메뉴 건너뛰기




Volumn 43, Issue 5, 2011, Pages 932-941

Long-term impacts of zinc and copper enriched sewage sludge additions on bacterial, archaeal and fungal communities in arable and grassland soils

Author keywords

Archaea; Bacteria; Community structure; Cu; Fungi; Sewage sludge; T RFLP; Zn

Indexed keywords

ARCHAEA; COMMUNITY STRUCTURE; CU; T-RFLP; ZN;

EID: 79952452209     PISSN: 00380717     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.soilbio.2011.01.004     Document Type: Article
Times cited : (73)

References (57)
  • 1
    • 13544274032 scopus 로고    scopus 로고
    • Changes in the microbial community of an arable soil caused by long-term metal contamination
    • Abaye D.A., Lawlor K., Hirsch P.R., Brookes P.C. Changes in the microbial community of an arable soil caused by long-term metal contamination. European Journal of Soil Science 2005, 56:93-102.
    • (2005) European Journal of Soil Science , vol.56 , pp. 93-102
    • Abaye, D.A.1    Lawlor, K.2    Hirsch, P.R.3    Brookes, P.C.4
  • 2
    • 53449086190 scopus 로고    scopus 로고
    • Tag-encoded pyrosequencing analysis of bacterial diversity in a single soil type as affected by management and land use
    • Acosta-Martínez V., Dowd S., Sun Y., Allen V. Tag-encoded pyrosequencing analysis of bacterial diversity in a single soil type as affected by management and land use. Soil Biology & Biochemistry 2008, 40:2762-2770.
    • (2008) Soil Biology & Biochemistry , vol.40 , pp. 2762-2770
    • Acosta-Martínez, V.1    Dowd, S.2    Sun, Y.3    Allen, V.4
  • 3
    • 49549096210 scopus 로고    scopus 로고
    • DNA- and RNA-derived assessments of fungal community composition in soil amended with sewage sludge rich in cadmium, copper and zinc
    • Anderson I.C., Parkin P.I., Campbell C.D. DNA- and RNA-derived assessments of fungal community composition in soil amended with sewage sludge rich in cadmium, copper and zinc. Soil Biology & Biochemistry 2008, 40:2358-2365.
    • (2008) Soil Biology & Biochemistry , vol.40 , pp. 2358-2365
    • Anderson, I.C.1    Parkin, P.I.2    Campbell, C.D.3
  • 4
    • 67649239460 scopus 로고    scopus 로고
    • Molecular and functional assessment of bacterial community convergence in metal-amended soils
    • Anderson J.A.H., Hooper M.J., Zak J.C., Cox S.B. Molecular and functional assessment of bacterial community convergence in metal-amended soils. Microbial Ecology 2009, 58:10-22.
    • (2009) Microbial Ecology , vol.58 , pp. 10-22
    • Anderson, J.A.H.1    Hooper, M.J.2    Zak, J.C.3    Cox, S.B.4
  • 5
    • 0032963409 scopus 로고    scopus 로고
    • Wide distribution and diversity of members of the bacterial Kingdom Acidobacterium in the environment
    • Barnes S.M., Takala S.L., Kuske C.R. Wide distribution and diversity of members of the bacterial Kingdom Acidobacterium in the environment. Applied and Environmental Microbiology 1999, 65:1731-1737.
    • (1999) Applied and Environmental Microbiology , vol.65 , pp. 1731-1737
    • Barnes, S.M.1    Takala, S.L.2    Kuske, C.R.3
  • 6
    • 0021645046 scopus 로고
    • Effects of metal toxicity on the size of the soil microbial biomass
    • Brookes P.C., McGrath S.P. Effects of metal toxicity on the size of the soil microbial biomass. Journal of Soil Science 1984, 35:341-346.
