Rapid diagnostic tests as a source of DNA for Plasmodium species-specific real-time PCR

Malaria Journal

Volumn 10, Issue , 2011, Pages

  Cnops, Lieselotte ^a   Boderie, Merel ^b   Gillet, Philippe ^a   Van Esbroeck, Marjan ^a   Jacobs, Jan ^a,b  

^a INSTITUTE OF TROPICAL MEDICINE   (Belgium)

^b MAASTRICHT UNIVERSITY   (Netherlands)

Author keywords

[No Author keywords available]

Indexed keywords

PROTOZOAL DNA; PYROXYLIN; RNA 18S; PROTOZOAL RNA; RIBOSOME DNA;

ARTICLE; BLOOD SAMPLING; CONTROLLED STUDY; DIAGNOSTIC KIT; DIAGNOSTIC TEST; DNA EXTRACTION; DNA ISOLATION; GAMETOCYTE; GENE AMPLIFICATION; HUMAN; MIXED INFECTION; NONHUMAN; OPTIMAL RAPID MALARIA TEST; PAN TEST; PARASITE IDENTIFICATION; PLASMODIUM FALCIPARUM; PLASMODIUM MALARIAE; PLASMODIUM OVALE; PLASMODIUM VIVAX; REAL TIME POLYMERASE CHAIN REACTION; ANIMAL; CLASSIFICATION; DIAGNOSIS, MEASUREMENT AND ANALYSIS; GENETICS; ISOLATION AND PURIFICATION; MALARIA; METHODOLOGY; PARASITOLOGY; PLASMODIUM; POLYMERASE CHAIN REACTION;

ANIMALS; CLINICAL LABORATORY TECHNIQUES; DIAGNOSTIC TESTS, ROUTINE; DNA, PROTOZOAN; DNA, RIBOSOMAL; HUMANS; MALARIA; PARASITOLOGY; PLASMODIUM; POLYMERASE CHAIN REACTION; RNA, PROTOZOAN; RNA, RIBOSOMAL, 18S;

EID: 79953098292     PISSN: None     EISSN: 14752875     Source Type: Journal    
DOI: 10.1186/1475-2875-10-67     Document Type: Article

References (38)

