369.
    • (1996) Biochimie , vol.78 , pp. 364-369
    • Perriere, G.1    Gouy, M.2
  • 31
    • 0037184270 scopus 로고    scopus 로고
    • Denitrifying genes in bacterial and Archaeal genomes
    • Philippot L (2002) Denitrifying genes in bacterial and Archaeal genomes. Biochim Biophys Acta 1577: 355-376.
    • (2002) Biochim Biophys Acta , vol.1577 , pp. 355-376
    • Philippot, L.1
  • 32
    • 14644443587 scopus 로고    scopus 로고
    • Tracking nitrate reducers and denitrifiers in the environment
    • Philippot L (2005) Tracking nitrate reducers and denitrifiers in the environment. Biochem Soc Trans 33: 200-204.
    • (2005) Biochem Soc Trans , vol.33 , pp. 200-204
    • Philippot, L.1
  • 33
    • 32544446631 scopus 로고    scopus 로고
    • Use of functional genes to quantify denitrifiers in the environment
    • Philippot L (2006) Use of functional genes to quantify denitrifiers in the environment. Biochem Soc Trans 34: 101-103.
    • (2006) Biochem Soc Trans , vol.34 , pp. 101-103
    • Philippot, L.1
  • 35
    • 0030011204 scopus 로고    scopus 로고
    • Transformation of (per)chlorate into chloride by a newly isolated bacterium: reduction and dismutation
    • Rikken GB, Kroon AGM & Van Ginkel CG (1996) Transformation of (per)chlorate into chloride by a newly isolated bacterium: reduction and dismutation. Appl Microbiol Biot 45: 420-426.
    • (1996) Appl Microbiol Biot , vol.45 , pp. 420-426
    • Rikken, G.B.1    Kroon, A.G.M.2    Van Ginkel, C.G.3
  • 36
    • 0036330611 scopus 로고    scopus 로고
    • Biodiversity of denitrifying and dinitrogen-fixing bacteria in an acid forest soil
    • Rosch C, Mergel A & Bothe H (2002) Biodiversity of denitrifying and dinitrogen-fixing bacteria in an acid forest soil. Appl Environ Microb 68: 3818-3829.
    • (2002) Appl Environ Microb , vol.68 , pp. 3818-3829
    • Rosch, C.1    Mergel, A.2    Bothe, H.3
  • 37
    • 0023375195 scopus 로고
    • The neighbor-joining method: a new method for reconstructing phylogenetic trees
    • Saitou N & Nei M (1987) The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol Biol Evol 4: 406-425.
    • (1987) Mol Biol Evol , vol.4 , pp. 406-425
    • Saitou, N.1    Nei, M.2
  • 38
    • 22244461482 scopus 로고    scopus 로고
    • Accumulation and perchlorate exposure potential of lettuce produced in the Lower Colorado River region
    • Sanchez CA, Krieger RI, Khandaker N, Moore RC, Holts KC & Neidel LL (2005) Accumulation and perchlorate exposure potential of lettuce produced in the Lower Colorado River region. J Agric Food Chem 53: 5479-5486.
    • (2005) J Agric Food Chem , vol.53 , pp. 5479-5486
    • Sanchez, C.A.1    Krieger, R.I.2    Khandaker, N.3    Moore, R.C.4    Holts, K.C.5    Neidel, L.L.6
  • 39
    • 0032552093 scopus 로고    scopus 로고
    • Biodegradation of 1,1,1-trichloroethane by a carbon tetrachloride-degrading denitrifying consortium
    • Sherwood JL, Petersen JN & Skeen RS (1998) Biodegradation of 1, 1, 1-trichloroethane by a carbon tetrachloride-degrading denitrifying consortium. Biotechnol Bioeng 59: 393-399.
    • (1998) Biotechnol Bioeng , vol.59 , pp. 393-399
    • Sherwood, J.L.1    Petersen, J.N.2    Skeen, R.S.3
  • 40
    • 17844394470 scopus 로고    scopus 로고
    • Isolation and characterization of autotrophic, hydrogen-utilizing, perchlorate-reducing bacteria
    • Shrout JD, Scheetz TE, Casavant TL & Parkin GF (2005) Isolation and characterization of autotrophic, hydrogen-utilizing, perchlorate-reducing bacteria. Appl Microbiol Biot 67: 261-268.
