메뉴 건너뛰기




Volumn 54, Issue 3, 2011, Pages 222-234

Structure and molecular evolution of the ribosomal DNA external transcribed spacer in the cockroach genus Blattella

Author keywords

Birth and death model; Blattella; Cockroach; Concerted evolution; Multigene families; Ribosomal DNA; Saltational evolution

Indexed keywords

PRIMER DNA; RIBOSOMAL SPACER DNA;

EID: 79952958401     PISSN: 08312796     EISSN: None     Source Type: Journal    
DOI: 10.1139/G10-112     Document Type: Article
Times cited : (7)

References (44)
  • 1
    • 0003016687 scopus 로고
    • Concerted evolution of multigene families
    • Edited by M. Nei and R.K. Koehn. Sinauer Associates, Sunderland, Mass
    • Arnheim, N. 1983. Concerted evolution of multigene families. In Evolution of genes and proteins. Edited by M. Nei and R.K. Koehn. Sinauer Associates, Sunderland, Mass. pp. 38-61.
    • (1983) Evolution of Genes and Proteins , pp. 38-61
    • Arnheim, N.1
  • 2
    • 0030961555 scopus 로고    scopus 로고
    • Segmented gene conversion as a mechanism of correction of 18S rRNA pseudogene located outside of rDNA cluster in D. melanogaster
    • DOI 10.1007/PL00006188
    • Benevolenskaya, E.V., Kogan, G.L., Tulin, A.V., Philipp, D., and Gvozdev, V.A. 1997. Segmented gene conversion as a mechanism of correction of 18S rRNA pseudogene located outside of rDNA cluster in D. melanogaster. J. Mol. Evol. 44 (6): 646-651. 10.1007/PL00006188 9169557 (Pubitemid 27240858)
    • (1997) Journal of Molecular Evolution , vol.44 , Issue.6 , pp. 646-651
    • Benevolenskaya, E.V.1    Kogan, G.L.2    Tulin, A.V.3    Philipp, D.4    Gvozdev, V.A.5
  • 3
    • 0031135337 scopus 로고    scopus 로고
    • Recombinant DNA sequences generated by PCR amplification
    • 9159937
    • Bradley, R.D., and Hillis, D.M. 1997. Recombinant DNA sequences generated by PCR amplification. Mol. Biol. Evol. 14 (5): 592-593. 9159937
    • (1997) Mol. Biol. Evol. , vol.14 , Issue.5 , pp. 592-593
    • Bradley, R.D.1    Hillis, D.M.2
  • 4
    • 0015505278 scopus 로고
    • A comparison of the ribosomal DNAs of Xenopus laevis and Xenopus mulleri: The evolution of tandem genes
    • 10.1016/0022-2836(72)90521-9 5016971
    • Brown, D.D., Wensink, P.C., and Jordan, E. 1972. A comparison of the ribosomal DNAs of Xenopus laevis and Xenopus mulleri: the evolution of tandem genes. J. Mol. Biol. 63 (1): 57-73. 10.1016/0022-2836(72)90521-9 5016971
    • (1972) J. Mol. Biol. , vol.63 , Issue.1 , pp. 57-73
    • Brown, D.D.1    Wensink, P.C.2    Jordan, E.3
  • 5
    • 0029955186 scopus 로고    scopus 로고
    • Evidence that two types of 18S rDNA coexist in the genome of Dugesia (Schmidtea) mediterranea (Platyhelminthes, Turbellaria, Tricladida)
    • Carranza, S., Giribet, G., Ribera, C., Bagu, J., and Riutort, M. 1996. Evidence that two types of 18S rDNA coexist in the genome of Dugesia (Schmidtea) mediterranea (Platyhelminthes, Turbellaria, Tricladida). Mol. Biol. Evol. 13 (6): 824-832. 8754218 (Pubitemid 26240087)
    • (1996) Molecular Biology and Evolution , vol.13 , Issue.6 , pp. 824-832
    • Carranza, S.1    Giribet, G.2    Ribera, C.3    Baguna, J.4    Riutort, M.5
  • 6
    • 0032783287 scopus 로고    scopus 로고
    • Origin and evolution of paralogous rRNA gene clusters within the flatworm family Dugesiidae (Platyhelminthes, Tricladida)
    • DOI 10.1007/PL00006547
    • Carranza, S., Bagu, J., and Riutort, M. 1999. Origin and evolution of paralogous rRNA gene clusters within the flatworm family Dugesiidae (Platyhelminthes, Tricladida). J. Mol. Evol. 49 (2): 250-259. 10.1007/PL00006547 10441676 (Pubitemid 29357867)
    • (1999) Journal of Molecular Evolution , vol.49 , Issue.2 , pp. 250-259
    • Carranza, S.1    Baguna, J.2    Riutort, M.3
  • 7
    • 0020478245 scopus 로고
    • Molecular drive: A cohesive mode of species evolution
    • 10.1038/299111a0 7110332
    • Dover, G. 1982. Molecular drive: a cohesive mode of species evolution. Nature, 299 (5879): 111-117. 10.1038/299111a0 7110332
    • (1982) Nature , vol.299 , Issue.5879 , pp. 111-117
    • Dover, G.1
  • 8
    • 0019859331 scopus 로고
    • Springcleaning ribosomal DNA: A model for multigene evolution?
