Ubiquitination of mRNA cycling sequence binding protein from Leishmania donovani (LdCSBP) modulates the RNA endonuclease activity of its Smr domain

FEBS Letters

Volumn 585, Issue 5, 2011, Pages 809-813

  Bhandari, Dipankar ^a   Guha, Kasturi ^a   Bhaduri, Nipa ^a   Saha, Partha ^a  

^a SAHA INSTITUTE OF NUCLEAR PHYSICS   (India)

Author keywords

CCCH Zn finger; Leishmania donovani; mRNA turnover; RNA endonuclease; Smr domain; Ubiquitination

Indexed keywords

BINDING PROTEIN; CYCLING SEQUENCE BINDING PROTEIN; DEOXYRIBONUCLEASE; ENDONUCLEASE; MESSENGER RNA; RNA ENDONUCLEASE; UNCLASSIFIED DRUG;

ARTICLE; CELL CYCLE S PHASE; CONTROLLED STUDY; DOWN REGULATION; ENZYME ACTIVITY; LEISHMANIA DONOVANI; NONHUMAN; NUCLEOTIDE SEQUENCE; PRIORITY JOURNAL; PROTEIN DOMAIN; PROTEIN RNA BINDING; PROTEIN STRUCTURE; REGULATORY MECHANISM; RNA CLEAVAGE; RNA DEGRADATION; SMALL MUTS RELATED DOMAIN; UBIQUITINATION; UNTRANSLATED REGION;

5' UNTRANSLATED REGIONS; AMINO ACID MOTIFS; AMINO ACID SEQUENCE; DNA, PROTOZOAN; ENDONUCLEASES; LEISHMANIA DONOVANI; MOLECULAR SEQUENCE DATA; POLYUBIQUITIN; PROTEIN BINDING; PROTEIN STRUCTURE, TERTIARY; PROTOZOAN PROTEINS; RIBONUCLEASES; RNA, MESSENGER; RNA, PROTOZOAN; S PHASE; UBIQUITINATION; ZINC FINGERS;

EUKARYOTA; LEISHMANIA DONOVANI; TRYPANOSOMATIDAE;

EID: 79952314299     PISSN: 00145793     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.febslet.2011.02.007     Document Type: Article

References (17)

1. P.J. Blackshear Tristetraprolin and other CCCH tandem zinc-finger proteins in the regulation of mRNA turnover Biochem. Soc. Trans. 30 2002 945 952 (Pubitemid 36002386)
2. R. Mahmood, and D.S. Ray Nuclear extracts of Crithidia fasciculata contain a factor(s) that binds to the 5′-untranslated regions of TOP2 and RPA1 mRNAs containing sequences required for their cell cycle regulation J. Biol. Chem. 273 1998 23729 23734 (Pubitemid 28435704)
3. A. Zick, I. Onn, R. Bezalel, H. Margalit, and J. Shlomai Assigning functions to genes: identification of S-phase expressed genes in Leishmania major based on post-transcriptional control elements Nucleic Acids Res. 33 2005 4235 4242 (Pubitemid 41487282)
4. B. Mittra, and D.S. Ray Presence of a poly(A) binding protein and two proteins with cell cycle-dependent phosphorylation in Crithidia fasciculata mRNA cycling sequence binding protein II Eukaryot. Cell 3 2004 1185 1197 (Pubitemid 39385226)
5. B. Mittra, K.M. Sinha, J.C. Hines, and D.S. Ray Presence of multiple mRNA cycling sequence element-binding proteins in Crithidia fasciculata J. Biol. Chem. 278 2003 26564 26571 (Pubitemid 36876800)
6. R. Mahmood, B. Mittra, J.C. Hines, and D.S. Ray Characterization of the Crithidia fasciculata mRNA cycling sequence binding proteins Mol. Cell Biol. 21 2001 4453 4459 (Pubitemid 32588230)
7. D. Bhandari, and P. Saha mRNA cycling sequence binding protein from Leishmania donovani (LdCSBP) is covalently modified by ubiquitination FEMS Microbiol. Lett. 273 2007 206 213 (Pubitemid 47084009)
8. D. Moreira, and H. Philippe Smr: a bacterial and eukaryotic homologue of the C-terminal region of the MutS2 family Trends Biochem. Sci. 24 1999 298 300 (Pubitemid 29366802)
9. P. Sachadyn Conservation and diversity of MutS proteins Mutat. Res. 2010
10. N. Watanabe, S. Wachi, and T. Fujita Identification and characterization of BCL-3-binding protein: implications for transcription and DNA repair or recombination J. Biol. Chem. 278 2003 26102 26110 (Pubitemid 36835379)
11. N. Siddiqui, M.J. Osborne, D.R. Gallie, and K. Gehring Solution structure of the PABC domain from wheat poly (A)-binding protein: an insight into RNA metabolic and translational control in plants Biochemistry 46 2007 4221 4231 (Pubitemid 46559389)
12. T.E. England, A.G. Bruce, and O.C. Uhlenbeck Specific labeling of 3′ termini of RNA with T4 RNA ligase Methods Enzymol. 65 1980 65 74
13. S. Banerjee, A. Sen, P. Das, and P. Saha Leishmania donovani cyclin 1 (LdCyc1) forms a complex with cell cycle kinase subunit CRK3 (LdCRK3) and is possibly involved in S-phase-related activities FEMS Microbiol. Lett. 256 2006 75 82
14. S. Banerjee, R. Banerjee, R. Das, S. Duttagupta, and P. Saha Isolation, characterization and expression of a cyclin from Leishmania donovani FEMS Microbiol. Lett. 226 2003 285 289 (Pubitemid 38444953)
15. S.C. Shih, G. Prag, S.A. Francis, M.A. Sutanto, J.H. Hurley, and L. Hicke A ubiquitin-binding motif required for intramolecular monoubiquitylation, the CUE domain Embo J. 22 2003 1273 1281 (Pubitemid 36362691)
16. D. Mukhopadhyay, and H. Riezman Proteasome-independent functions of ubiquitin in endocytosis and signaling Science 315 2007 201 205 (Pubitemid 46166358)
17. S. Kramer, N.C. Kimblin, and M. Carrington Genome-wide in silico screen for CCCH-type zinc finger proteins of Trypanosoma brucei, Trypanosoma cruzi and Leishmania major BMC Genomics 11 2010 283