    • (1984) Journal of Soil Science , vol.35 , pp. 341-346
    • Brookes, P.C.1    McGrath, S.P.2
  • 9
    • 0028980713 scopus 로고
    • Microbial biomass dynamics following addition of metal-enriched sewage sludge to a sandy loam
    • Chander K., Brookes P.C., Harding A. Microbial biomass dynamics following addition of metal-enriched sewage sludge to a sandy loam. Soil Biology &Biochemistry 1995, 27:1409-1421.
    • (1995) Soil Biology &Biochemistry , vol.27 , pp. 1409-1421
    • Chander, K.1    Brookes, P.C.2    Harding, A.3
  • 10
    • 45049085936 scopus 로고    scopus 로고
    • Population size of indigenous Rhizobium leguminosarum biovar trifolii in long-term field experiments with sewage sludge cake, metal-amended liquid sludge or metal salts: effects of zinc, copper and cadmium
    • Chaudri A., McGrath S., Gibbs P., Chambers B., Carlton-Smith C., Bacon J., Campbell C., Aitken M. Population size of indigenous Rhizobium leguminosarum biovar trifolii in long-term field experiments with sewage sludge cake, metal-amended liquid sludge or metal salts: effects of zinc, copper and cadmium. Soil Biology and Biochemistry 2008, 40:1670-1680.
    • (2008) Soil Biology and Biochemistry , vol.40 , pp. 1670-1680
    • Chaudri, A.1    McGrath, S.2    Gibbs, P.3    Chambers, B.4    Carlton-Smith, C.5    Bacon, J.6    Campbell, C.7    Aitken, M.8
  • 11
    • 0027804103 scopus 로고
    • Non-parametric multivariate analyses of changes in community structure
    • Clarke K.R. Non-parametric multivariate analyses of changes in community structure. Australian Journal of Ecology 1993, 18:117-143.
    • (1993) Australian Journal of Ecology , vol.18 , pp. 117-143
    • Clarke, K.R.1
  • 12
    • 5344280497 scopus 로고    scopus 로고
    • Effects of municipal solid waste compost amendments on soil enymes activities and bacterial genetic diversity
    • Crecchio C., Curci M., Pizzigallo M.A.R., Ricciuti P., Ruggiero P. Effects of municipal solid waste compost amendments on soil enymes activities and bacterial genetic diversity. Soil Biology & Biochemistry 2005, 36:1595-1605.
    • (2005) Soil Biology & Biochemistry , vol.36 , pp. 1595-1605
    • Crecchio, C.1    Curci, M.2    Pizzigallo, M.A.R.3    Ricciuti, P.4    Ruggiero, P.5
  • 13
    • 0036189821 scopus 로고    scopus 로고
    • Evaluating effects of sewage sludge and household compost on soil physical, chemical and microbiological properties
    • Debosz K., Petersen S.O., Kure L.K., Ambus P. Evaluating effects of sewage sludge and household compost on soil physical, chemical and microbiological properties. Applied Soil Ecology 2002, 19:237-248.
    • (2002) Applied Soil Ecology , vol.19 , pp. 237-248
    • Debosz, K.1    Petersen, S.O.2    Kure, L.K.3    Ambus, P.4
  • 17
    • 0035163587 scopus 로고    scopus 로고
    • Phylogenetic specificity and reproducibility and a new method for analysis of terminal restriction fragment profiles of 16S rRNA genes from bacterial communities
    • Dunbar J., Ticknor L.O., Kuske C.R. Phylogenetic specificity and reproducibility and a new method for analysis of terminal restriction fragment profiles of 16S rRNA genes from bacterial communities. Applied and Environmental Microbiology 2001, 67:190-197.
    • (2001) Applied and Environmental Microbiology , vol.67 , pp. 190-197
    • Dunbar, J.1    Ticknor, L.O.2    Kuske, C.R.3
  • 18
    • 0003872857 scopus 로고    scopus 로고
    • Food and Agricultural Organisation of the United Nations, Rome, FAO
    • FAO World Reference Base for Soil Resources 1998, Food and Agricultural Organisation of the United Nations, Rome.