    • DOI 10.1038/290731a0
    • Dover, G., and Coen, E. 1981. Springcleaning ribosomal DNA: a model for multigene evolution? Nature, 290 (5809): 731-732. 10.1038/290731a0 6783965 (Pubitemid 11068037)
    • (1981) Nature , vol.290 , Issue.5809 , pp. 731-732
    • Dover, G.1    Coen, E.2
  • 9
    • 34247899003 scopus 로고    scopus 로고
    • Finely orchestrated movements: Evolution of the ribosomal RNA genes
    • DOI 10.1534/genetics.107.071399
    • Eickbush, T.H., and Eickbush, D.G. 2007. Finely orchestrated movements: evolution of the ribosomal RNA genes. Genetics, 175 (2): 477-485. 10.1534/genetics.107.071399 17322354 (Pubitemid 46798252)
    • (2007) Genetics , vol.175 , Issue.2 , pp. 477-485
    • Eickbush, T.H.1    Eickbush, D.G.2
  • 10
    • 70349530494 scopus 로고    scopus 로고
    • Long-term evolution of histone families: Old notions and new insights into their diversification mechanisms across eukaryotes
    • Edited by P. Pontarotti. Springer-Verlag, Berlin Heidelberg
    • Eirn-Lpez, J.M., Gonzlez-Romero, R., Dryhurst, D., Méndez, J., and Ausi, J. 2009. Long-term evolution of histone families: old notions and new insights into their diversification mechanisms across eukaryotes. In Evolutionary biology: concept, modeling, and application. Edited by P. Pontarotti. Springer-Verlag, Berlin Heidelberg. pp. 139-162.
    • (2009) Evolutionary Biology: Concept, Modeling, and Application , pp. 139-162
    • Eirn-Lpez, J.M.1
  • 11
    • 0024210544 scopus 로고
    • Magnification: Gene amplification by an inducible system of sister chromatid exchange
    • DOI 10.1016/0168-9525(88)90055-8
    • Endow, S.A., and Atwood, K.C. 1988. Magnification: gene amplification by an inducible system of sister chromatid exchange. Trends Genet. 4 (12): 348-351. 10.1016/0168-9525(88)90055-8 3149055 (Pubitemid 19008126)
    • (1988) Trends in Genetics , vol.4 , Issue.12 , pp. 348-351
    • Endow, S.A.1    Atwood, K.C.2
  • 12
    • 77954424999 scopus 로고    scopus 로고
    • Evolutionary dynamics of the 5S rDNA gene family in the mussel Mytilus: Mixed effects of birth-and-death and concerted evolution
    • 10.1007/s00239-010-9341-3 20386892
    • Freire, R., Arias, A., Insua, A.M., Méndez, J., and Eirn-Lpez, J.M. 2010. Evolutionary dynamics of the 5S rDNA gene family in the mussel Mytilus: mixed effects of birth-and-death and concerted evolution. J. Mol. Evol. 70 (5): 413-426. 10.1007/s00239-010-9341-3 20386892
    • (2010) J. Mol. Evol. , vol.70 , Issue.5 , pp. 413-426
    • Freire, R.1    Arias, A.2    Insua, A.M.3    Méndez, J.4    Eirn-Lpez, J.M.5
  • 13
    • 65449165260 scopus 로고    scopus 로고
    • Molecular organization of 5S rDNA in bitterlings (Cyprinidae)
    • 10.1007/s10709-008-9294-2 18648989
    • Fujiwara, M., Inafuku, J., Takeda, A., Watanabe, A., Fujiwara, A., Kohno, S., and Kubota, S. 2009. Molecular organization of 5S rDNA in bitterlings (Cyprinidae). Genetica, 135 (3): 355-365. 10.1007/s10709-008-9294-2 18648989
    • (2009) Genetica , vol.135 , Issue.3 , pp. 355-365
