Toward point-of-care microchip profiling of proteins

Bioanalysis

Volumn 2, Issue 10, 2010, Pages 1745-1754

  Osiri, John K ^a   Shadpour, Hamed ^b  

^a Washington State University   (United States)

^b University of North Carolina at Chapel Hill   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

1D MICROCHIP PROFILING TECHNIQUE; 2D MICROCHIP PROFILING TECHNIQUE; DIAGNOSTIC TEST; ELECTROPHORESIS; ELECTROSPRAY MASS SPECTROMETRY; HUMAN; IMMUNOASSAY; INTERMETHOD COMPARISON; LAB ON A CHIP; LIQUID CHROMATOGRAPHY; MICROCHIP ANALYSIS; POINT OF CARE TESTING; PROTEIN ANALYSIS; PROTEOMICS; REVIEW; SEPARATION TECHNIQUE; DIAGNOSIS; HOSPITAL INFORMATION SYSTEM; IMMUNOLOGY; INSTRUMENTATION; ISOLATION AND PURIFICATION; METHODOLOGY;

BIOLOGICAL MARKER; PROTEIN;

BIOLOGICAL MARKERS; DIAGNOSIS; HUMANS; IMMUNOASSAY; MICROCHIP ANALYTICAL PROCEDURES; POINT-OF-CARE SYSTEMS; PROTEINS;

EID: 79952526279     PISSN: 17576180     EISSN: 17576199     Source Type: Journal    
DOI: 10.4155/bio.10.134     Document Type: Review

References (41)

