Identification of Pantoea ananatis gene encoding membrane pyrroloquinoline quinone (PQQ)-dependent glucose dehydrogenase and pqqABCDEFoperon essential for PQQ biosynthesis

FEMS Microbiology Letters

Volumn 318, Issue 1, 2011, Pages 55-60

  Andreeva, Irina G ^a,b   Golubeva, Lyubov I ^a   Kuvaeva, Tatiana M ^a   Gak, Evgueni R ^a   Katashkina, Joanna I ^a   Mashko, Sergey V ^a,b  

^a Ajinomoto Genetika Research Institute   (Russian Federation)

^b MOSCOW STATE UNIVERSITY   (Russian Federation)

Author keywords

CRIM plasmid; in vivo cloning; Phosphotransferase transport system (PTS); PQQ dependent mGDH; PTS glucose+Escherichia coli strain

Indexed keywords

GLUCONIC ACID; GLUCOSE; GLUCOSE DEHYDROGENASE; PHOSPHOENOLPYRUVATE; PYRROLOQUINOLINEQUINONE;

BACTERIAL GENE; BACTERIAL GROWTH; COMPUTER ANALYSIS; CONTROLLED STUDY; ESCHERICHIA COLI; GENE IDENTIFICATION; GENE SEQUENCE; GLUCOSE INTAKE; GLUCOSE METABOLISM; GLUCOSE OXIDATION; IN VIVO STUDY; KLEBSIELLA PNEUMONIAE; LETTER; MOLECULAR CLONING; NONHUMAN; NUCLEOTIDE SEQUENCE; OPEN READING FRAME; OPERON; PANTOEA; PANTOEA ANANATIS; PRIORITY JOURNAL; SEQUENCE HOMOLOGY;

BACTERIAL PROTEINS; GLUCONATES; GLUCOSE DEHYDROGENASES; MUTATION; OPERON; PANTOEA; PQQ COFACTOR;

ESCHERICHIA COLI; KLEBSIELLA PNEUMONIAE; PANTOEA ANANATIS;

EID: 79953331941     PISSN: 03781097     EISSN: 15746968     Source Type: Journal    
DOI: 10.1111/j.1574-6968.2011.02240.x     Document Type: Letter

References (31)

