Cloning and characterization of TIMP-2b gene in grass carp

Comparative Biochemistry and Physiology - B Biochemistry and Molecular Biology

Volumn 159, Issue 2, 2011, Pages 115-121

  Xu, Xiao Yan ^a   Shen, Yu Bang ^a   Yang, Xiao Meng ^a   Li, Jia Le ^a  

^a SHANGHAI OCEAN UNIVERSITY   (China)

Author keywords

Expression; Grass carp; TIMP 2b

Indexed keywords

COMPLEMENTARY DNA; TISSUE INHIBITOR OF METALLOPROTEINASE 2; TISSUE INHIBITOR OF METALLOPROTEINASE 2B; UNCLASSIFIED DRUG;

AEROMONAS HYDROPHILA; ARTICLE; CARP; CONTROLLED STUDY; CTENOPHARYNGODON IDELLA; DNA SEQUENCE; MOLECULAR CLONING; NONHUMAN; NUCLEOTIDE SEQUENCE; PHYLOGENETIC TREE; PRIORITY JOURNAL; PROTEIN ANALYSIS; PROTEIN EXPRESSION; TELEOST; UPREGULATION; ZEBRA FISH;

AEROMONAS HYDROPHILA; CTENOPHARYNGODON; CTENOPHARYNGODON IDELLA; DANIO RERIO; TELEOSTEI;

EID: 79953649753     PISSN: 10964959     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.cbpb.2011.02.008     Document Type: Article

References (31)