1. Hardy BJ, Seguin B, Goodsaid F, Jimenez-Sanchez G, Singer PA, Daar AS. Science and society-the next steps for genomic medicine: challenges and opportunities for the developing world. Nat. Rev. Genet. 9, S23-S27 (2008).
2. Feng XJ, Du W, Luo QM, Liu BF. Microfuidic chip: next-generation platform for systems biology Anal Chim. Acta 650, 83-97 (2009).
3. Chen H, Fan ZH. Two-dimensional protein separation in microfuidic devices. Electrophoresis 30, 758-765 (2009).
4. Tran NT, Ayed I, Pallandre A, Taverna M. Recent innovations in protein separation on microchips by electrophoretic methods: an update. Electrophoresis 31, 147-173 (2010).
5. Osiri JK, Shadpour H, Park S, Snowden BC, Chen ZY, Soper SA. Generating high peak capacity 2D maps of complex proteomes using PMMA microchip electrophoresis. Electrophoresis 29, 4984-4992 (2008).
6. Shadpour H, Soper SA. Two-dimensional electrophoretic separation of proteins using poly(methyl methacrylate) microchip. Anal Chem. 78, 3519-3527 (2006). (Pubitemid 43848942)
7. Anderson NL. The clinical plasma proteome: a survey of clinical assays for proteins in plasma and serum. Clin. Chem. 56, 177-185 (2005).
8. Anderson NL, Anderson NG. The human plasma proteome history, character, and diagnostic prospects. Mol. Cell. Proteomics 1, 845-867 (2002).
9. Freire SLS, Wheeler AR. Proteome-on-a-chip: mirage, or on the horizon? Lab Chip 6, 1415-1423 (2006).
10. Vitzthum F, Behrens F, Anderson NL, Shaw JH. Proteomics: from basic research to diagnostic application-a review of requirements and needs. J. Proteome Res. 4, 1086-1097 (2005). (Pubitemid 41208666)
11. Soper SA, Brown K, Ellington A et al. Point-of-care biosensor systems for cancer diagnostics/prognostics. Biosens. Bioelectron. 21, 1932-1942 (2006).
12. Anderson NL, Anderson NG, Pearson TW et al. A human proteome detection and quantitation project. Mol. Cell. Proteomics 8, 883-886 (2009).
13. Sorger PK. Microfuidics closes in on point-of-care assays. Nat. Biotechnol. 26, 1345-1346 (2008).
14. Emrich CA, Medintz IL, Chu WK, Mathies RA. Microfabricated two-dimensional electrophoresis device for differential protein expression profling. Anal Chem. 79, 7360-7366 (2007). (Pubitemid 47606102)
15. Rifai N, Gillette MA, Carr SA. Protein biomarker discovery and validation: the long and uncertain path to clinical utility Nat. Biotechnol. 24, 971-983 (2006). (Pubitemid 44215392)
16. Callesen AK, Mohammed S, Bunkenborg J et al. Serum protein profling by miniaturized solid-phase extraction and matrix-assisted laser desorption/ionization mass spectrometry Rapid Commun. Mass Spectrom. 19, 1578-1586 (2005). (Pubitemid 40831938)
17. Thongboonkerd V, Songtawee N, Sritippayawan S. Urinary proteome profling using microfuidic technology on a chip. J. Proteome Res. 6, 2011-2018 (2007). (Pubitemid 46814522)
18. Christodoulides N, Floriano PN, Miller CS et al. Lab-on-a-chip methods for point-of-care measurements of salivary biomarkers of periodontitis. In: Oral-Based Diagnostics. Malamud D, Niedbala RS (Eds). Annals New York Academy of Science, NY, USA, 411-428 (2007). (Pubitemid 47092556)
19. Spisak S, Tulassay Z, Molnar B, Guttman A. Protein microchips in biomedicine and biomarker discovery Electrophoresis 28, 4261-4273 (2007). (Pubitemid 350259027)
20. Callewaert N, Contreras R, Mitnik-Gankin L, Carey L, Matsudaira P, Ehrlich D. Total serum protein n-glycome profling on a capillary electrophoresis-microfuidics platform. Electrophoresis 25, 3128-3131 (2004). (Pubitemid 39480879)
21. Peterf Z, Kustos I, Kilar F, Kocsis B. Microfuidic chip analysis of outer membrane proteins responsible for serological cross-reaction between three gram-negative bacteria: Proteus morganii o34, Escherichia coli o111 and Salmonella Adelaide o35. J. Chromatogr. A 1155, 214-217 (2007). (Pubitemid 46898416)
22. Trencevska O, Aleksovski V, Stojanoski K. Advanced techniques in clinical practice: use of lab-on-a-chip electrophoresis and other methods in protein profling. J. Med. Biochem. 28, 274-278 (2009).
23. Osiri JK, Shadpour H, Soper SA. Ultra-fast two-dimensional microchip electrophoresis using SDS μ-CGE and microemulsion electrokinetic chromatography for protein separations. Anal Bio Anal Chem. 398(1), 489-498 (2010).
24. Liu JK, Yang S, Lee CS, Devoe DL. Polyacrylamide gel plugs enabling 2D microfuidic protein separations via isoelectric focusing and multiplexed sodium dodecyl sulfate gel electrophoresis. Electrophoresis 29, 2241-2250 (2008). (Pubitemid 351865989)
25. Yang S, Liu JK, Lee CS, Devoe DL. Microfuidic 2D PAGE using multifunctional in situ polyacrylamide gels and discontinuous buffers. Lab Chip 9, 592-599 (2009).
26. Gottschlich N, Jacobson SC, Culbertson CT, Ramsey JM. Two-dimensional electrochromatography/capillary electrophoresis on a microchip. Anal Chem. 73, 2669-2674 (2001). (Pubitemid 32880673)
27. Rocklin RD, Ramsey RS, Ramsey JM. A microfabricated fuidic device for performing two-dimensional liquid-phase separations. Anal Chem. 72, 5244-5249 (2000).
28. Ramsey JD, Jacobson SC, Culbertson CT, Ramsey JM. High-effciency, two-dimensional separations of protein digests on microfuidic devices. Anal Chem. 75, 3758-3764 (2003). (Pubitemid 36962109)
29. Armenta JM, Dawoud AA, Lazar IM. Microfuidic chips for protein differential expression profling. Electrophoresis 30, 1145-1156 (2009).
30. Fortier MH, Bonneil E, Goodley P, Thibault P. Integrated microfuidic device for mass spectrometry-based proteomics and its application to biomarker discovery programs. Anal Chem. 77, 1631-1640 (2005). (Pubitemid 40396255)
31. Lazar IM, Trisiripisal P, Sarvaiya HA. Microfuidic liquid chromatography system for proteomic applications and biomarker screening. Anal Chem. 78, 5513-5524 (2006). (Pubitemid 44182372)
32. Trusch M, Bohlick A, Hildebrand D et al. Application of displacement chromatography for the analysis of a lipid raft proteome. J. Chromatogr. B Analyt. Technol. Biomed. Life Sci. 878, 309-314 (2010).
33. Grossman HB, Messing E, Soloway M et al. Detection of bladder cancer using a point-of-care proteomic assay JAMA 293, 810-816 (2005). (Pubitemid 40250364)
34. Yamada M, Mao P, Fu JP, Han JY Rapid quantifcation of disease-marker proteins using continuous-fow immunoseparation in a nanosieve fuidic device. Anal Chem. 81, 7067-7074 (2009).
35. Peoples MC, Phillips TM, Karnes HT Demonstration of a direct capture immunoaffnity separation for C-reactive protein using a capillary-based microfuidic device. J. Pharmaceut. Biomed. Anal 48, 376-382 (2008).
36. Peoples MC, Karnes HT. Microfuidic capillary system for immunoaffnity separations of C-reactive protein in human serum and cerebrospinal fuid. Anal. Chem. 80, 3853-3858 (2008). (Pubitemid 351705892)
37. Herr E, Hatch AV, Throckmorton DJ et al. Microfuidic immunoassays as rapid saliva-based clinical diagnostics. Proc Natl Acad. Sci. USA 104, 5268-5273 (2007). (Pubitemid 47175669)
38. Qin LD, Vermesh O, Shi QH, Heath JR. Self-powered microfuidic chips for multiplexed protein assays from whole blood. Lab Chip 9, 2016-2020 (2009).
39. Fan R, Vermesh O, Srivastava A et al. Integrated barcode chips for rapid, multiplexed analysis of proteins in microliter quantities of blood. Nat. Biotech. 26, 1373-1378 (2008).
40. Jokerst JV, Jacobson JW, Bhagwandin BD. Programmable nano-bio-chip sensors: analytical meets clinical. Anal Chem. 82, 1571-1579 (2010).
41. Jokerst JV, McDevitt JT. Programmable nano-bio-chips: multifunctional clinical tools for use at the point-of-care. Nanomedicine 5, 143-155 (2010).