    • (1998) World Reference Base for Soil Resources
  • 19
    • 0028160780 scopus 로고
    • Soil microbial biomass and microbial activity in soils treated with heavy-metal contaminated sewage-sludge
    • Fließach A., Martens R., Reber H.H. Soil microbial biomass and microbial activity in soils treated with heavy-metal contaminated sewage-sludge. Soil Biology & Biochemistry 1994, 26:1201-1205.
    • (1994) Soil Biology & Biochemistry , vol.26 , pp. 1201-1205
    • Fließach, A.1    Martens, R.2    Reber, H.H.3
  • 20
    • 79952444083 scopus 로고
    • Phospholipid fatty-acid composition, biomass, and activity of microbial communities from 2 soil types experimentally exposed to different heavy-metals
    • Frostegård A., Tunlid A., Bååth E. Phospholipid fatty-acid composition, biomass, and activity of microbial communities from 2 soil types experimentally exposed to different heavy-metals. Soil Biology & Biochemistry 1993, 32:1529-1536.
    • (1993) Soil Biology & Biochemistry , vol.32 , pp. 1529-1536
    • Frostegård, A.1    Tunlid, A.2    Bååth, E.3
  • 21
    • 2342425150 scopus 로고    scopus 로고
    • Effects of sewage sludge amendment on humic acids and microbiological properties of a semiarid Mediterranean soil
    • Garcia-Gil J.C., Plaza C., Senesi N., Brunetti G., Polo A. Effects of sewage sludge amendment on humic acids and microbiological properties of a semiarid Mediterranean soil. Biology & Fertility of Soils 2004, 39:320-328.
    • (2004) Biology & Fertility of Soils , vol.39 , pp. 320-328
    • Garcia-Gil, J.C.1    Plaza, C.2    Senesi, N.3    Brunetti, G.4    Polo, A.5
  • 22
    • 0027580147 scopus 로고
    • ITS primers with enhanced specificity for basidiomycetes: applications to the identification of mycorrhiza and rusts
    • Gardes M., Bruns T.D. ITS primers with enhanced specificity for basidiomycetes: applications to the identification of mycorrhiza and rusts. Molecular Ecology 1993, 2:113-118.
    • (1993) Molecular Ecology , vol.2 , pp. 113-118
    • Gardes, M.1    Bruns, T.D.2
  • 25
    • 0032171231 scopus 로고    scopus 로고
    • Toxicity of heavy metals to microorganisms and microbial processes in agricultural soils: a review
    • Giller K.E., Witter E., McGrath S.P. Toxicity of heavy metals to microorganisms and microbial processes in agricultural soils: a review. Soil Biology & Biochemistry 1998, 30:1389-1414.
    • (1998) Soil Biology & Biochemistry , vol.30 , pp. 1389-1414
    • Giller, K.E.1    Witter, E.2    McGrath, S.P.3
  • 26
    • 1342267264 scopus 로고    scopus 로고
    • Name that microbe: rapid identification of taxa responsible for individual fragments in fingerprints of microbial community structure
    • Grant A., Ogilvie L.A. Name that microbe: rapid identification of taxa responsible for individual fragments in fingerprints of microbial community structure. Molecular Ecology 2004, 4:133-136.
    • (2004) Molecular Ecology , vol.4 , pp. 133-136
    • Grant, A.1    Ogilvie, L.A.2
  • 29
    • 54949125352 scopus 로고    scopus 로고
    • TRiFLE, a program for in silico terminal restriction length polymorphism analysis with user-defined sequence sets
    • Junier T., Witzel K.P. TRiFLE, a program for in silico terminal restriction length polymorphism analysis with user-defined sequence sets. Applied and Environmental Microbiology 2008, 74:6452-6456.
