Microarray analysis of the phytoremediation and phytosensing of occupational toxicant naphthalene

Journal of Hazardous Materials

Volumn 189, Issue 1-2, 2011, Pages 19-26

  Peng, Ri He ^a   Xu, Ran Ran ^a   Fu, Xiao Yan ^a   Xiong, Ai Sheng ^a   Zhao, Wei ^a   Tian, Yong Sheng ^a   Zhu, Bo ^a   Jin, Xiao Fen ^a   Chen, Chen ^a   Han, Hong Juan ^a   Yao, Quan Hong ^a  

^a INSTITUTE OF EDIBLE FUNGI   (China)

Author keywords

Arabidopsis thaliana; Microarray analysis; Naphthalene; Phytoremediation; Phytosensing

Indexed keywords

ARABIDOPSIS THALIANA; DIFFERENTIALLY EXPRESSED GENE; ENVIRONMENTAL CONCERNS; GENE EXPRESSION PATTERNS; HUMAN CANCER; MICROARRAY ANALYSIS; PHYTOREMEDIATION; PHYTOSENSING; PLANT DEFENSE; PLANT RESPONSE;

BIOREMEDIATION; GENE EXPRESSION; RISK PERCEPTION;

NAPHTHALENE;

NAPHTHALENE;

CANCER; DETECTION METHOD; DICOTYLEDON; GENE EXPRESSION; HEALTH RISK; NAPHTHALENE; PHYTOREMEDIATION; PLANT DEFENSE; POLLUTANT REMOVAL; PUBLIC HEALTH;

ARABIDOPSIS; ARTICLE; CONJUGATION; GENE EXPRESSION; MICROARRAY ANALYSIS; PHYTOREMEDIATION; PLANT GROWTH; PLANT METABOLISM; PLANT STRESS; SIGNAL TRANSDUCTION; UPREGULATION;

ARABIDOPSIS; BIODEGRADATION, ENVIRONMENTAL; ENVIRONMENTAL POLLUTION; GENE EXPRESSION PROFILING; GENE EXPRESSION REGULATION, PLANT; HAZARDOUS SUBSTANCES; HUMANS; MICROARRAY ANALYSIS; NAPHTHALENES; OCCUPATIONAL EXPOSURE;

ARABIDOPSIS THALIANA;

EID: 79953787702     PISSN: 03043894     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.jhazmat.2010.12.114     Document Type: Article

References (44)

