-
1
-
-
33748867012
-
Phylogenomic analysis of the GIY-YIG nuclease superfamily
-
Dunin-Horkawicz, S., Feder, M. and Bujnicki, J.M. (2006) Phylogenomic analysis of the GIY-YIG nuclease superfamily. BMC Genomics, 7, 98.
-
(2006)
BMC Genomics
, vol.7
, pp. 98
-
-
Dunin-Horkawicz, S.1
Feder, M.2
Bujnicki, J.M.3
-
2
-
-
0036828959
-
Catalytic domain structure and hypothesis for function of GIY-YIG intron endonuclease i-TevI
-
Van Roey, P., Meehan, L., Kowalski, J.C., Belfort, M. and Derbyshire, V. (2002) Catalytic domain structure and hypothesis for function of GIY-YIG intron endonuclease I-TevI. Nat. Struct. Biol., 9, 806-811. (Pubitemid 35257778)
-
(2002)
Nature Structural Biology
, vol.9
, Issue.11
, pp. 806-811
-
-
Van Roey, P.1
Meehan, L.2
Kowalski, J.C.3
Belfort, M.4
Derbyshire, V.5
-
3
-
-
34548267639
-
Type II restriction endonuclease R.Eco29kI is a member of the GIY-YIG nuclease superfamily
-
Ibryashkina, E.M., Zakharova, M.V., Baskunov, V.B., Bogdanova, E.S., Nagornykh, M.O., Den'mukhamedov, M.M., Melnik, B.S., Kolinski, A., Gront, D., Feder, M. et al. (2007) Type II restriction endonuclease R.Eco29kI is a member of the GIY-YIG nuclease superfamily. BMC Struct. Biol., 7, 48.
-
(2007)
BMC Struct. Biol.
, vol.7
, pp. 48
-
-
Ibryashkina, E.M.1
Zakharova, M.V.2
Baskunov, V.B.3
Bogdanova, E.S.4
Nagornykh, M.O.5
Den'Mukhamedov, M.M.6
Melnik, B.S.7
Kolinski, A.8
Gront, D.9
Feder, M.10
-
4
-
-
49449103183
-
Amino acid residues in the GIY-YIG endonuclease II of phage T4 affecting sequence recognition and binding as well as catalysis
-
Lagerback, P. and Carlson, K. (2008) Amino acid residues in the GIY-YIG endonuclease II of phage T4 affecting sequence recognition and binding as well as catalysis. J. Bacteriol., 190, 5533-5544.
-
(2008)
J. Bacteriol.
, vol.190
, pp. 5533-5544
-
-
Lagerback, P.1
Carlson, K.2
-
5
-
-
77950019411
-
Structure of bacteriophage T4 endonuclease II mutant E118A, a tetrameric GIY-YIG enzyme
-
Andersson, C.E., Lagerback, P. and Carlson, K. (2010) Structure of bacteriophage T4 endonuclease II mutant E118A, a tetrameric GIY-YIG enzyme. J. Mol. Biol., 397, 1003-1016.
-
(2010)