    • (2008) Applied and Environmental Microbiology , vol.74 , pp. 6452-6456
    • Junier, T.1    Witzel, K.P.2
  • 30
  • 31
    • 0345643360 scopus 로고    scopus 로고
    • Effects of the land application of sewage sludge on soil heavy metal concentrations and soil microbial communities
    • Kelly J.J., Häggblom M., Tate R.L. Effects of the land application of sewage sludge on soil heavy metal concentrations and soil microbial communities. Soil Biology & Biochemistry 1999, 31:1467-1470.
    • (1999) Soil Biology & Biochemistry , vol.31 , pp. 1467-1470
    • Kelly, J.J.1    Häggblom, M.2    Tate, R.L.3
  • 32
    • 4644283131 scopus 로고    scopus 로고
    • Impact of lime, nitrogen and plant species on bacterial community structure in grassland microcosms
    • Kennedy N., Brodies E., Connolly J., Clipson N. Impact of lime, nitrogen and plant species on bacterial community structure in grassland microcosms. Environmental Microbiology 2004, 6:1070-1080.
    • (2004) Environmental Microbiology , vol.6 , pp. 1070-1080
    • Kennedy, N.1    Brodies, E.2    Connolly, J.3    Clipson, N.4
  • 33
    • 49249124904 scopus 로고    scopus 로고
    • The influence of soil properties on the structure of bacterial and fungal communities across land-use types
    • Lauber C.L., Strickland M.S., Bradford M.A., Fierer N. The influence of soil properties on the structure of bacterial and fungal communities across land-use types. Soil Biology & Biochemistry 2008, 40:2407-2415.
    • (2008) Soil Biology & Biochemistry , vol.40 , pp. 2407-2415
    • Lauber, C.L.1    Strickland, M.S.2    Bradford, M.A.3    Fierer, N.4
  • 34
    • 47349088053 scopus 로고    scopus 로고
    • Members of the phylum Acidobacteria are dominant and metabolically active in rhizosphere soil
    • Lee S.H., Ka J.O., Cho J.C. Members of the phylum Acidobacteria are dominant and metabolically active in rhizosphere soil. FEMS Microbiology Letters 2008, 285:263-269.
    • (2008) FEMS Microbiology Letters , vol.285 , pp. 263-269
    • Lee, S.H.1    Ka, J.O.2    Cho, J.C.3
  • 35
    • 0030661563 scopus 로고    scopus 로고
    • Characterisation of microbial diversity by determining terminal restriction fragment length polymorphisms of genes encoding 16S rRNA
    • Liu W.T., Marsh T.L., Cheng H., Forney L.J. Characterisation of microbial diversity by determining terminal restriction fragment length polymorphisms of genes encoding 16S rRNA. Applied & Environmental Microbiology 1997, 63:4516-4522.
    • (1997) Applied & Environmental Microbiology , vol.63 , pp. 4516-4522
    • Liu, W.T.1    Marsh, T.L.2    Cheng, H.3    Forney, L.J.4
  • 37
    • 49249111887 scopus 로고    scopus 로고
    • Multiple profiling of soil microbial communities identifies potential genetic markers of metal-enriched sewage sludge
    • Macdonald C.A., Campbell C.D., Bacon J.R., Singh B.K. Multiple profiling of soil microbial communities identifies potential genetic markers of metal-enriched sewage sludge. FEMS Microbiology Ecology 2008, 65:555-564.
    • (2008) FEMS Microbiology Ecology , vol.65 , pp. 555-564
    • Macdonald, C.A.1    Campbell, C.D.2    Bacon, J.R.3    Singh, B.K.4
  • 38
    • 77955175529 scopus 로고    scopus 로고
    • Relative impact of soil, metal source and metal concentration on bacterial community structure and community tolerance
    • Macdonald C.A., Yang X., Clark I.M., Zhao F.J., Hirsch P.R., McGrath S.P. Relative impact of soil, metal source and metal concentration on bacterial community structure and community tolerance. Soil Biology & Biochemistry 2010, 42:1408-1417.