    • Fujiwara, M.1    Inafuku, J.2    Takeda, A.3    Watanabe, A.4    Fujiwara, A.5    Kohno, S.6    Kubota, S.7
  • 14
    • 0003026069 scopus 로고
    • Evolution of ribosomal DNA
    • Edited by R.J. MacIntyre. Plenum Press, New York
    • Gerbi, S.A. 1985. Evolution of ribosomal DNA. In Molecular evolutionary genetics. Edited by R.J. MacIntyre. Plenum Press, New York. pp. 419-517.
    • (1985) Molecular Evolutionary Genetics , pp. 419-517
    • Gerbi, S.A.1
  • 15
    • 0032982977 scopus 로고    scopus 로고
    • A ribosomal orphon sequence from Xenopus laevis flanked by novel low copy number repetitive elements
    • Guimond, A., and Moss, T. 1999. A ribosomal orphon sequence from Xenopus laevis flanked by novel low copy number repetitive elements. Biol. Chem. 380 (2): 167-174. 10.1515/BC.1999.025 10195424 (Pubitemid 29118839)
    • (1999) Biological Chemistry , vol.380 , Issue.2 , pp. 167-174
    • Guimond, A.1    Moss, T.2
  • 17
    • 0014883666 scopus 로고
    • On the inheritance of rDNA of magnified bobbed loci in D. melanogaster
    • 5519651
    • Henderson, A., and Ritossa, F. 1970. On the inheritance of rDNA of magnified bobbed loci in D. melanogaster. Genetics, 66 (3): 463-473. 5519651
    • (1970) Genetics , vol.66 , Issue.3 , pp. 463-473
    • Henderson, A.1    Ritossa, F.2
  • 18
    • 76249101086 scopus 로고    scopus 로고
    • Abundance of ribosomal RNA gene copies maintains genome integrity
    • 10.1126/science.1179044 20133573
    • Ide, S., Miyazaki, T., Maki, H., and Kobayashi, T. 2010. Abundance of ribosomal RNA gene copies maintains genome integrity. Science, 327 (5966): 693-696. 10.1126/science.1179044 20133573
    • (2010) Science , vol.327 , Issue.5966 , pp. 693-696
    • Ide, S.1    Miyazaki, T.2    Maki, H.3    Kobayashi, T.4
  • 19
    • 0027953352 scopus 로고
    • Magnification in Drosophila: Evidence for an inducible rDNA-specific recombination system
    • Komma, D.J., and Atwood, K.C. 1994. Magnification in Drosophila: evidence for an inducible rDNA-specific recombination system. Mol. Gen. Genet. 242 (3): 321-326. 10.1007/BF00280422 8107680 (Pubitemid 24061213)
    • (1994) Molecular and General Genetics , vol.242 , Issue.3 , pp. 321-326
    • Komma, D.J.1    Atwood, K.C.2
  • 20
    • 0347989440 scopus 로고    scopus 로고
    • PCR-generated artificial ribosomal DNAs from premature termination at Alu sequences
    • DOI 10.1016/S1389-0344(03)00004-2
    • Kupriyanova, N.S., Shibalev, D.V., Voronov, A.S., and Ryskov, A.P. 2004. PCR-generated artificial ribosomal DNAs from premature termination at Alu sequences. Biomol. Eng. 21 (1): 21-25. 10.1016/S1389-0344(03)00004-2 14715316 (Pubitemid 38049997)
    • (2004) Biomolecular Engineering , vol.21 , Issue.1 , pp. 21-25
    • Kupriyanova, N.S.1    Shibalev, D.V.2    Voronov, A.S.3    Ryskov, A.P.4
  • 21
    • 79952912549 scopus 로고    scopus 로고
    • Molecular evolution
    • Sunderland, Mass
    • Li, W.H. 1997. Molecular evolution. Sinauer Associates, Sunderland, Mass.