J. Mol. Biol.
, vol.397
, pp. 1003-1016
-
-
Andersson, C.E.1
Lagerback, P.2
Carlson, K.3
-
6
-
-
0033562780
-
Configuration of the catalytic GIY-YIG domain of intron endonuclease I-Tevl: Coincidence of computational and molecular findings
-
DOI 10.1093/nar/27.10.2115
-
Kowalski, J.C., Belfort, M., Stapleton, M.A., Holpert, M., Dansereau, J.T., Pietrokovski, S., Baxter, S.M. and Derbyshire, V. (1999) Configuration of the catalytic GIY-YIG domain of intronendonuclease I-TevI: coincidence of computational and molecular findings. Nucleic Acids Res., 27, 2115-2125. (Pubitemid 29219240)
-
(1999)
Nucleic Acids Research
, vol.27
, Issue.10
, pp. 2115-2125
-
-
Kowalski, J.C.1
Belfort, M.2
Stapleton, M.A.3
Holpert, M.4
Dansereau, J.T.5
Pietrokovski, S.6
Baxter, S.M.7
Derbyshire, V.8
-
7
-
-
0031556945
-
Two-domain structure of the td intron-encoded endonuclease I-TevI correlates with the two-domain configuration of the homing site
-
DOI 10.1006/jmbi.1996.0754
-
Derbyshire, V., Kowalski, J.C., Dansereau, J.T., Hauer, C.R. and Belfort, M. (1997) Two-domain structure of the td intron-encoded endonuclease I-TevI correlates with the two-domain configuration of the homing site. J. Mol. Biol., 265, 494-506. (Pubitemid 27113036)
-
(1997)
Journal of Molecular Biology
, vol.265
, Issue.5
, pp. 494-506
-
-
Derbyshire, V.1
Kowalski, J.C.2
Dansereau, J.T.3
Hauer, C.R.4
Belfort, M.5
-
8
-
-
0034595822
-
Purification of the novel endonuclease, Hpy188I, and cloning of its restriction-modification genes reveal evidence of its horizontal transfer to the Helicobacter pylori genome
-
DOI 10.1074/jbc.M910303199
-
Xu, Q., Stickel, S., Roberts, R.J., Blaser, M.J. and Morgan, R.D. (2000) Purification of the novel endonuclease, Hpy188I, and cloning of its restriction-modification genes reveal evidence of its horizontal transfer to the Helicobacter pylori genome. J. Biol. Chem., 275, 17086-17093. (Pubitemid 30398952)
-
(2000)
Journal of Biological Chemistry
, vol.275
, Issue.22
, pp. 17086-17093
-
-
Xu, Q.1
Stickel, S.2
Roberts, R.J.3
Blaser, M.J.4
Morgan, R.D.5
-
9
-
-
33644619706
-
Prokaryotic nucleotide excision repair: The UvrABC system
-
Truglio, J.J., Croteau, D.L., Van Houten, B. and Kisker, C. (2006) Prokaryotic nucleotide excision repair: the UvrABC system. Chem. Rev., 106, 233-252.
-
(2006)
Chem. Rev.
, vol.106
, pp. 233-252
-
-
Truglio, J.J.1
Croteau, D.L.2
Van Houten, B.3
Kisker, C.4
-
10
-
-
39149131021
-
Cooperative damage recognition by UvrA and UvrB: Identification of UvrA residues that mediate DNA binding
-
Croteau, D.L., DellaVecchia, M.J., Perera, L. and Van Houten, B. (2008) Cooperative damage recognition by UvrA and UvrB: identification of UvrA residues that mediate DNA binding. DNA Repair, 7, 392-404.
-
(2008)
DNA Repair
, vol.7
, pp. 392-404
-
-
Croteau, D.L.1
Dellavecchia, M.J.2
Perera, L.3
Van Houten, B.4
-
11
-
-
33846531362
-
Structure of the C-terminal half of UvrC reveals an RNase H endonuclease domain with an Argonaute-like catalytic triad
-
DOI 10.1038/sj.emboj.7601497, PII 7601497
-
Karakas, E., Truglio, J.J., Croteau, D., Rhau, B., Wang, L., Van Houten, B. and Kisker, C. (2007) Structure of the C-terminal half of UvrC reveals an RNase H endonuclease domain with an Argonaute-like catalytic triad. EMBO J., 26, 613-622. (Pubitemid 46160960)
-
(2007)
EMBO Journal
, vol.26
, Issue.2
, pp. 613-622
-
-
Karakas, E.1
Truglio, J.J.2
Croteau, D.3
Rhau, B.4
Wang, L.5
Van Houten, B.6
Kisker, C.7
-
12
-
-
20144386860
-
Structural insights into the first incision reaction during nucleotide excision repair
-
DOI 10.1038/sj.emboj.7600568
-
