Effect of proline position on the antimicrobial mechanism of buforin II

Peptides

Volumn 32, Issue 4, 2011, Pages 677-682

  Xie, Yang ^a,b   Fleming, Eleanor ^a,c   Chen, Jessica L ^a,d   Elmore, Donald E ^a  

^a WELLESLEY COLLEGE   (United States)

^b BETH ISRAEL DEACONESS MEDICAL CENTER   (United States)

^c WASHINGTON UNIVERSITY   (United States)

^d Och Spine at New York Presbyterian Hospitals   (United States)

Author keywords

Buforin II; Histone derived antimicrobial peptide; Membrane translocation; Nucleic acid binding; Proline

Indexed keywords

AVIDIN; BIOTIN; BUFORIN II; NUCLEIC ACID; POLYPEPTIDE ANTIBIOTIC AGENT; PROLINE; UNCLASSIFIED DRUG;

AMINO ACID SUBSTITUTION; AMINO TERMINAL SEQUENCE; ANIMAL CELL; ANTIMICROBIAL ACTIVITY; ARTICLE; BACTERIAL CELL; CARBOXY TERMINAL SEQUENCE; CIRCULAR DICHROISM; DNA BINDING; DRUG EFFECT; ESCHERICHIA COLI; MEMBRANE PERMEABILITY; MUTATION; NONHUMAN; PRIORITY JOURNAL; PROTEIN CONFORMATION; PROTEIN PROTEIN INTERACTION; STRUCTURE ACTIVITY RELATION;

AMINO ACID SEQUENCE; ANTI-INFECTIVE AGENTS; CELL MEMBRANE PERMEABILITY; CIRCULAR DICHROISM; MICROBIAL SENSITIVITY TESTS; MOLECULAR SEQUENCE DATA; PROTEINS; SEQUENCE HOMOLOGY, AMINO ACID;

EID: 79952817415     PISSN: 01969781     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.peptides.2011.01.010     Document Type: Article

References (38)