1. Aamot E., Steinnes E., Schmid R. Polycyclic aromatic hydrocarbons in Norwegian forest soils: impact of long range atmospheric transport. Environ. Pollut. 1996, 92:275-280.
2. White R.D. Refining and blending of aviation turbine fuels. Drug Chem. Toxicol. 1999, 22:143-153.
3. McDougal J.N., Pollard D.L., Weisman W., Garrett C.M., Miller T.E. Assessment of skin absorption and penetration of JP-8 jet fuel and its components. Toxicol. Sci. 2000, 55:247-255.
4. Preuss R., Angerer J., Drexler H. Naphthalene-an environmental and occupational toxicant. Int. Arch. Occup. Environ. Health 2003, 76:556-576.
5. Resnick S.M., Lee K., Gibson D.T. Diverse reactions catalyzed by naphthalene dioxygenase from Pseudomonas sp. strain NCIB 9816. J. Ind. Microbiol. Biotechnol. 1996, 17:438-457.
6. Peng R.H., Xiong A.S., Xue Y., Fu X.Y., Gao F., Zhao W., Tian Y.S., Yao Q.H. Microbial biodegradation of polyaromatic hydrocarbons. FEMS Microbiol. Rev. 2008, 32:927-955.
7. Hwang H.M., Hu X., Zhao X. Enhanced bioremediation of polycyclic aromatic hydrocarbons by environmentally friendly techniques. J. Environ. Sci. Health 2007, 25:313-352.
8. Meagher R.B. Phytoremediation of toxic elemental and organic pollutants. Curr. Opin. Plant Biol. 2000, 3:153-162.
9. Eapen S., Singh S., D'Souza S.F. Advances in development of transgenic plants for remediation of xenobiotic pollutants. Biotechnol. Adv. 2007, 25:442-451.
10. Newman L.A., Reynolds C.M. Phytodegradation of organic compounds. Curr. Opin. Biotechnol. 2004, 15:225-230.
11. Samsoe-Petersen E.H., Larsen P.B., Bruun P. Uptake of trace elements and PAHs by fruit and vegetables from contaminated soils. Environ. Sci. Technol. 2002, 36:3057-3063.
12. Watts A.W., Ballestero T.P., Gardner K.H. Uptake of polycyclic aromatic hydrocarbons (PAHs) in salt marsh plants Spartina alterniflora grown in contaminated sediments. Chemosphere 2006, 62:1253-1260.
13. Fryer M.E., Collins C.D. Model intercomparison for the uptake of organic chemicals by plants. Environ. Sci. Technol. 2003, 37:1617-1624.
14. Wild E., Dent J., Barber J.L., Thomas G.O., Jones K.C. A novel analytical approach for visualizing and tracking organic chemicals in plants. Environ. Sci. Technol. 2004, 38:4195-4199.
15. Alkio M., Tabuchi T.M., Wang X., Colón-Carmona A. Stress responses to polycyclic aromatic hydrocarbons in Arabidopsis include growth inhibition and hypersensitive response-like symptoms. J. Exp. Bot. 2005, 56:2983-2994.
16. Lichtenthaler H.K. Chlorophylls and carotenoids: pigments of photosynthetic biomembranes. Methods Enzymol. 1987, 148:350-382.
17. Baker N.R., Rosenqvist E. Applications of chlorophyll fluorescence can improve crop production strategies: an examination of future possibilities. J. Exp. Bot. 2004, 403:1607-1621.
18. Simonich S.L., Hites R.A. Organic pollutant accumulation in vegetation. Environ. Sci. Technol. 1995, 29:2095-2103.
19. Chiou C.T., Sheng G.Y., Manes M. A partition-limited model for the plant uptake of organic contaminants from soil and water. Environ. Sci. Technol. 2001, 35:1437-1444.
20. Gao Y., Zhu L. Plant uptake, accumulation and translocation of phenanthrene and pyrene in soils. Chemosphere 2004, 55:1169-1178.
21. Shimojima M., Ohta H., Iwamatsu A., Masuda T., Shioi Y., Takamiya K. Cloning of the gene for monogalactosyldiacylglycerol synthase and its evolutionary origin. Proc. Natl. Acad. Sci. U.S.A. 1997, 94:333-337.
22. Kader J.C. Lipid-transfer proteins in plants. Ann. Rev. Plant Physiol. Plant Mol. Biol. 1996, 47:627-654.
23. Sandermann H. Plant metabolism of xenobiotics. Trends Biochem. Sci. 1992, 17:82-84.
24. Komives T., Gullner G. Phase I xenobiotic metabolic systems in plants. Z. Naturforsch. [C] 2005, 60:179-185.
25. Raucy J.L., Allen S.W. Recent advances in P450 research. Pharmacogen. J. 2001, 1:178-186.
26. Durst F., Nelson D.R. Diversity and evolution of plant P450 and P450-reductases. Drug Metab. Drug Interact. 1995, 12:189-206.
27. Günther T., Sack U., Hofrichter M., Lätz M. Oxidation of PAH and PAH-derivatives by fungal and plant oxidoreductases. J. Basic Microbiol. 1998, 38:113-122.
28. Gramss G., Kirsche B., Voigt K.D., Günther T., Fritsche W. Conversion rates of five polycyclic aromatic hydrocarbons in liquid cultures of fifty eight fungi and the concomitant production of oxidative enzymes. Mycol. Res. 1999, 103:1009-1018.
29. Nousiainen U., Törrönen R., Hänninen O. Differential induction of various carboxylesterases by certain polycyclic aromatic hydrocarbons in the rat. Toxicology 1984, 32:243-251.
30. Coleman J.O., Blake-Kalff M.A.A., Emyr-Davis T.G. Detoxification of xenobiotics by plants: chemical modification and vacuolar compartmentalisation. Trends Plant. Sci. 1997, 2:144-151.
31. Owens I.S., Basu N.K., Banerjee R. UDP-glucuronosyltransferases: gene structures of UGT1 and UGT2 families. Methods Enzymol. 2005, 400:1-22.
32. Edwards R., Dixona D.P., Walbot V. Plant glutathione S-transferases: enzymes with multiple functions in sickness and in health. Trends Plant Sci. 2000, 5:193-198.
33. Brazier-Hicks M., Edwards R. Functional importance of the family 1 glucosyltransferase UGT72B1 in the metabolism of xenobiotics in Arabidopsis thaliana. Plant J. 2005, 42:556-566.
34. Wagner U., Edwards R., Dixon D.P., Mauch F. Probing the diversity of the Arabidopsis glutathione S-transferase gene family. Plant Mol. Biol. 2002, 49:515-532.
35. Martinoia E., Grill E., Tommasini R., Kreuz K., Amrhein N. ATP-dependent glutathione S-conjugate 'export' pump in the vacuolar membrane of plants. Nature 1993, 364:247-249.
36. Blokhina O., Fagerstedta K.V. Oxidative metabolism, ROS and NO under oxygen deprivation. Plant Physiol. Biochem. 2010, 48:359-373.
37. Grudkowska M., Zagdańska B. Multifunctional role of plant cysteine proteinases. Acta Biochim. Pol. 2004, 51:609-624.
38. Brancolini C. Inhibitors of the ubiquitin-proteasome system and the cell death machinery: how many pathways are activated?. Curr. Mol. Pharmacol. 2008, 1:24-37.
39. Lin S.I., Chiang S.F., Lin W.Y., Chen J.W., Tseng C.Y., Wu P.C., Chiou T.J. Regulatory network of microrna399 and ph02 by systemic signaling. Plant Physiol. 2008, 147:732-746.
40. Pourtau N., Jennings R., Pelzer E., Pallas J., Wingler A. Effect of sugar-induced senescence on gene expression and implications for the regulation of senescence in Arabidopsis. Planta 2006, 224:556-568.
41. Reddy V.S., Goud K.V., Sharma R.P., Reddy A.R. UV-B responsive anthocyanin production in a rice cultivar is associated with a specific phase of phenylalanine ammonia lyase biosynthesis. Plant Physiol. 1994, 105:1059-1066.
42. Germain V., Rylott E.L., Larson T.R., Sherson S.M., Bechtold N., Carde J.P., Bryce J.H., Graham I.A., Smith S.M. Requirement for 3-ketoacyl-CoA thiolase-2 in peroxisome development, fatty acid beta-oxidation and breakdown of triacylglycerol in lipid bodies of Arabidopsis seedlings. Plant J. 2001, 28:1-12.
43. Seki M, Narusaka M., Abe H., Kasuga M., Yamaguchi-Shinozaki K., Carninci P., Hayashizaki Y., Shinozaki K. Monitoring the expression pattern of 1300 Arabidopsis genes under drought and cold stresses by using a full-length cDNA microarray. Plant Cell 2001, 13:61-72.
44. Nagpa P., Walker L.M., Young J.C., Sonawala A., Timpte C., Estelle M., Reed J.W. AXR2 encodes a member of the Aux/IAA protein family. Plant Physiol. 2000, 123:563-574.