Truglio, J.J., Rhau, B., Croteau, D.L., Wang, L., Skorvaga, M., Karakas, E., DellaVecchia, M.J., Wang, H., Van Houten, B. and Kisker, C. (2005) Structural insights into the first incision reaction during nucleotide excision repair. EMBO J., 24, 885-894. (Pubitemid 40470138)
-
(2005)
EMBO Journal
, vol.24
, Issue.5
, pp. 885-894
-
-
Truglio, J.J.1
Rhau, B.2
Croteau, D.L.3
Wang, L.4
Skorvaga, M.5
Karakas, E.6
DellaVecchia, M.J.7
Wang, H.8
Van Houten, B.9
Kisker, C.10
-
13
-
-
0037022344
-
Cho, a second endonuclease involved in Escherichia coli nucleotide excision repair
-
DOI 10.1073/pnas.032584099
-
Moolenaar, G.F., van Rossum-Fikkert, S., van Kesteren, M. and Goosen, N. (2002) Cho, a second endonuclease involved in Escherichia coli nucleotide excision repair. Proc. Natl Acad. Sci. USA, 99, 1467-1472. (Pubitemid 34136516)
-
(2002)
Proceedings of the National Academy of Sciences of the United States of America
, vol.99
, Issue.3
, pp. 1467-1472
-
-
Moolenaar, G.F.1
Van Rossum-Fikkert, S.2
Van Kesteren, M.3
Goosen, N.4
-
14
-
-
0347990576
-
Slx1-Slx4 Are Subunits of a Structure-specific Endonuclease That Maintains Ribosomal DNA in Fission Yeast
-
DOI 10.1091/mbc.E03-08-0586
-
Coulon, S., Gaillard, P.H., Chahwan, C., McDonald, W.H., Yates, J.R. III and Russell, P. (2004) Slx1-Slx4 are subunits of a structure-specific endonuclease that maintains ribosomal DNA in fission yeast. Mol. Biol. Cell, 15, 71-80. (Pubitemid 38044944)
-
(2004)
Molecular Biology of the Cell
, vol.15
, Issue.1
, pp. 71-80
-
-
Coulon, S.1
Gaillard, P.-H.L.2
Chahwan, C.3
McDonald, W.H.4
Yates III, J.R.5
Russell, P.6
-
15
-
-
0038167328
-
Slx1 - Slx4 is a second structure-specific endonuclease functionally redundant with Sgs1 - Top3
-
DOI 10.1101/gad.1105203
-
Fricke, W.M. and Brill, S.J. (2003) Slx1-Slx4 is a second structure-specific endonuclease functionally redundant with Sgs1-Top3. Genes Dev., 17, 1768-1778. (Pubitemid 36870339)
-
(2003)
Genes and Development
, vol.17
, Issue.14
, pp. 1768-1778
-
-
Fricke, W.M.1
Brill, S.J.2
-
16
-
-
67649636091
-
Control of genome stability by SLX protein complexes
-
Rouse, J. (2009) Control of genome stability by SLX protein complexes. Biochem. Soc. Trans., 37, 495-510.
-
(2009)
Biochem. Soc. Trans.
, vol.37
, pp. 495-510
-
-
Rouse, J.1
-
17
-
-
67649655402
-
Human SLX4 is a Holliday junction resolvase subunit that binds multiple DNA repair/recombination endonucleases
-
Fekairi, S., Scaglione, S., Chahwan, C., Taylor, E.R., Tissier, A., Coulon, S., Dong, M.Q., Ruse, C., Yates, J.R. III, Russell, P. et al. (2009) Human SLX4 is a Holliday junction resolvase subunit that binds multiple DNA repair/recombination endonucleases. Cell, 138, 78-89.
-
(2009)
Cell
, vol.138
, pp. 78-89
-
-
Fekairi, S.1
Scaglione, S.2
Chahwan, C.3
Taylor, E.R.4
Tissier, A.5
Coulon, S.6
Dong, M.Q.7
Ruse, C.8
Yates Iii, J.R.9
Russell, P.10
-
18
-
-
0031021619
-
Penelope, a new family of transposable elements and its possible role in hybrid dysgenesis in Drosophila virilis
-
DOI 10.1073/pnas.94.1.196
-
Evgen'ev, M.B., Zelentsova, H., Shostak, N., Kozitsina, M., Barskyi, V., Lankenau, D.H. and Corces, V.G. (1997) Penelope, a new family of transposable elements and its possible role in hybrid dysgenesis in Drosophila virilis. Proc. Natl Acad. Sci. USA, 94, 196-201. (Pubitemid 27027186)
-
(1997)
Proceedings of the National Academy of Sciences of the United States of America
, vol.94
, Issue.1
, pp. 196-201
-
-
Evgen'ev, M.B.1
Zelentsova, H.2
Shostak, N.3
Kozitsina, M.4
Barskyi, V.5
Lankenau, D.-H.6
Corces, V.G.7
-
19
-
-
6944240085
-
Reverse tanscriptase and endonuclease activities encoded by Penelope-like retroelements
-
DOI 10.1073/pnas.0406281101
-
Pyatkov, K.I., Arkhipova, I.R., Malkova, N.V., Finnegan, D.J. and Evgen'ev, M.B. (2004) Reverse transcriptase and endonuclease activities encoded by Penelope-like retroelements. Proc. Natl Acad. Sci. USA, 101, 14719-14724. (Pubitemid 39410741)