1. Báez-Viveros JL, Osuna J, Hermández-Chávez G, Soberón X, Bolívar F & Gosset G (2004) Metabolic engineering and protein directed evolution increase the yield of l-phenylalanine synthesized from glucose in Escherichia coli. Biotechnol Bioeng 87: 516-524.
2. Blattner FR, Plunkett G III, Bloch CA et al. (1997) The complete genome sequence of Escherichia coli K-12. Science 277: 1453-1474.
3. Cha JS, Pujol C & Kado IC (1997) Identification and characterization of a Pantoea citrea gene encoding glucose dehydrogenase that is essential for causing pink disease of pineapple. Appl Environ Microbiol 63: 71-76.
4. Cleton-Jansen AM, Goosen N, Fayet O & van de Putte P (1990) Cloning, mapping, and sequencing of the gene encoding Escherichia coli quinoprotein glucose dehydrogenase. J Bacteriol 172: 6308-6315.
5. Deutscher J, Francke C & Postma PW (2006) How phosphotransferase system-related protein phosphorylation regulates carbohydrate metabolism in bacteria. Microbiol Mol Biol R 70: 939-1031.
6. Duine JA, Frank J & Verwiel PEJ (1980) Structure and activity of the prosthetic group of methanol dehydrogenase. Eur J Biochem 108: 187-192.
7. Flores N, Xiao J, Berry A, Bolivar F & Valle F (1996) Pathway engineering for the production of aromatic compounds in Escherichia coli. Nat Biotechnol 14: 620-623.
8. Geiger O & Gorisch H (1986) Enzymatic determination of PQQ using crude membranes from E. coli. Anal Biochem 164: 418-423.
9. Haldimann A & Wanner BL (2001) Conditional-replication, integration, excision, and retrieval plasmid-host systems for gene structure-function studies of bacteria. J Bacteriol 183: 6384-6393.
10. Hernández-Montalvo V, Martínez A, Hernández-Chavez G, Bolivar F, Valle F & Gosset G (2003) Expression of galP and glk in a Escherichia coli PTS mutant restores glucose transport and increases glycolytic flux to fermentation products. Biotechnol Bioeng 83: 687-694.
11. Herrero M, de Lorenzo V & Timmis KN (1990) Transposon vectors containing non-antibiotic resistance selection markers for cloning and stable chromosomal insertion of foreign genes in gram-negative bacteria. J Bacteriol 172: 6557-6567.
12. Izui H, Hara Y, Sato M & Akiyoshi N (2003) Method for producing l-glutamic acid. US patent application 6596517.
13. Katashkina JI, Hara Y, Golubeva LI, Andreeva IG, Kuvaeva TM & Mashko SV (2009) Use of the λred-recombineering method for genetic engineering of Pantoea ananatis. BMC Mol Biol 10: 34 DOI: DOI: 10.1186/1471-2199-10-34.
14. Kenney BF (1991) Determination of organic acids in food samples by capillary electrophoresis. J Chromatogr 546: 423-430.
15. Lessie TG & Phibbs PV Jr (1984) Alternative pathways of carbohydrate utilization in Pseudomonads. Annu Rev Microbiol 38: 359-387.
16. Matsushita K, Ohno Y, Shinagawa E, Adachi O & Ameyama M (1981) Existence of a novel prosthetic group, PQQ, in membrane-bound, electron transport chain-linked, primary dehydrogenases of oxidative bacteria. FEBS Lett 130: 179-183.
17. Matsushita K, Arents JC, Bader R, Yamada M, Adachi O & Postma PW (1997) Escherichia coli is unable to produce pyrroloquinoline quinone (PQQ). Microbiology 143: 3149-3156.
18. Meulenberg JJM, Sellink E, Loenen WAM, Riegman NH, van Kleef M & Postma PW (1990) Cloning of Klebsiella pneumoniae pqq genes and PQQ biosynthesis in Escherichia coli. FEMS Microbiol Let 71: 337-344.
19. Meulenberg JJM, Sellink E, Riegman NH & Postma PW (1992) Nucleotide sequence and structure of the Klebsiella pneunioniae pqq operon. Mol Gen Genet 232: 284-294.
20. Minaeva NI, Gak ER, Zimenkov DV, Skorokhodova AY, Biryukova IV & Mashko SV (2008) Dual-in/out strategy for genes integration into bacterial chromosome: a novel approach to step-by-step construction of plasmid-less marker-less recombinant E. coli strains with predesigned genome structure. BMC Biotechnol 8: 63 DOI: DOI: 10.1186/1472-6750-8-63.
21. Pósfai G, Koob MD, Kirkpatrick HA & Blattner FR (1997) Versatile insertion plasmids for targeted genome manipulations in bacteria: isolation, deletion, and rescue of the pathogenicity island LEE of the Escherichia coli O157:H7 genome. J Bacteriol 179: 4426-4428.
22. Pujol C & Kado IC (2000) Genetic and biochemical characterization of the pathway in Pantoea citrea leading to pink disease of pineapple. J Bacteriol 182: 2230-2237.
23. Rose RE (1988) The nucleotide sequence of pACYC184. Nucleic Acids Res 16: 35.
24. Salisbury SA, Forrest HS, Cruse WBT & Kennard O (1979) A novel coenzyme from bacterial primary alcohol dehydrogenases. Nature 280: 843-844.
25. Sambrook J & Russell DW (2001) Molecular Cloning: A Laboratory Manual. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY.
26. Sode K, Ito K, Witarto AB, Watanabe K, Yoshida H & Postma P (1996) Increased production of recombinant pyrroloquinoline quinine (PQQ) glucose dehydrogenase by metabolically engineered Escherichia coli strain capable of PQQ biosynthesis. J Biotechnol 49: 239-243.
27. Sulbarán M, Pérez E, Ball MM, Bahsas A & Yarzábal LA (2009) Characterization of the mineral phosphate-solubilizing activity of Pantoea agglomerans MMB051 isolated from an iron-rich soil in Southeastern Venezuela (Bolivar State). Curr Microbiol 58: 378-383.
28. Thomason LC, Court DL, Datta AR, Khanna R & Rosner JL (2004) Identification of the Escherichia coli K-12 ybhE gene as pgl, encoding 6-phosphogluconolactonase. J Bacteriol 186: 8248-8253.
29. Velterop JS, Sellink E, Meulenberg JJM, David S, Bulder I & Postma PW (1995) Synthesis of pyrroloquinoline quinone in vivo and in vitro and detection of an intermediate in the biosynthetic pathway. J Bacteriol 177: 5088-5098.
30. Yamada M, Elias MD, Matsushita K, Migita CT & Adachi O (2003) Escherichia coli PQQ-containing quinoprotein glucose dehydrogenase: its structure comparison with other quinoproteins. Biochim Biophys Acta 1647: 185-192.
31. Zimenkov D, Gulevich A, Skorokhodova A, Biriukova I, Kozlov Y & Mashko S (2005) Escherichia coli ORF ybhE is pgl gene encoding 6-phosphogluconolactonase (EC 3.1.1.31) that has no homology with known 6PGLs from other organisms. FEMS Microbiol Lett 244: 275-280.