1. A review of malaria diagnostic tools: microscopy and rapid diagnostic test (RDT). C Wongsrichanalai MJ Barcus S Muth A Sutamihardja WH Wernsdorfer, Am J Trop Med Hyg 2007 77 119 127 18165483
2. Bedside diagnosis of imported malaria using the Binax Now malaria antigen detection test. L Wiese B Bruun L Baek A Friis-Møller B Gahrn-Hansen J Hansen O Heltberg T Højbjerg MK Hornstrup B Kvinesdal G Gomme JA Kurtzhals, Scand J Infect Dis 2006 38 1063 1068 10.1080/00365540600818011 17148078 (Pubitemid 44869281)
3. Use of rapid diagnostic tests for diagnosis of malaria in the UK. D Chilton AN Malik M Armstrong M Kettelhut J Parker-Williams PL Chiodini, J Clin Pathol 2006 59 862 866 10.1136/jcp.2005.032904 16603648 (Pubitemid 44211750)
4. Informed decision-making before changing to RDT: a comparison of microscopy, rapid diagnostic test and molecular techniques for diagnosis and identification of malaria parasites in Kassala, eastern Sudan. MMM Osman BYM Nour MF Sedig L de Bes AM babikir AA Mohamedani PF Mens, Trop Med Int Health 2010 15 1442 1448 10.1111/j.1365-3156.2010.02659.x 20973878
5. World Health Organization, World Malaria Report 2009 Geneva 2009
6. World Health Organization, Malaria Rapid Diagnostic Test Performance; Results of WHO product testing of malaria RDTs: Round 1 (2008) 2009 http://www.finddiagnostics.org/resource-centre/reports-brochures/ malaria-diagnostics-report-2009.html
7. World Health Organization, Malaria Rapid Diagnostic Test Performance; Results of WHO product testing of malaria RDTs: Round 2 (2009) 2010 http://www.finddiagnostics.org/resource-centre/reports-brochures/ malaria-diagnostic-test-report-round2.html
8. Ensuring quality and access for malaria diagnosis: how can it be achieved? D Bell C Wongsrichanalai JW Barnwell, Nat Rev Microbiol 2006 4 682 695 10.1038/nrmicro1474 16912713
9. Validation of a four-primer real-time PCR as a diagnostic tool for single and mixed Plasmodium infections. L Cnops J Jacobs M Van Esbroeck, Clin Microbiol Inf 2010
10. Giemsa-stained thick blood films as a source of DNA for Plasmodium species-specific real-time PCR. L Cnops M Van Esbroeck E Bottieau J Jacobs, Malar J 2010 9 370 10.1186/1475-2875-9-370 21176207
11. Test characteristics of two rapid antigen detection tests (SD FK50 and SD FK60) for the diagnosis of malaria in returned travellers. M Van der Palen P Gillet E Bottieau L Cnops M Van Esbroeck J Jacobs, Malar J 2009 8 90 10.1186/1475-2875-8-90 19416497
12. External quality assessment on the use of malaria rapid diagnostic tests in a non-endemic setting. P Gillet P Mukadi K Vernelen M Van Esbroeck JJ Muyembe C Bruggeman J Jacobs, Malar J 2010 13 359 10.1186/1475-2875-9-359
13. World Health Oragnization, List of known commercially-available antigen-detecting malaria RDTs information for national public health services and UN Agencies wishing to procure RDTs 2009
14. Leishmania identification by PCR of Giemsa-stained lesion imprint slides stored for up to 36 years. AC Volpini MJ Marques S Lopes dos Santos GL Machado-Coelho W Mayrink AJ Romantha, Clin Microbiol Inf 2006 12 815 818
15. Recovery and use of Plasmodium DNA from malaria rapid diagnostic tests. V Veron B Carme, Am J Trop Med Hyg 2006 74 941 943 16760500 (Pubitemid 351627396)
16. Using rapid diagnostic tests as source of malaria parasite DNA for molecular analyses in the era of declining malaria prevalence. DS Ishengoma S Lwitiho RA Madebe N Nyadonde O Persson LS Vestergaard IC Bygbjerg MM Lemnge M Alifrangis, Malar J 2011 10 6 10.1186/1475-2875-10-6 21226910
17. Southern blotting. T Brown, Curr Protoc Immunol 2001 Chapter 10
18. Quantitative DNA slot blot analysis: inhibition of DNA binding to membranes by magnesium ions. DM Kube A Srivastava, Nucleic Acids Res 1997 25 3375 3376 10.1093/nar/25.16.3375 9241256 (Pubitemid 27338702)
19. Low sensitivity of nested PCR using Plasmodium DNA extracted from stained thick blood smears: an epidemiological retrospective study among subjects with low parasitaemia in an endemic area of the Brazilian Amazon region. KKG Scolpel CJF Fontes AC Nunes MdF Horta EM Braga, Malar J 2004 3 8 10.1186/1475-2875-3-8 15056392