-
(2004)
Proceedings of the National Academy of Sciences of the United States of America
, vol.101
, Issue.41
, pp. 14719-14724
-
-
Pyatkov, K.I.1
Arkhipova, I.R.2
Malkova, N.V.3
Finnegan, D.J.4
Evgen'ev, M.B.5
-
20
-
-
0343067128
-
Intronic GIY-YIG endonuclease gene in the mitochondrial genome of Podospora curvicolla: Evidence for mobility
-
Saguez, C., Lecellier, G. and Koll, F. (2000) Intronic GIY-YIG endonuclease gene in the mitochondrial genome of Podospora curvicolla: evidence for mobility. Nucleic Acids Res., 28, 1299-1306. (Pubitemid 30142671)
-
(2000)
Nucleic Acids Research
, vol.28
, Issue.6
, pp. 1299-1306
-
-
Saguez, C.1
Lecellier, G.2
Koll, F.3
-
22
-
-
33644756595
-
Homing endonuclease structure and function
-
DOI 10.1017/S0033583505004063, PII S0033583505004063
-
Stoddard, B.L. (2005) Homing endonuclease structure and function. Q. Rev. Biophys., 38, 49-95. (Pubitemid 43338672)
-
(2005)
Quarterly Reviews of Biophysics
, vol.38
, Issue.1
, pp. 49-95
-
-
Stoddard, B.L.1
-
23
-
-
0035898540
-
Intertwined structure of the DNA-binding domain of intron endonuclease I-TevI with its substrate
-
DOI 10.1093/emboj/20.14.3631
-
Van Roey, P., Waddling, C.A., Fox, K.M., Belfort, M. and Derbyshire, V. (2001) Intertwined structure of the DNA-binding domain of intron endonuclease I-TevI with its substrate. EMBO J., 20, 3631-3637. (Pubitemid 32691774)
-
(2001)
EMBO Journal
, vol.20
, Issue.14
, pp. 3631-3637
-
-
Van Roey, P.1
Waddling, C.A.2
Fox, K.M.3
Belfort, M.4
Derbyshire, V.5
-
24
-
-
60849102182
-
Type II restriction endonuclease R.Hpy188I belongs to the GIY-YIG nuclease superfamily but exhibits an unusual active site
-
Kaminska, K.H., Kawai, M., Boniecki, M., Kobayashi, I. and Bujnicki, J.M. (2008) Type II restriction endonuclease R.Hpy188I belongs to the GIY-YIG nuclease superfamily, but exhibits an unusual active site. BMC Struct. Biol., 8, 48.
-
(2008)
BMC Struct. Biol.
, vol.8
, pp. 48
-
-
Kaminska, K.H.1
Kawai, M.2
Boniecki, M.3
Kobayashi, I.4
Bujnicki, J.M.5
-
25
-
-
39449106934
-
Tetrameric restriction enzymes: Expansion to the GIY-YIG nuclease family
-
DOI 10.1093/nar/gkm1090
-
Gasiunas, G., Sasnauskas, G., Tamulaitis, G., Urbanke, C., Razaniene, D. and Siksnys, V. (2008) Tetrameric restriction enzymes: expansion to the GIY-YIG nuclease family. Nucleic Acids Res., 36, 938-949. (Pubitemid 351267248)
-
(2008)
Nucleic Acids Research
, vol.36
, Issue.3
, pp. 938-949
-
-
Gasiunas, G.1
Sasnauskas, G.2
Tamulaitis, G.3
Urbanke, C.4
Razaniene, D.5
Siksnys, V.6
-
26
-
-
46349101158
-
Structural and evolutionary classification of Type II restriction enzymes based on theoretical and experimental analyses
-
DOI 10.1093/nar/gkn175
-
Orlowski, J. and Bujnicki, J.M. (2008) Structural and evolutionary classification of Type II restriction enzymes based on theoretical and experimental analyses. Nucleic Acids Res., 36, 3552-3569. (Pubitemid 351917520)
-
(2008)
Nucleic Acids Research
, vol.36
, Issue.11
, pp. 3552-3569
-
-
Orlowski, J.1
Bujnicki, J.M.2
-
27
-
-
0035883723
-
Structure and function of type II restriction endonucleases
-
Pingoud, A. and Jeltsch, A. (2001) Structure and function of type II restriction endonucleases. Nucleic Acids Res., 29, 3705-3727. (Pubitemid 32910514)
-
(2001)
Nucleic Acids Research
, vol.29
, Issue.18
, pp. 3705-3727
-
-
Pingoud, A.1
Jeltsch, A.2
-
28
-
-
67649888360
-
Crystal structure of the beta beta alpha-Me type II restriction endonuclease Hpy99I with target DNA
-
Sokolowska, M., Czapinska, H. and Bochtler, M. (2009) Crystal structure of the beta beta alpha-Me type II restriction endonuclease Hpy99I with target DNA. Nucleic Acids Res, 37, 3799-3810.