1. Bai S., Thummel R., Godwinb A.R., Nagase H., Itohc Y., Evans LiLi R., McDermott J., Seiki M., M.P.S. Matrix metalloproteinase expression and function during fin regeneration in zebrafish: analysis of MT1-MMP, MMP2 and TIMP2. Matrix Biol. 2005, 24:247-260.
2. Baker A.H., Edwards D.R., Murphy G. Metalloproteinase inhibitors: biological actions and therapeutic opportunities. J. Cell Sci. 2002, 115:3719-3727.
3. Bendtsen J.D., Nielsen H., Heijne G.V., Brunak S. Improved prediction of signal peptides: Signalp 3.0. J. Mol. Biol. 2004, 340:783-795.
4. Boone T.C., Johnson M.J., Clerck Y.A.D., Langley K.E. cDNA cloning and expression of a metalloproteinase inhibitor related to tissue inhibitor of metalloproteinases. PNAS 1990, 87:2800-2804.
5. Brew K., Dinakarpandian D., Nagase H. Tissue inhibitors of metalloproteinases: evolution, structure and function. BBA Protein Struct. M. 2000, 1477:267-283.
6. Butler G.S., Hutton M., Wattam B.A., Williamson R.A., Uper V.K., Willenbrocki F., Murphy G. The specificity of TIMP-2 for matrix metalloproteinases can be modified by single amino acid mutations. J. Biol. Chem. 1999, 274:20391-20396.
7. Castillo-Briceno P., Arizcun-Arizcun M., Meseguer J., Mulero V., García-Ayala A. Correlated expression profile of extracellular matrix-related molecules during the inflammatory response of the teleost fish gilthead seabream. Dev. Comp. Immunol. 2010, 34:1051-1058.
8. Chopra A.K., Houston C.W., Peterson J.W., Jin G.-F. Cloning, expression, and sequence analysis of a cytolytic enterotoxin gene from Aeromonas hydrophila. Can. J. Microbiol. 1993, 39:513-523.
9. Chu W.H., Lu C.P. Cloning and sequence analysis of an extracellular serine-protease gene of Aeromonas hydrophila J-1. J. Fish. Chin. 2004, 28:84-88.
10. Douglas D.A., Shi Y.E., Sang Q.A. Computational sequence analysis of the tissue inhibitor of metalloproteinase family. J. Protein Chem. 1997, 16:237-255.
11. Greene J., Wang M., Liu Y.E., Raymond L.A., Rosen C., Shi Y.E. Molecular cloning and characterization of human tissue inhibitor of metalloproteinase 4. J. Biol. Chem. 1996, 271:30375-30380.
12. Huang Q.Y., Tang S.L., Zhang J.Y. Ichthyopathology 1983, Shanghai Press of Science & Technology, Shanghai, China.
13. Huxley-Jones J., Clarke T.-K., Beck C., Toubaris G., Robertson D.L., Boot-Handford R.P. The evolution of the vertebrate metzincins; insights from Ciona intestinalis and Danio rerio. BMC Evol. Biol. 2007, 7:20.
14. Jeanmougin F., Thompson J., Gouy M., Higgins D., Gibson T. Multiple sequence alignment with Clustal X. Trends Biochem. Sci. 1998, 403-405.
15. Kubota S., Kinoshita M., Uji S., Yokoyama Y., Yamamotod E., Hironoe I., Aoki T., Sakaguchi M., Morioka K., Itoha Y., Toyohara H. Occurrence of two distinct types of tissue inhibitor of metalloproteinases-2 in teleost fish. BBA 2003, 1629:102-108.
16. Lin T.L., Chen R.S., Dong C.P. Isolation and identification of the Aeromonas hydrophila pathogeic strains from Anguilla anguilla. Fujian J. Agric. Sci. 2001, 16:35-40.
17. Liu F., Li J.L., Yue G.H., Fu J.J., Zhou Z.F. Molecular cloning and expression analysis of the liver-expressed antimicrobial peptide 2 (LEAP-2) gene in grass carp. Vet. Immunol. Immunopathol. 2010, 133:133-143.
18. Liu F., Wang D., Fu J., Sun G., Shen Y., Dong L., Zhang B., Hu S., Li J. Identification of immune-relevant genes by expressed sequence tag analysis of head kidney from grass carp (Ctenopharyngodon idella). Comp. Biochem. Phys. D 2010, 5:116-123.
19. △△CT Method. Methods 2001, 25:402-408.
20. Meyer A., Peer Y.V.D. From 2R to 3R: evidence for a fish-specific genome duplication (FSGD). BioEssays 2005, 27:937-945.
21. Nagase H., Woessner J.F. Matrix metalloproteinases. J. Biol. Chem. 1999, 274:21491-21494.
22. Pollard D.R., Johnson W.M., Lior H., Tyler S.D., Rozee K.R. Detection of the aerolysin gene in Aeromonas hydrophila by the polymerase chain reaction. J. Clin. Microbiol. 1990, 16:2477-2481.
23. Touhata K., Tokuda Y., Yamashita M., Toyohara H. Molecular cloning and characterization of a tissue inhibitor of metalloproteinase-2 from red seabream cultured cells. Fish. Sci. 2006, 72:699-701.
24. Tsukamoto H., Yokoyam Y., Suzuki T., Mizuta S., Yoshinaka R. Expression and distribution of fugu TIMP-2s (fgTIMP-2a and fgTIMP-2b) mRNAs in tissues and embryos. Comp. Biochem. Phys. B 2007, 148:225-230.
25. Visse R., Nagase H. Matrix metalloproteinases and tissue inhibitors of metalloproteinases structure, function, and biochemistry. Circ. Res. 2003, 92:827-839.
26. Vu T.H., Werb Z. Matrix metalloproteinases: effectors of development and normal physiology. Gene Dev 2000, 14:2123-2133.
27. Williamson R.A., Marston F.A., Angal S., Kolitis P., Panico M., Morris H.R., Carne A.F., Smith B.J., Harris T.J.R., Freedman R.B. Disulphide bond assignment in human tissue inhibitor of metalloproteinases (TIMP). Biochem. J. 1990, 268:267-274.
28. Woessner J., Nagase H. Matrix metalloproteinases and TIMPs 2000, Oxford University Press, New York.
29. Xu Z.Y., Nie P., Chang M.X., Sun B.J. Cloning, characterization and expression analysis of SIMP (source of immunodominant MHC-associated peptides) in grass carp Ctenopharyngodon idella. Fish Shellfish Immunol. 2008, 24:701-714.
30. Yoshihara Y., Nakamura H., Obata K., Yamada H., Hayakawa T., Fujikawa K., Okada Y. Matrix metalloproteinases and tissue inhibitors of metalloproteinases in synovial fluids from patients with rheumatoid arthritis or osteoarthritis. Ann. Rheum. Dis. 2000, 59:455-461.
31. Zhang J., Bai S., Tanase C., Nagase H., Sarras M.P. The expression of tissue inhibitor of metalloproteinase 2 (TIMP-2) is required for normal development of zebrafish embryos. Dev. Genes Evol. 2003, 213:382-389.