Dependency and precision of the refocusing criterion based on amplitude analysis in digital holographic microscopy

Optics Express

Volumn 19, Issue 7, 2011, Pages 6684-6698

  El Mallahi, Ahmed ^a   Dubois, Frank ^a  

^a UNIVERSITÉ LIBRE DE BRUXELLES   (Belgium)

Author keywords

[No Author keywords available]

Indexed keywords

AMPLITUDE ANALYSIS; DEFOCUS DISTANCE; DIGITAL HOLOGRAPHIC MICROSCOPY; NUMERICAL APERTURE; THEORETICAL PREDICTION;

ALGORITHM; ARTICLE; COMPUTER ASSISTED DIAGNOSIS; HOLOGRAPHY; IMAGE ENHANCEMENT; METHODOLOGY; MICROSCOPY; REPRODUCIBILITY; SENSITIVITY AND SPECIFICITY; SIGNAL PROCESSING; THREE DIMENSIONAL IMAGING;

ALGORITHMS; HOLOGRAPHY; IMAGE ENHANCEMENT; IMAGE INTERPRETATION, COMPUTER-ASSISTED; IMAGING, THREE-DIMENSIONAL; MICROSCOPY; REPRODUCIBILITY OF RESULTS; SENSITIVITY AND SPECIFICITY; SIGNAL PROCESSING, COMPUTER-ASSISTED;

EID: 79953186073     PISSN: None     EISSN: 10944087     Source Type: Journal    
DOI: 10.1364/OE.19.006684     Document Type: Article

References (34)