20. Diagnostic PCR: validation and sample preparation are two sides of the same coin. J Hoorfar P Wolffs P Rådström, APMIS 2004 112 808 184 10.1111/j.1600-0463.2004.apm11211-1207.x 15688523
21. Fundamentals of quality assessment of molecular amplification methods in clinical diagnostics. International Federation of Clinical Chemistry Scientific Division Committee on Molecular Biology Techniques. M Neumaier A Braun C Wagener, Clin Chem 1998 44 12 26 9550553
22. Advances in real-time PCR: applications to clinical laboratory diagnostics. B Kaltenboeck C Wang, Adv Clin Chemistry 2005 40 219 259 full-text (Pubitemid 43588725)
23. DNA cards: determinants of DNA yield and quality in collecting genetic samples for pharmacogenetic studies. S Mas A Crescenti P Gassá JM Vidal-Taboada A Lafuente, Basic Clin Pharmacol Toxicol 2007 101 132 137 10.1111/j.1742-7843.2007.00089.x 17651316 (Pubitemid 47094305)
24. How useful is PCR in the diagnosis of malaria. T Hanscheid MP Grobusch, Trends Parasitol 2002 18 395 398 10.1016/S1471-4922(02)02348-6 12377256
25. Rapid diagnostic tests for malaria parasites. A Moody, Clin Microbiol Rev 2002 15 66 78 10.1128/CMR.15.1.66-78.2002 11781267 (Pubitemid 34052582)
26. Update on rapid diagnostic testing for malaria. CK Murray RA Gasser AJ Magill RS Miller, Clin Microbiol Rev 2008 21 97 110 10.1128/CMR.00035-07 18202438 (Pubitemid 351160011)
27. Amplification by polymerase chain reaction of Plasmodium falciparum DNA from Giemsa-stained thin blood smears. M Kimura O Kaneko A Inoue A Ishii K Tanabe, Mol Biochem Parasitol 1995 70 193 197 10.1016/0166-6851(95)00006-M 7637702
28. DNA amplification of Plasmodium vivax parasites from Giemsa-stained blood smears. FZ Xiao SY Zhang LS Xu JH Huang HG Xie YR Ou, Chin J Parasitol Para Dis 2006 24 290 292
29. Determination of genetic variation within Plasmodium falciparum by using enzymatically amplified DNA from filter paper disks impregnated with whole blood. KC Kain DE Lanar, J Clin Microbiol 1991 29 1171 1174 1864936
30. A genus- and species-specific nested polymerase chain reaction malaria detection assay for epidemiologic studies. B Singh A Bobogare J Cox-Singh G Snounou MS Abdullah HA Rahman, Am J Trop Med Hyg 1999 60 687 692 10348249 (Pubitemid 29233131)
31. Evaluation of areal-time polymerase chain reaction assay for the diagnosis of malaria in patients from Thailand. H Swan L Sloan A Muyombwe P Chavalitshewinkoon-Petmitr S Krudsood W Leowattana P Wilairatana S Looareesuwan J Rosenblatt, Am J Trop Med Hyg 2005 73 850 854 16282292 (Pubitemid 41688457)
32. The heat stability of Plasmodium lactate dehydrogenase-based and histidine-rich protein 2-based malaria rapid diagnostic tests. PL Chiodini K Bowers P Jorgensen JW Barnwell KK Grady J Luchavez AH Moody A Cenizal D Bell, Trans R Soc Trop Med Hyg 2007 101 331 337 10.1016/j.trstmh.2006.09.007 17212967 (Pubitemid 46205898)
33. Making malaria testing relevant: beyond test purchase. D Bell MD Perkins, Trans R Soc Trop Med Hyg 2008 102 1064 1066 10.1016/j.trstmh.2008.05.007 18586290
34. Out with the old, in with the new: the utility of rapid diagnostic tests for malaria diagnosis in Africa. C Drakeley H Reyburn, Trans R Soc Trop Med Hyg 2009 103 333 337 10.1016/j.trstmh.2008.10.003 19019399
35. Performance of malaria rapid diagnostic tests as part of routine malaria case management in Kenya. AM de Oliveira J Skarbinski PO Ouma S Kariuki JW Barnwell K Otieno P Onyona LM Causer KF Laserson WS Akhwale L Slutsker M Hamel, Am J Trop Med Hyg 2009 80 470 474 19270300
36. Challenges in routine implementation and quality control of rapid diagnostic tests for malaria - Rufiji District, Tanzania. ML McMorrow MI Masanja SM Abdulla E Kahigwa SP Kachur, Am J Trop Med Hyg 2008 79 385 390 18784230
37. Comparative field performance and adherence to test results of four malaria rapid diagnostic tests among febrile patients more than five years of age in Blantyre, Malawi. J Chinkhumba J Skarbinski B Chilima C Campbell V Ewing M San Joaquin J Sande D Ali D Mathanga, Malar J 2010 9 209 20646312
38. Multiplexed real-time PCR assay for discrimination of Plasmodium species with improved sensitivity for mixed infections. SE Shokoples M Ndao K Kowalewska-Grochowska SK Yanow, J Clin Microbiol 2009 47 975 980 10.1128/JCM.01858-08 19244467