-
(2009)
Nucleic Acids Res
, vol.37
, pp. 3799-3810
-
-
Sokolowska, M.1
Czapinska, H.2
Bochtler, M.3
-
29
-
-
27644485012
-
Structure of the metal-independent restriction enzyme Bfil reveals fusion of a specific DNA-binding domain with a nonspecific nuclease
-
DOI 10.1073/pnas.0507949102
-
Grazulis, S., Manakova, E., Roessle, M., Bochtler, M., Tamulaitiene, G., Huber, R. and Siksnys, V. (2005) Structure of the metal-independent restriction enzyme BfiI reveals fusion of a specific DNA-binding domain with a nonspecific nuclease. Proc. Natl Acad. Sci. USA, 102, 15797-15802. (Pubitemid 41552822)
-
(2005)
Proceedings of the National Academy of Sciences of the United States of America
, vol.102
, Issue.44
, pp. 15797-15802
-
-
Grazulis, S.1
Manakova, E.2
Roessle, M.3
Bochtler, M.4
Tamulaitiene, G.5
Huber, R.6
Siksnys, V.7
-
30
-
-
33847784924
-
Site-specific DNA transesterification catalyzed by a restriction enzyme
-
DOI 10.1073/pnas.0608689104
-
Sasnauskas, G., Connolly, B.A., Halford, S.E. and Siksnys, V. (2007) Site-specific DNA transesterification catalyzed by a restriction enzyme. Proc. Natl Acad. Sci. USA, 104, 2115-2120. (Pubitemid 46391361)
-
(2007)
Proceedings of the National Academy of Sciences of the United States of America
, vol.104
, Issue.7
, pp. 2115-2120
-
-
Sasnauskas, G.1
Connolly, B.A.2
Halford, S.E.3
Siksnys, V.4
-
31
-
-
34247886142
-
Novel protein fold discovered in the PabI family of restriction enzymes
-
DOI 10.1093/nar/gkm091
-
Miyazono, K., Watanabe, M., Kosinski, J., Ishikawa, K., Kamo, M., Sawasaki, T., Nagata, K., Bujnicki, J.M., Endo, Y., Tanokura, M. et al. (2007) Novel protein fold discovered in the PabI family of restriction enzymes. Nucleic Acids Res., 35, 1908-1918. (Pubitemid 47061659)
-
(2007)
Nucleic Acids Research
, vol.35
, Issue.6
, pp. 1908-1918
-
-
Miyazono, K.-I.1
Watanabe, M.2
Kosinski, J.3
Ishikawa, K.4
Kamo, M.5
Sawasaki, T.6
Nagata, K.7
Bujnicki, J.M.8
Endo, Y.9
Tanokura, M.10
Kobayashi, I.11
-
32
-
-
34047150780
-
-
Springer Berlin
-
Belfort, M., Stoddard, B.L., Wood, D.W. and Derbyshire, V. (2005) Homing Endonucleases and Inteins. Springer, Berlin.
-
(2005)
Homing Endonucleases and Inteins.
-
-
Belfort, M.1
Stoddard, B.L.2
Wood, D.W.3
Derbyshire, V.4
-
34
-
-
0019376425
-
DNA topoisomerases
-
Gellert, M. (1981) DNA topoisomerases. Annu. Rev. Biochem., 50, 879-910.