1. F. Dubois, M.-L. Novella Requena, C. Minetti, O. Monnom and E. Istasse, "Partial spatial coherence effects in digital holographic microscopy with a laser source," Appl. Opt. 43, 1131-1139 (2004).
2. F. Dubois, L. Johannes, and J-C. Legros, "Improved three-dimensional imaging with a digital holography microscope with a source of partial spatial coherence," Appl. Opt. 38, 7085-7094 (1999). (Pubitemid 129646723)
3. T. Zhang and I. Yamaguchi, "Three-dimensional microscopy with phase-shifting digital holography," Opt. Lett. 23, 1221-1223 (1998). (Pubitemid 128597713)
4. U. Schnars andW. Jptner, "Direct recording of holograms by a CCD target and numerical reconstruction," Appl. Opt. 33, 179-181 (1994).
5. U. Schnars and W. Jptner, "Digital recording and numerical reconstruction of holograms," Meas. Sci. Technol. 13, 85-101 (2002).
6. G. Popescu, L. P. Deflores, J. C. Vaughan, K. Badizadegan, H. Iwai, R. R. Dasari, and M. S. Feld, "Fourier phase microscopy for investigation of biological structures and dynamics," Opt. Lett. 29, 2503-2505 (2004).
7. J. Garcia-Sucerquia, W. Xu, S. K. Jericho, P. Klages, M. H. Jericho, and H. J. Kreuzer, "Digital in-line holographic microscopy," Appl. Opt. 45, 836-850 (2006).
8. L. Yu, S. Mohanty, J. Zhang, S. Genc, M. K. Kim, M. W. Berns, and Z. Chen, "Digital holographic microscopy for quantitative cell dynamic evaluation during laser microsurgery," Appl. Opt. 17, 12031-12038 (2009).
9. M. Seesta and M. Gustafsson, "Object characterization with refractometric digital Fourier holography," Opt. Lett. 30, 471-473 (2005). (Pubitemid 40339484)
10. M. Gustafsson and M. Sebesta, "Refractometry of Microscopic Objects with Digital Holography," Appl. Opt. 43, 4796-4801 (2005).
11. D. Carl, B. Kemper, G. Wernicke, and G. von Bally, "Parameter- optimized digital holographic microscope for high-resolution living-cell analysis," Appl. Opt. 43, 6536-6544 (2004). (Pubitemid 40120770)
12. N. Warnasooriya, F. Joud, P. Bun, G. Tessier, M. Coppey-Moisan, P. Desbiolles, M. Atlan, M. Abboud, and M. Gross, "Imaging gold nanoparticles in living cell environments using heterodyne digital holographic microscopy," Opt. Express 18, 3264-3273 (2010).
13. D. Lebrun, A. Benkouider, S. Cotmellec, and M. Malek, "Particle field digital holographic reconstruction in arbitrary tilted planes," Opt. Express 11, 224-229 (2003).
14. N. Pandey and B. Hennelly, "Fixed-point numerical-reconstruction for digital holographic microscopy," Opt. Lett. 35, 1076-1078 (2010).
15. C. Minetti, N. Callens, G. Coupier, T. Podgorski, and F. Dubois, "Fast measurements of concentration profiles inside deformable objects in microflows with spatial coherence digital holography," Appl. Opt. 45, 5305-5314 (2008).
16. F. Dubois, O. Monnom, C. Yourassowski, and J.-C. Legros, "Pattern recognition with digital holographic microscope working in partially coherent illumination," Appl. Opt. 41, 4108-4119 (2002). (Pubitemid 34878904)
17. B. Javidi, I. Moon, S. Yeom, and E. Carapezza, "Three-dimensional imaging and recognition of microorganism using single-exposure on-line (SEOL) digital holography," Opt. Express 13, 4492-4506 (2005). (Pubitemid 41029370)
18. P. Ferraro, S. De Nicola, G. Coppola, A. Finizio, D. Alfieri, and G. Pierattini, "Controlling image size as a function of distance and wavelength in Fresnel-transform reconstruction of digital hologram," Opt. Lett. 29, 854-856 (2004).
19. E. Cuche, F. Bevilacqua, and C. Depeursinge, "Digital holography for quantitative phase contrast imaging," Opt. Lett. 24, 291-293 (1999). (Pubitemid 129571880)
20. F. Charrire, A. Marian, F. Montford, J. Kuehn, T. Colomb, E. Cuche, P. Marquet, and C. Depeursinge, "Cell refractive index tomography by digital holographic microscopy," Opt. Lett. 31, 178-180 (2006).
21. F. Dubois, O. Monnom, C. Yourassowski, and J.-C. Legros, "Border processing in digital holography by extension of the digital hologram and reduction of the higher spatial frequencies," Appl. Opt. 41, 2621-2626 (2002). (Pubitemid 34725804)
22. T. Colomb, E. Cuche, F. Charrire, J. Khn, N. Aspert, F. Monfort, P. Marquet, and C. Despeursinge, "Automatic procedure for aberration compensation in digital holographic microscopy and applications to specimen shape compensation," Appl. Opt. 45, 851-863 (2006).
23. L. Yu and L. Cai, "Iterative algorithm with a constraint condition for numerical reconstruction of a threedimensional object from its hologram," J. Opt. Soc. Am. A 18, 1033-1045 (2001).
24. J. Gillespie and R. A. King, "The use of self-entropy as a focus measure in digital holography," Pattern Recogn. Lett. 9, 19-25 (1989).
25. L. Ma, H. Wang, Y. Li, and H. Jin, "Numerical reconstruction of digital holograms for three-dimensional shape measurement," J. Opt. A 6, 396-400 (2004).
26. P. Ferraro, G. Coppola, S. De Nicola, A. Finizio, and G. Pierattini, "Digital holographic microscope with automatic focus tracking by detecting sample displacement in real time," Opt. Lett. 28, 1257-1259 (2003).
27. Y. J. Choo and B. S. Kang, "The characteristics of the particle position along an optical axis in particle holography," Meas. Sci. Technol. 17, 761-770 (2006).
28. Y. Yang, B. S. Kang, and Y. J. Choo, "Application of the correlation coefficient method for determination of the focus plane to digital particle holography," Appl. Opt. 47, 817-824 (2008). (Pubitemid 351649207)
29. M. Liebling and M. Unser, "Autofocus for digital Fresnel holograms by use of a Fresnelet-sparsity criterion," J. Opt. Soc. Am. A 21, 2424-2430 (2004). (Pubitemid 40009340)
30. P. Langehanenberg, B. Kemper, D. Dirksen, and G. von Bally, "Autofocusing in digital holographic phase contrast microscopy on pure phase objects for live cell imaging," Appl. Opt. 47, 176-182 (2008).
31. F. Dubois, C. Schockaert, N. Callens, and C. Yourassowski, "Focus plane detection criteria in digital holography microscopy by amplitude analysis," Opt. Express 14, 5895-5908 (2006).
32. M. Antkowiak, N. Callens, C. Yourassowski, and F. Dubois, "Extended focused imaging of a microparticle field with digital holographic microscopy," Opt. Lett. 33, 1626-1628 (2008).
33. W. Li, N. C. Loomis, Q. Hu, and C. S. Davis, "Focus detection from digital in-line holograms based on spectral l1 norms," J. Opt. Soc. Am. A 24, 3054-3062 (2007). (Pubitemid 350238767)
34. M. Nazarathy and J. Shamir, "Fourier optics described by operator," J. Opt. Soc. Am. 70, 150-159 (1980).