    • (1997) Sinauer Associates
    • Li, W.H.1
  • 22
    • 0029170117 scopus 로고
    • Promotion and regulation of ribosomal transcription in eukaryotes by RNA polymerase
    • 7754036
    • Moss, T., and Stefanovsky, V.Y. 1995. Promotion and regulation of ribosomal transcription in eukaryotes by RNA polymerase. Prog. Nucleic Acid Res. Mol. Biol. 50: 25-66. 7754036
    • (1995) Prog. Nucleic Acid Res. Mol. Biol. , vol.50 , pp. 25-66
    • Moss, T.1    Stefanovsky, V.Y.2
  • 23
    • 0029551487 scopus 로고
    • Detection and analysis of Tetrahymena pyriformis 26S ribosomal DNA domain sequences, differing in degree of evolutionary conservation., 8552057
    • Mukha, D.V., and Sidorenko, A.P. 1995. Detection and analysis of Tetrahymena pyriformis 26S ribosomal DNA domain sequences, differing in degree of evolutionary conservation. Mol. Biol. (Mosk.), 29 (3): 529-537. 8552057
    • (1995) Mol. Biol. (Mosk.) , vol.29 , Issue.3 , pp. 529-537
    • Mukha, D.V.1    Sidorenko, A.P.2
  • 24
    • 1842587518 scopus 로고    scopus 로고
    • Identification of highly conservative domains within the 17s ribosomal dna sequence from tetrahymena pyriformis
    • Mukha, D.V., and Sidorenko, A.P. 1996. Identifcation of high conservative domains within the 17S ribosomal DNA sequence from Tetrahymena pyriformis. Genetika, 32 (11): 1494-1497. [In Russian.] 9119210 (Pubitemid 126763389)
    • (1996) Genetika , vol.32 , Issue.11 , pp. 1494-1497
    • Mukha, D.V.1    Sidorenko, A.P.2
  • 25
    • 0036712393 scopus 로고    scopus 로고
    • Evolution and phylogenetic information content of the ribosomal DNA repeat unit in the Blattodea (Insecta)
    • DOI 10.1016/S0965-1748(01)00164-3, PII S0965174801001643
    • Mukha, D., Wiegmann, B.M., and Schal, C. 2002. Evolution and phylogenetic information content of the ribosomal DNA repeat unit in the Blattodea (Insecta). Insect Biochem. Mol. Biol. 32 (9): 951-960. 10.1016/S0965-1748(01) 00164-3 12213231 (Pubitemid 35025328)
    • (2002) Insect Biochemistry and Molecular Biology , vol.32 , Issue.9 , pp. 951-960
    • Mukha, D.1    Wiegmann, B.M.2    Schal, C.3
  • 26
    • 34249871931 scopus 로고    scopus 로고
    • Intraspecific variation and population structure of the German cockroach, Blattella germanica, revealed with RFLP analysis of the non-transcribed spacer region of ribosomal DNA
    • DOI 10.1111/j.1365-2915.2007.00670.x
    • Mukha, D.V., Kagramanova, A.S., Lazebnaya, I.V., Lazebnyi, O.E., Vargo, E.L., and Schal, C. 2007. Intraspecific variation and population structure of the German cockroach, Blattella germanica, revealed with RFLP analysis of the non-transcribed spacer region of ribosomal DNA. Med. Vet. Entomol. 21 (2): 132-140. 10.1111/j.1365-2915.2007.00670.x 17550432 (Pubitemid 46872708)
    • (2007) Medical and Veterinary Entomology , vol.21 , Issue.2 , pp. 132-140
    • Mukha, D.V.1    Kagramanova, A.S.2    Lazebnaya, I.V.3    Lazebnyi, O.E.4    Vargo, E.L.5    Schal, C.6
  • 27
    • 0033947138 scopus 로고    scopus 로고
    • Concerted evolution of a highly repetitive DNA family in eptatretidae (cyclostomata, agnatha) implies specifically differential homogenization and amplification events in their germ cells
    • Nabeyama, M., Kubota, S., and Kohno, S. 2000. Concerted evolution of a highly repetitive DNA family in eptatretidae (Cyclostomata, Agnatha) implies specifically differential homogenization and amplification events in their germ cells. J. Mol. Evol. 50 (2): 154-169. 10684349 (Pubitemid 30429991)