1. Ambroggio EE, Separovic F, Bowie JH, Fidelio GD, Bagatolli LA. Direct visualization of membrane leakage induced by the antibiotic peptides: maculatin, citropin, and aurein. Biophys J 2005;89:1874-81. (Pubitemid 41233542)
2. Birkemo GA, Lüders T, Andersen Ø, Nes IF, Nissen-Meyer J. Hipposin, a histone-derived antimicrobial peptide in Atlantic halibut (Hippoglossus hippoglossus L.). Biochim Biophys Acta 2003;1646:207-15.
3. Chia BC, Carver JA, Mulhern TD, Bowie JH. Maculatin 1.1, an anti-microbial peptide from the Australian tree frog, Litoria genimaculata solution structure and biological activity. Eur J Biochem 2000;267:1894-908. (Pubitemid 30185275)
4. Cho JH, Sung BH, Kim SC. Buforins: histone H2A-derived antimicrobial peptides from toad stomach. Biochim Biophys Acta 2009;1788:1564-9.
5. Fleming E, Maharaj NP, Chen JL, Nelson RB, Elmore DE. Effect of lipid composition on buforin II structure and membrane entry. Proteins 2008;73:480-91.
6. Hale JD, Hancock RE. Alternative mechanisms of action of cationic antimicrobial peptides on bacteria. Expert Rev Anti Infect Ther 2007;5:951-9. (Pubitemid 350303026)
7. Hariton-Gazal E, Rosenbluh J, Graessmann A, Gilon C, Loyter A. Direct translocation of histone molecules across cell membranes. J Cell Sci 2003;116:4577-86. (Pubitemid 37461612)
8. Jenkins TC. Optical absorbance and fluorescence techniques for measuring DNA-drug interactions. Methods Mol Biol 1997;90:195-218.
9. Jenssen H, Hamill P, Hancock RE. Peptide antimicrobial agents. Clin Microbiol Rev 2006;19:491-511. (Pubitemid 44137212)
10. Kobayashi S, Chikushi A, Tougu S, Imura Y, Nishida M, Yano Y, et al. Membrane translocation mechanism of the antimicrobial peptide buforin 2. Biochemistry 2004;43:15610-6. (Pubitemid 39647487)
11. Kobayashi S, Takeshima K, Park CB, Kim SC, Matsuzaki K. Interactions of the novel antimicrobial peptide buforin 2 with lipid bilayers: proline as a translocation promoting factor. Biochemistry 2000;39:8648-54. (Pubitemid 30489964)
12. Lee K, Shin SY, Kim K, Lim SS, Hahm KS, Kim Y. Antibiotic activity and structural analysis of the scorpion-derived antimicrobial peptide IsCT and its analogs. Biochem Biophys Res Commun 2004;323:712-9. (Pubitemid 39221153)
13. Luders T, Birkemo GA, Nissen-Meyer J, Andersen O, Nes IF. Proline conformation-dependent antimicrobial activity of a proline-rich histone h1 N-terminal Peptide fragment isolated from the skin mucus of Atlantic salmon. Antimicrob Agents Chemother 2005;49:2399-406. (Pubitemid 40734472)
14. Luger K, Mäder AW, Richmond RK, Sargent DF, Richmond TJ. Crystal structure of the nucleosome core particle at 2.8 Å resolution. Nature 1997;389:251-60. (Pubitemid 27406632)
15. Markossian KA, Zamyatnin AA, Kurganov BI. Antibacterial prolinerich oligopeptides and their target proteins. Biochemistry (Mosc) 2004;69:1082-91.
16. Matsuzaki K. Magainins as paradigm for the mode of action of pore forming polypeptides. Biochim Biophys Acta 1998;1376:391-400. (Pubitemid 28517888)
17. Oh D, Shin SY, Lee S, Kang JH, Kim SD, Ryu PD, et al. Role of the hinge region and the tryptophan residue in the synthetic antimicrobial peptides, cecropin A(1-8)-magainin 2(1-12) and its analogues, on their antibiotic activities and structures. Biochemistry 2000;39:11855-64.
18. Otvos Jr L. The short proline-rich antibacterial peptide family. Cell Mol Life Sci 2002;59:1138-50.
19. Park CB, Kim HS, Kim SC. Mechanism of action of the antimicrobial peptide buforin II: buforin II kills microorganisms by penetrating the cell membrane and inhibiting cellular functions. Biochem Biophys Res Commun 1998;244:253-7. (Pubitemid 28419934)
20. Park CB, Kim MS, Kim SC. A novel antimicrobial peptide from Bufo bufo gargarizans. Biochem Biophys Res Commun 1996;218:408-13. (Pubitemid 26037116)
21. Park CB, Yi KS, Matsuzaki K, Kim MS, Kim SC. Structure-activity analysis of buforin II, a histone H2A-derived antimicrobial peptide: the proline hinge is responsible for the cell-penetrating ability of buforin II. Proc Natl Acad Sci 2000;97:8245-50. (Pubitemid 30639657)
22. Pukala TL, Brinkworth CS, Carver JA, Bowie JH. Investigating the importance of the flexible hinge in caerin 1.1: solution structures and activity of two synthetically modified caerin peptides. Biochemistry 2004;43:937-44. (Pubitemid 38141491)
23. Rosenbluh J, Hariton-Gazal E, Dagan A, Rottem S, Graessmann A, Loyter A. Translocation of histone proteins across lipid bilayers and Mycoplasma membranes. J Mol Biol 2005;345:387-400. (Pubitemid 39574859)
24. Rosenbluh J, Singh SK, Gafni Y, Graessmann A, Loyter A. Non-endocytic penetration of core histones into petunia protoplasts and cultured cells: a novel mechanism for the introduction of macromolecules into plant cells. Biochim Biophys Acta 2004;1664:230-40. (Pubitemid 39140997)
25. Rotem S, Mor A. Antimicrobial peptide mimics for improved therapeutic properties. Biochim Biophys Acta 2009;1788:1582-92.
26. Shin SY, Park EJ, Yang ST, Jung HJ, Eom SH, Song WK, et al. Structure-activity analysis of SMAP-29, a sheep leukocytes-derived antimicrobial peptide. Biochem Biophys Res Commun 2001;285:1046-51. (Pubitemid 32918043)
27. Sitaram N. Antimicrobial peptides with unusual amino acid compositions and unusual structures. Curr Med Chem 2006;13:679-96.
28. Song YM, Yang ST, Lim SS, Kim Y, Hahm KS, Kim JI, et al. Effects of L- or D-Pro incorporation into hydrophobic or hydrophilic helix face of amphipathic alpha-helical model peptide on structure and cell selectivity. Biochem Biophys Res Commun 2004;314:615-21. (Pubitemid 38084763)
29. Steinberg DA, Lehrer RI. Designer assays for antimicrobial peptides. Disputing the 'one-size-fits-all' theory. Methods Mol Biol 1997;78:169-86.
30. Suh JY, Lee YT, Park CB, Lee KH, Kim SC, Choi BS. Structural and functional implications of a proline residue in the antimicrobial peptide gaegurin. Eur J Biochem 1999;266:665-74.
31. Thennarasu S, Nagaraj R. Specific antimicrobial and hemolytic activities of 18-residue peptides derived from the amino terminal region of the toxin pardaxin. Protein Eng 1996;9:1219-24.
32. Tsao HS, Spinella SA, Lee AT, Elmore DE. Design of novel histone-derived antimicrobial peptides. Peptides 2009;30:2168-73.
33. Tse WC, Boger DL. A fluorescent intercalator displacement assay for establishing DNA binding selectivity and affinity. Acc Chem Res 2004;37:61-9.
34. Uyterhoeven ET, Butler CH, Ko D, Elmore DE. Investigating the nucleic acid interactions and antimicrobial mechanism of buforin II. FEBS Lett 2008;582:1715-8.
35. Yeaman MR, Yount NY. Mechanisms of antimicrobial peptide action and resistance. Pharmacol Rev 2003;55:27-55. (Pubitemid 36268398)
36. Yi GS, Park CB, Kim SC, Cheong C. Solution structure of an antimicrobial peptide buforin II. FEBS Lett 1996;398:87-90. (Pubitemid 26400347)
37. Zhang L, Benz R, Hancock RE. Influence of proline residues on the antibacterial and synergistic activities of alpha-helical peptides. Biochemistry 1999;38:8102-11.
38. Zhu WL, Lan H, Park Y, Yang ST, Kim JI, Park IS, et al. Effects of Pro→ peptoid residue substitution on cell selectivity and mechanism of antibacterial action of tritrpticin-amide antimicrobial peptide. Biochemistry 2006;45:13007-17. (Pubitemid 44763423)