    • (2005) Appl Microbiol Biot , vol.67 , pp. 261-268
    • Shrout, J.D.1    Scheetz, T.E.2    Casavant, T.L.3    Parkin, G.F.4
  • 41
    • 30344456697 scopus 로고    scopus 로고
    • Stimulation and molecular characterization of bacterial perchlorate degradation by plant-produced electron donors
    • Shrout JD, Struckhoff GC, Parkin GF & Schnoor JL (2006) Stimulation and molecular characterization of bacterial perchlorate degradation by plant-produced electron donors. Environ Sci Technol 40: 310-317.
    • (2006) Environ Sci Technol , vol.40 , pp. 310-317
    • Shrout, J.D.1    Struckhoff, G.C.2    Parkin, G.F.3    Schnoor, J.L.4
  • 42
    • 0033760479 scopus 로고    scopus 로고
    • Quantitative analysis of small-subunit rRNA genes in mixed microbial populations via 5'-nuclease assays
    • Suzuki MT, Taylor LT & DeLong EF (2000) Quantitative analysis of small-subunit rRNA genes in mixed microbial populations via 5'-nuclease assays. Appl Environ Microb 66: 4605-4614.
    • (2000) Appl Environ Microb , vol.66 , pp. 4605-4614
    • Suzuki, M.T.1    Taylor, L.T.2    DeLong, E.F.3
  • 43
    • 0842303588 scopus 로고    scopus 로고
    • Degradation kinetics of perchlorate in sediments and soils
    • Tan K, Anderson TA & Jackson WA (2004) Degradation kinetics of perchlorate in sediments and soils. Water Air Soil Pollut 151: 245-259.
    • (2004) Water Air Soil Pollut , vol.151 , pp. 245-259
    • Tan, K.1    Anderson, T.A.2    Jackson, W.A.3
  • 44
    • 0027968068 scopus 로고
    • CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
    • Thompson J, Higgins D & Gibson T (1994) CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucl Acids Res 22: 4673-4680.
    • (1994) Nucl Acids Res , vol.22 , pp. 4673-4680
    • Thompson, J.1    Higgins, D.2    Gibson, T.3
  • 45
    • 4344685944 scopus 로고    scopus 로고
    • Reassessing PCR primers targeting nirS, nirK and nosZ genes for community surveys of denitrifying bacteria with DGGE
    • Throback IN, Enwall K, Jarvis A & Hallin S (2004) Reassessing PCR primers targeting nirS, nirK and nosZ genes for community surveys of denitrifying bacteria with DGGE. FEMS Microbiol Ecol 49: 401-417.
    • (2004) FEMS Microbiol Ecol , vol.49 , pp. 401-417
    • Throback, I.N.1    Enwall, K.2    Jarvis, A.3    Hallin, S.4
  • 46
    • 0002137823 scopus 로고
    • Ecology of denitrification and dissimilatory nitrate reduction to ammonium
    • (Zehnder AJB, ed) Wiley, New York.
    • Tiedje JM (1988) Ecology of denitrification and dissimilatory nitrate reduction to ammonium. Biology of Anaerobic Microorganisms (Zehnder AJB, ed), pp. 179-244. Wiley, New York.
    • (1988) Biology of Anaerobic Microorganisms , pp. 179-244
    • Tiedje, J.M.1
  • 47
    • 0037233929 scopus 로고    scopus 로고
    • Transport and biodegradation of perchlorate in soils
    • Tipton DK, Rolston DE & Scow KM (2003) Transport and biodegradation of perchlorate in soils. J Environ Qual 32: 40-46.
    • (2003) J Environ Qual , vol.32 , pp. 40-46
    • Tipton, D.K.1    Rolston, D.E.2    Scow, K.M.3
  • 48
    • 0000043258 scopus 로고    scopus 로고
    • Perchlorate chemistry: implications for analysis and remediation
    • Urbansky ET (1998) Perchlorate chemistry: implications for analysis and remediation. Bioremed J 2: 81-95.