    • (2000) Journal of Molecular Evolution , vol.50 , Issue.2 , pp. 154-169
    • Nabeyama, M.1    Kubota, S.2    Kohno, S.-I.3
  • 28
    • 27944477670 scopus 로고    scopus 로고
    • Concerted and birth-and-death evolution of multigene families
    • DOI 10.1146/annurev.genet.39.073003.112240
    • Nei, M., and Rooney, A.P. 2005. Concerted and birth-and-death evolution of multigene families. Annu. Rev. Genet. 39 (1): 121-152. 10.1146/annurev.genet. 39.073003.112240 16285855 (Pubitemid 43011110)
    • (2005) Annual Review of Genetics , vol.39 , pp. 121-152
    • Nei, M.1    Rooney, A.P.2
  • 30
    • 0024225215 scopus 로고
    • Ribosomal DNA non-transcribed spacer polymorphism in subterranean mole rats: Genetic differentiation, environmental correlates and phylogenetic relationships
    • Nevo, E., and Beiles, A. 1988. Ribosomal DNA nontranscribed spacer polymorphism in subterranean mole rats: genetic differentiation, environmental correlates, and phylogenetic relationships. Evol. Ecol. 2 (2): 139-156. 10.1007/BF02067273 (Pubitemid 19323196)
    • (1988) Evolutionary Ecology , vol.2 , Issue.2 , pp. 139-156
    • Nevo, E.1    Beiles, A.2
  • 32
    • 0034707210 scopus 로고    scopus 로고
    • Evolution of gene families
    • DOI 10.1016/S0378-1119(00)00428-5, PII S0378111900004285
    • Ohta, T. 2000. Evolution of gene families. Gene, 259 (1-2): 45-52. 10.1016/S0378-1119(00)00428-5 11163960 (Pubitemid 32119235)
    • (2000) Gene , vol.259 , Issue.1-2 , pp. 45-52
    • Ohta, T.1
  • 34
    • 49149086548 scopus 로고    scopus 로고
    • Blattella asahinai (Dictyoptera: Blattellidae): A new predator of lepidopteran eggs in South Texas soybean
    • 10.1603/0013-8746(2008)101[763:BADBAN]2.0.CO;2
    • Pfannenstiel, R.S., Booth, W., Vargo, E.L., and Schal, C. 2008. Blattella asahinai (Dictyoptera: Blattellidae): a new predator of lepidopteran eggs in South Texas soybean. Ann. Entomol. Soc. Am. 101 (4): 763-768. 10.1603/0013-8746(2008)101[763:BADBAN]2.0.CO;2
    • (2008) Ann. Entomol. Soc. Am. , vol.101 , Issue.4 , pp. 763-768
    • Pfannenstiel, R.S.1    Booth, W.2    Vargo, E.L.3    Schal, C.4
  • 35
    • 4143127619 scopus 로고    scopus 로고
    • Mechanisms underlying the evolution and maintenance of functionally heterogeneous 18S rRNA genes in apicomplexans
    • DOI 10.1093/molbev/msh178
    • Rooney, A.P. 2004. Mechanisms underlying the evolution and maintenance of functionally heterogeneous 18S rRNA genes in Apicomplexans. Mol. Biol. Evol. 21 (9): 1704-1711. 10.1093/molbev/msh178 15175411 (Pubitemid 39096886)
    • (2004) Molecular Biology and Evolution , vol.21 , Issue.9 , pp. 1704-1711
    • Rooney, A.P.1
  • 36
    • 17044401340 scopus 로고    scopus 로고
    • Evolution of a large ribosomal RNA multigene family in filamentous fungi: Birth and death of a concerted evolution paradigm
    • 10.1073/pnas.0409689102 15784739
    • Rooney, A.P., and Ward, T.J. 2005. Evolution of a large ribosomal RNA multigene family in filamentous fungi: birth and death of a concerted evolution paradigm. Proc. Natl. Acad. Sci. U.S.A. 102 (14): 5084-5089. 10.1073/pnas.0409689102 15784739
    • (2005) Proc. Natl. Acad. Sci. U.S.A. , vol.102 , Issue.14 , pp. 5084-5089
    • Rooney, A.P.1    Ward, T.J.2
  • 37
    • 0001640748 scopus 로고
    • Cytological studies of Blattella germanica and Blattella asahinai. I. A possible genetic basis of interspecific divergence
    • Ross, M.H. 1988. Cytological studies of Blattella germanica and Blattella asahinai. I. A possible genetic basis of interspecific divergence. Genome, 30 (5): 812-819.