    • (2010) Soil Biology & Biochemistry , vol.42 , pp. 1408-1417
    • Macdonald, C.A.1    Yang, X.2    Clark, I.M.3    Zhao, F.J.4    Hirsch, P.R.5    McGrath, S.P.6
  • 40
    • 79251600657 scopus 로고
    • A simplified method for the extraction of the metals Fe, Zn, Ni, Cd, Pb, Cr, Mo and Mn from soils and sewage sludges
    • McGrath S.P., Cunliffe C.H. A simplified method for the extraction of the metals Fe, Zn, Ni, Cd, Pb, Cr, Mo and Mn from soils and sewage sludges. Journal of Science, Food & Agriculture 1985, 36:794-798.
    • (1985) Journal of Science, Food & Agriculture , vol.36 , pp. 794-798
    • McGrath, S.P.1    Cunliffe, C.H.2
  • 41
    • 0003610105 scopus 로고
    • Ministry of Agriculture, Fisheries and Food, HMSO, London
    • Analysis of Agricultural Materials 1986, Ministry of Agriculture, Fisheries and Food, HMSO, London, pp.226.
    • (1986) Analysis of Agricultural Materials , pp. 226
  • 43
    • 33845367389 scopus 로고    scopus 로고
    • Variation partitioning of species data matrices: estimation and comparison of fraction
    • Peres-Net P.R., Legendre P., Dray S., Borcard D. Variation partitioning of species data matrices: estimation and comparison of fraction. Ecology 2006, 87:2614-2625.
    • (2006) Ecology , vol.87 , pp. 2614-2625
    • Peres-Net, P.R.1    Legendre, P.2    Dray, S.3    Borcard, D.4
  • 45
    • 20344408079 scopus 로고    scopus 로고
    • Functional activity and microbial community structure in soils amended with bimetallic sludges
    • Renella G., Mench M., Gelsomino A., Landi L., Nanniperi P. Functional activity and microbial community structure in soils amended with bimetallic sludges. Soil Biology & Biochemistry 2005, 37:1498-1506.
    • (2005) Soil Biology & Biochemistry , vol.37 , pp. 1498-1506
    • Renella, G.1    Mench, M.2    Gelsomino, A.3    Landi, L.4    Nanniperi, P.5
  • 47
    • 0032856426 scopus 로고    scopus 로고
    • Analysis of bacterial communities in heavy metal-contaminated soils at different levels of resolution
    • Sandaa R.A., Torsvik V., Enger Ø, Daae F.L., Castberg T., Hahn D. Analysis of bacterial communities in heavy metal-contaminated soils at different levels of resolution. FEMS Microbiology Ecology 1999, 30:237-251.
    • (1999) FEMS Microbiology Ecology , vol.30 , pp. 237-251
    • Sandaa, R.A.1    Torsvik, V.2    Enger Ø3    Daae, F.L.4    Castberg, T.5    Hahn, D.6
  • 48
    • 0035119312 scopus 로고    scopus 로고
    • Influence of long-term heavy-metal contamination on microbial communities in soil
    • Sandaa R.A., Torsvik V., Enger Ø Influence of long-term heavy-metal contamination on microbial communities in soil. Soil Biology and Biochemistry 2001, 33:287-295.
    • (2001) Soil Biology and Biochemistry , vol.33 , pp. 287-295
    • Sandaa, R.A.1    Torsvik, V.2    Enger Ø3
  • 49
    • 50249150207 scopus 로고    scopus 로고
    • Advances in the use of terminal restriction fragment length polymorphism (T-RFLP) analysis of 16S rRNA genes to characterize microbial communities
    • Schütte U.M.E., Abdo Z., Bent S.J., Shyu C., Williams C.J., Pierson J.D., Forney L.J. Advances in the use of terminal restriction fragment length polymorphism (T-RFLP) analysis of 16S rRNA genes to characterize microbial communities. Applied Microbiology Biotechnology 2008, 80:365-380.