-
(1981)
Annu. Rev. Biochem.
, vol.50
, pp. 879-910
-
-
Gellert, M.1
-
35
-
-
0030886293
-
Structure of Cre recombinase complexed with DNA in a site-specific recombination synapse
-
DOI 10.1038/37925
-
Guo, F., Gopaul, D.N. and van Duyne, G.D. (1997) Structure of Cre recombinase complexed with DNA in a site-specific recombination synapse. Nature, 389, 40-46. (Pubitemid 27387683)
-
(1997)
Nature
, vol.389
, Issue.6646
, pp. 40-46
-
-
Guo, F.1
Gopaul, D.N.2
Van Duyne, G.D.3
-
37
-
-
0027439390
-
Atomic structures of the human immunophilin FKBP-12 complexes with FK506 and rapamycin
-
DOI 10.1006/jmbi.1993.1012
-
Van Duyne, G.D., Standaert, R.F., Karplus, P.A., Schreiber, S.L. and Clardy, J. (1993) Atomic structures of the human immunophilin FKBP-12 complexes with FK506 and rapamycin. J. Mol. Biol., 229, 105-124. (Pubitemid 23037917)
-
(1993)
Journal of Molecular Biology
, vol.229
, Issue.1
, pp. 105-124
-
-
Van Duyne, G.D.1
Standaert, R.F.2
Karplus, P.A.3
Schreiber, S.L.4
Clardy, J.5
-
40
-
-
0028103275
-
The CCP4 suite: Programs for protein crystallography
-
Collaborative Computational Project Number 4.
-
Collaborative Computational Project Number 4. (1994) The CCP4 suite: programs for protein crystallography. Acta. Crystallogr. D Biol. Crystallogr., 50, 760-763.
-
(1994)
Acta. Crystallogr. D Biol. Crystallogr.
, vol.50
, pp. 760-763
-
-
-
41
-
-
0002583957
-
DM: An automated procedure for phase improvement by density modification. Joint CCP4 ESF-EACBM Newslett
-
Cowtan, K. (1994) DM: an automated procedure for phase improvement by density modification. Joint CCP4 ESF-EACBM Newslett. Protein Crystallogr., 31, 34-38.
-
(1994)
Protein Crystallogr.
, vol.31
, pp. 34-38
-
-
Cowtan, K.1
-
42
-
-
0347383760
-
ARP/wARP and Automatic Interpretation of Protein Electron Density Maps
-
DOI 10.1016/S0076-6879(03)74011-7
-
Morris, R.J., Perrakis, A. and Lamzin, V.S. (2003) ARP/wARP and automatic interpretation of protein electron density maps. Methods Enzymol., 374, 229-244. (Pubitemid 37531812)
-
(2003)
Methods in Enzymology
, vol.374
, pp. 229-244
-
-
Morris, R.J.1
Perrakis, A.2
Lamzin, V.S.3
-
43
-
-
0242396923
-
3DNA: A software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures
-
DOI 10.1093/nar/gkg680
-
Lu, X.J. and Olson, W.K. (2003) 3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures. Nucleic Acids Res., 31, 5108-5121. (Pubitemid 37441878)
-
(2003)
Nucleic Acids Research
, vol.31
, Issue.17
, pp. 5108-5121
-
-
Lu, X.-J.1
Olson, W.K.2
-
44
-
-
77949535720
-
Features and development of Coot
-
Emsley, P., Lohkamp, B., Scott, W.G. and Cowtan, K. (2010) Features and development of Coot. Acta. Crystallogr. D Biol. Crystallogr., 66, 486-501.
-
(2010)
Acta. Crystallogr. D Biol. Crystallogr.