    • (1988) Genome , vol.30 , Issue.5 , pp. 812-819
    • Ross, M.H.1
  • 38
    • 0002811119 scopus 로고
    • Taxonomic revision of the genus Blattella Caudell (Dictyoptera, Blattaria: Blattellidae)
    • 22.
    • Roth, L.M. 1985. Taxonomic revision of the genus Blattella Caudell (Dictyoptera, Blattaria: Blattellidae). Entomol. Scand. 22: 1-221.
    • (1985) Entomol. Scand. , pp. 1-221
    • Roth, L.M.1
  • 40
    • 0017294484 scopus 로고
    • Evolution of repeated DNA sequences by unequal crossover
    • 10.1126/science.1251186 1251186
    • Smith, G.P. 1976. Evolution of repeated DNA sequences by unequal crossover. Science, 191 (4227): 528-535. 10.1126/science.1251186 1251186
    • (1976) Science , vol.191 , Issue.4227 , pp. 528-535
    • Smith, G.P.1
  • 41
    • 70349620201 scopus 로고    scopus 로고
    • Long-term evolution of 5S ribosomal DNA seems to be driven by birth-and-death processes and selection in Ensis razor shells (Mollusca: Bivalvia)
    • 10.1007/s10528-009-9255-1 19633948
    • Vierna, J., Gonzlez-Tizn, A.M., and Martnez-Lage, A. 2009. Long-term evolution of 5S ribosomal DNA seems to be driven by birth-and-death processes and selection in Ensis razor shells (Mollusca: Bivalvia). Biochem. Genet. 47 (9-10): 635-644. 10.1007/s10528-009-9255-1 19633948
    • (2009) Biochem. Genet. , vol.47 , Issue.910 , pp. 635-644
    • Vierna, J.1    Gonzlez-Tizn, A.M.2    Martnez-Lage, A.3
  • 42
    • 74849126916 scopus 로고    scopus 로고
    • Analysis of ITS1 and ITS2 sequences in Ensis razor shells: Suitability as molecular markers at the population and species levels, and evolution of these ribosomal DNA spacers
    • 10.1139/G09-080 20130746
    • Vierna, J., Martnez-Lage, A., and Gonzlez-Tizn, A.M. 2010. Analysis of ITS1 and ITS2 sequences in Ensis razor shells: suitability as molecular markers at the population and species levels, and evolution of these ribosomal DNA spacers. Genome, 53 (1): 23-34. 10.1139/G09-080 20130746
    • (2010) Genome , vol.53 , Issue.1 , pp. 23-34
    • Vierna, J.1    Martnez-Lage, A.2    Gonzlez-Tizn, A.M.3
  • 43
    • 0347996077 scopus 로고    scopus 로고
    • Marked Intragenomic Heterogeneity and Geographical Differentiation of nrDNA ITS in Larix potaninii (Pinaceae)
    • DOI 10.1007/s00239-003-2512-8
    • Wei, X.X., Wang, X.Q., and Hong, D.Y. 2003. Marked intragenomic heterogeneity and geographical differentiation of nrDNA ITS in Larix potaninii (Pinaceae). J. Mol. Evol. 57 (6): 623-635. 10.1007/s00239-003-2512-8 14745531 (Pubitemid 37543976)
    • (2003) Journal of Molecular Evolution , vol.57 , Issue.6 , pp. 623-635
    • Wei, X.-X.1    Wang, X.-Q.2    Hong, D.-Y.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.