    • (2008) Applied Microbiology Biotechnology , vol.80 , pp. 365-380
    • Schütte, U.M.E.1    Abdo, Z.2    Bent, S.J.3    Shyu, C.4    Williams, C.J.5    Pierson, J.D.6    Forney, L.J.7
  • 50
    • 0035658341 scopus 로고    scopus 로고
    • Seasonal, soil type, and alternative management influences on microbial communities of vegetable cropping systems
    • Schutter M.E., Sandeno J.M., Dick R.P. Seasonal, soil type, and alternative management influences on microbial communities of vegetable cropping systems. Biology & Fertility of Soils 2001, 34:397-410.
    • (2001) Biology & Fertility of Soils , vol.34 , pp. 397-410
    • Schutter, M.E.1    Sandeno, J.M.2    Dick, R.P.3
  • 51
    • 0345729880 scopus 로고    scopus 로고
    • Effects of sewage sludge amendment of soil aggregation
    • Sort X., Alcaniz J.M. Effects of sewage sludge amendment of soil aggregation. Land Degradation and Development 1999, 10:3-12.
    • (1999) Land Degradation and Development , vol.10 , pp. 3-12
    • Sort, X.1    Alcaniz, J.M.2
  • 53
    • 33751423047 scopus 로고    scopus 로고
    • Attempts to derive EC50 values for heavy metals from land-applied Cu-, Ni-, and Zn-spiked sewage sludge
    • Speir T.W., van Schaik A.P., Hunter L.C., Ryburn J.L., Percival H.J. Attempts to derive EC50 values for heavy metals from land-applied Cu-, Ni-, and Zn-spiked sewage sludge. Soil Biology & Biochemistry 2007, 39:539-549.
    • (2007) Soil Biology & Biochemistry , vol.39 , pp. 539-549
    • Speir, T.W.1    van Schaik, A.P.2    Hunter, L.C.3    Ryburn, J.L.4    Percival, H.J.5
  • 54
    • 75449108837 scopus 로고    scopus 로고
    • A single application of Cu to field soil has long-term effects on bacterial community structure, diversity and soil processes
    • Wakelin S.A., Chu G., Liang Y., McLaughlin M. A single application of Cu to field soil has long-term effects on bacterial community structure, diversity and soil processes. Pedobiologia 2010, 53:149-158.
    • (2010) Pedobiologia , vol.53 , pp. 149-158
    • Wakelin, S.A.1    Chu, G.2    Liang, Y.3    McLaughlin, M.4
  • 55
    • 0034526469 scopus 로고    scopus 로고
    • Linking microbial community composition to function in a tropical soil
    • Waldrop M.P., Balser T.C., Firestone M.K. Linking microbial community composition to function in a tropical soil. Soil Biology & Biochemistry 2000, 32:1837-1846.
    • (2000) Soil Biology & Biochemistry , vol.32 , pp. 1837-1846
    • Waldrop, M.P.1    Balser, T.C.2    Firestone, M.K.3
  • 57
    • 53949092460 scopus 로고
    • Analysis of Phylogenetic Relationship by Amplification and Direct Sequencing of Ribosomal RNA Genes
    • Academic Press, New York, M.A. Innis, D.H. Gelfand, J.J. Sninsky, T.J. White (Eds.)
    • White T.J., Bruns T.D., Lee S., Taylor J. Analysis of Phylogenetic Relationship by Amplification and Direct Sequencing of Ribosomal RNA Genes. PCR Protocol: A Guide to Method and Applications 1990, 315-322. Academic Press, New York. M.A. Innis, D.H. Gelfand, J.J. Sninsky, T.J. White (Eds.).
    • (1990) PCR Protocol: A Guide to Method and Applications , pp. 315-322
    • White, T.J.1    Bruns, T.D.2    Lee, S.3    Taylor, J.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.