    • (1998) Bioremed J , vol.2 , pp. 81-95
    • Urbansky, E.T.1
  • 49
    • 0035136921 scopus 로고    scopus 로고
    • Perchlorate levels in samples of sodium nitrate fertilizer derived from Chilean caliche
    • Urbansky ET, Brown SK, Magnuson ML & Kelty CA (2001) Perchlorate levels in samples of sodium nitrate fertilizer derived from Chilean caliche. Environ Pollut 112: 299-302.
    • (2001) Environ Pollut , vol.112 , pp. 299-302
    • Urbansky, E.T.1    Brown, S.K.2    Magnuson, M.L.3    Kelty, C.A.4
  • 50
    • 79953773761 scopus 로고    scopus 로고
    • US Environmental Protection Agency Known perchlorate releases in the US - March 25, 2005. Available at (accessed on July 4, 2007).
    • US Environmental Protection Agency (2005a) Known perchlorate releases in the US - March 25, 2005. Available at (accessed on July 4, 2007).
    • (2005)
  • 51
    • 79953779677 scopus 로고    scopus 로고
    • US Environmental Protection Agency Perchlorate treatment technology update. Federal Facilities Forum Issue Paper, EPA 542-R-05-015.
    • US Environmental Protection Agency (2005b) Perchlorate treatment technology update. Federal Facilities Forum Issue Paper, EPA 542-R-05-015.
    • (2005)
  • 53
    • 79953772967 scopus 로고    scopus 로고
    • US Food and Drug Administration 2004-2005 Exploratory survey data on perchlorate in food. Available at (accessed on February 9, 2008).
    • US Food and Drug Administration (2005) 2004-2005 Exploratory survey data on perchlorate in food. Available at (accessed on February 9, 2008).
    • (2005)
  • 54
    • 0029866840 scopus 로고    scopus 로고
    • Identification of an anaerobic bacterium which reduces perchlorate and chlorate as Wolinella succinogenes
    • Wallace W, Ward T, Breen A & Attaway H (1996) Identification of an anaerobic bacterium which reduces perchlorate and chlorate as Wolinella succinogenes. J Ind Microbiol 16: 68-72.
    • (1996) J Ind Microbiol , vol.16 , pp. 68-72
    • Wallace, W.1    Ward, T.2    Breen, A.3    Attaway, H.4
  • 55
    • 1942539931 scopus 로고    scopus 로고
    • Perchlorate-reducing microorganisms isolated from contaminated sites
    • Waller AS, Cox EE & Edwards EA (2004) Perchlorate-reducing microorganisms isolated from contaminated sites. Environ Microbiol 6: 517-527.
    • (2004) Environ Microbiol , vol.6 , pp. 517-527
    • Waller, A.S.1    Cox, E.E.2    Edwards, E.A.3
  • 57
    • 23744437264 scopus 로고    scopus 로고
    • Molecular assessment of inoculated and indigenous bacteria in biofilms from a pilot-scale perchlorate-reducing bioreactor
    • Zhang H, Logan BE, Regan JM, Achenbach LA & Bruns MA (2005) Molecular assessment of inoculated and indigenous bacteria in biofilms from a pilot-scale perchlorate-reducing bioreactor. Microb Ecol 49: 388-398.
    • (2005) Microb Ecol , vol.49 , pp. 388-398
    • Zhang, H.1    Logan, B.E.2    Regan, J.M.3    Achenbach, L.A.4    Bruns, M.A.5
  • 58
    • 0036802415 scopus 로고    scopus 로고
    • Perchlorate reduction by a novel chemolithoautotrophic, hydrogen-oxidizing bacterium
    • Zhang HS, Bruns MA & Logan BE (2002) Perchlorate reduction by a novel chemolithoautotrophic, hydrogen-oxidizing bacterium. Environ Microbiol 4: 570-576.
    • (2002) Environ Microbiol , vol.4 , pp. 570-576
    • Zhang, H.S.1    Bruns, M.A.2    Logan, B.E.3


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