, vol.66
, pp. 486-501
-
-
Emsley, P.1
Lohkamp, B.2
Scott, W.G.3
Cowtan, K.4
-
45
-
-
0032790081
-
XtalView/Xfit - A versatile program for manipulating atomic coordinates and electron density
-
DOI 10.1006/jsbi.1999.4094
-
McRee, D.E. (1999) XtalView/Xfit-A versatile program for manipulating atomic coordinates and electron density. J. Struct. Biol., 125, 156-165. (Pubitemid 29402600)
-
(1999)
Journal of Structural Biology
, vol.125
, Issue.2-3
, pp. 156-165
-
-
McRee, D.E.1
-
46
-
-
0030924992
-
Refinement of macromolecular structures by the maximum-likelihood method
-
DOI 10.1107/S0907444996012255
-
Murshudov, G.N., Vagin, A.A. and Dodson, E.J. (1997) Refinement of macromolecular structures by the maximum-likelihood method. Acta. Crystallogr. D Biol. Crystallogr., 53, 240-255. (Pubitemid 27235885)
-
(1997)
Acta Crystallographica Section D: Biological Crystallography
, vol.53
, Issue.3
, pp. 240-255
-
-
Murshudov, G.N.1
Vagin, A.A.2
Dodson, E.J.3
-
47
-
-
34047245428
-
A Sliding Restriction Enzyme Pauses
-
DOI 10.1016/j.str.2007.04.001, PII S0969212607001141
-
Pingoud, A. and Wende, W. (2007) A sliding restriction enzyme pauses. Structure, 15, 391-393. (Pubitemid 46551732)
-
(2007)
Structure
, vol.15
, Issue.4
, pp. 391-393
-
-
Pingoud, A.1
Wende, W.2
-
48
-
-
0036143789
-
Sequence selectivity and degeneracy of a restriction endonuclease mediated by DNA intercalation
-
DOI 10.1038/nsb741
-
Horton, N.C., Dorner, L.F. and Perona, J.J. (2002) Sequence selectivity and degeneracy of a restriction endonuclease mediated by DNA intercalation. Nat. Struct. Biol., 9, 42-47. (Pubitemid 34049178)
-
(2002)
Nature Structural Biology
, vol.9
, Issue.1
, pp. 42-47
-
-
Horton, N.C.1
Dorner, L.F.2
Perona, J.J.3
-
49
-
-
0030046809
-
Intercalation, DNA kinking, and the control of transcription
-
Werner, M.H., Gronenborn, A.M. and Clore, G.M. (1996) Intercalation, DNA kinking, and the control of transcription. Science, 271, 778-784. (Pubitemid 26058927)
-
(1996)
Science
, vol.271
, Issue.5250
, pp. 778-784
-
-
Werner, M.H.1
Gronenborn, A.M.2
Clore, G.M.3
-
50
-
-
0033528762
-
A new method for determining the stereochemistry of DNA cleavage reactions: Application to the SfiI and HpaII restriction endonucleases and to the MuA transposase
-
Mizuuchi, K., Nobbs, T.J., Halford, S.E., Adzuma, K. and Qin, J. (1999) A new method for determining the stereochemistry of DNA cleavage reactions: application to the SfiI and HpaII restriction endonucleases and to the MuA transposase. Biochemistry, 38, 4640-4648.
-
(1999)
Biochemistry
, vol.38
, pp. 4640-4648
-
-
Mizuuchi, K.1
Nobbs, T.J.2
Halford, S.E.3
Adzuma, K.4
Qin, J.5
-
51
-
-
0032708112
-
A novel endonuclease mechanism directly visualized for I-PpoI
-
Galburt, E.A., Chevalier, B., Tang, W., Jurica, M.S., Flick, K.E., Monnat, R.J. Jr and Stoddard, B.L. (1999) A novel endonuclease mechanism directly visualized for I-PpoI. Nat. Struct. Biol., 6, 1096-1099.
-
(1999)
Nat. Struct. Biol.
, vol.6
, pp. 1096-1099
-
-
Galburt, E.A.1
Chevalier, B.2
Tang, W.3
Jurica, M.S.4
Flick, K.E.5
Monnat Jr., R.J.6
Stoddard, B.L.7
-
52
-
-
77953604755
-
Unusual target site disruption by the rare-cutting HNH restriction endonuclease PacI
-
Shen, B.W., Heiter, D.F., Chan, S.H., Wang, H., Xu, S.Y., Morgan, R.D., Wilson, G.G. and Stoddard, B.L. (2010) Unusual target site disruption by the rare-cutting HNH restriction endonuclease PacI. Structure, 18, 734-743.
-
(2010)
Structure
, vol.18
, pp. 734-743
-
-
Shen, B.W.1
Heiter, D.F.2
Chan, S.H.3
Wang, H.4
Xu, S.Y.5
Morgan, R.D.6
Wilson, G.G.7
Stoddard, B.L.8
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