-
1
-
-
23944492134
-
Overview of the HUPO Plasma Proteome Project: Results from the pilot phase with 35 collaborating laboratories and multiple analytical groups, generating a core dataset of 3020 proteins and a publicly-available database
-
Omenn GS, States DJ, Adamski M, Blackwell TW, Menon R, Hermjakob H, Apweiler R, Haab BB, Simpson RJ, Eddes JS, Kapp EA, Moritz RL, Chan DW, Rai AJ, Admon A, Aebersold R, Eng J, Hancock WS, Hefta SA, Meyer H, Paik Y-K, Yoo J-S, Ping P, Pounds J, Adkins J, Qian X, Wang R, Wasinger V, Wu CY, Zhao X, Zeng R, Archakov A, Tsugita A, Beer I, Pandey A, Pisano M, Andrews P, Tammen H, Speicher DW, Hanash SM (2005) Overview of the HUPO Plasma Proteome Project: results from the pilot phase with 35 collaborating laboratories and multiple analytical groups, generating a core dataset of 3020 proteins and a publicly-available database. Proteomics 5:3226–3245
-
(2005)
Proteomics
, vol.5
, pp. 3226-3245
-
-
Omenn, G.S.1
States, D.J.2
Adamski, M.3
Blackwell, T.W.4
Menon, R.5
Hermjakob, H.6
Apweiler, R.7
Haab, B.B.8
Simpson, R.J.9
Eddes, J.S.10
Kapp, E.A.11
Moritz, R.L.12
Chan, D.W.13
Rai, A.J.14
Admon, A.15
Aebersold, R.16
Eng, J.17
Hancock, W.S.18
Hefta, S.A.19
Meyer, H.20
Paik, Y.-K.21
Yoo, J.-S.22
Ping, P.23
Pounds, J.24
Adkins, J.25
Qian, X.26
Wang, R.27
Wasinger, V.28
Wu, C.Y.29
Zhao, X.30
Zeng, R.31
Archakov, A.32
Tsugita, A.33
Beer, I.34
Pandey, A.35
Pisano, M.36
Andrews, P.37
Tammen, H.38
Speicher, D.W.39
Hanash, S.M.40
more..
-
2
-
-
33749248174
-
HUPO Brain Proteome Project: Summary of the pilot phase and introduction of a comprehensive data reprocessing strategy
-
Hamacher M, Apweiler R, Arnold G, Becker A, Bluggel M, Carrette O, Colvis C, Dunn MJ, Frohlich T, Fountoulakis M, van Hall A, Herberg F, Ji J, Kretzschmar H, Lewczuk P, Lubec G, Marcus K, Martens L, Palacios Bustamante N, Park YM, Pennington SR, Robben J, Stühler K, Reidegeld KA, Riederer P, Rossier J, Sanchez J-C, Schrader M, Stephan C, Tagle D, Thiele H, Wang J, Wiltfang J, Yoo JS, Zhang C, Klose J, Meyer HE (2006) HUPO Brain Proteome Project: summary of the pilot phase and introduction of a comprehensive data reprocessing strategy. Proteomics 6:4890–4898
-
(2006)
Proteomics
, vol.6
, pp. 4890-4898
-
-
Hamacher, M.1
Apweiler, R.2
Arnold, G.3
Becker, A.4
Bluggel, M.5
Carrette, O.6
Colvis, C.7
Dunn, M.J.8
Frohlich, T.9
Fountoulakis, M.10
van Hall, A.11
Herberg, F.12
Ji, J.13
Kretzschmar, H.14
Lewczuk, P.15
Lubec, G.16
Marcus, K.17
Martens, L.18
Palacios Bustamante, N.19
Park, Y.M.20
Pennington, S.R.21
Robben, J.22
Stühler, K.23
Reidegeld, K.A.24
Riederer, P.25
Rossier, J.26
Sanchez, J.-C.27
Schrader, M.28
Stephan, C.29
Tagle, D.30
Thiele, H.31
Wang, J.32
Wiltfang, J.33
Yoo, J.S.34
Zhang, C.35
Klose, J.36
Meyer, H.E.37
more..
-
3
-
-
70349091863
-
A guide to the Proteomics Identifications Database proteomics data repository
-
Vizcaino JA, Cote R, Reisinger F, Foster JM, Mueller M, Rameseder J, Hermjakob H, Martens L (2009) A guide to the Proteomics Identifications Database proteomics data repository. Proteomics 9:4276–4283
-
(2009)
Proteomics
, vol.9
, pp. 4276-4283
-
-
Vizcaino, J.A.1
Cote, R.2
Reisinger, F.3
Foster, J.M.4
Mueller, M.5
Rameseder, J.6
Hermjakob, H.7
Martens, L.8
-
4
-
-
34249062964
-
The minimum information about a proteomics experiment (MIAPE)
-
Taylor CF, Paton NW, Lilley KS, Binz P-A, Julian RK Jr, Jones AR, Zhu W, Apweiler R, Aebersold R, Deutsch EW, Dunn MJ, Heck AJ, Leitner A, Macht M, Mann M, Martens L, Neubert TA, Patterson SD, Ping P, Seymour SL, Souda P, Tsugita A, Vandekerckhove J, Vondriska TM, Whitelegge JP, Wilkins MR, Xenarios I, Yates JR III, Hermjakob H (2007) The minimum information about a proteomics experiment (MIAPE). Nat Biotechnol 25:887–893
-
(2007)
Nat Biotechnol
, vol.25
, pp. 887-893
-
-
Taylor, C.F.1
Paton, N.W.2
Lilley, K.S.3
Binz, P.-A.4
Julian, R.K.5
Jones, A.R.6
Zhu, W.7
Apweiler, R.8
Aebersold, R.9
Deutsch, E.W.10
Dunn, M.J.11
Heck, A.J.12
Leitner, A.13
Macht, M.14
Mann, M.15
Martens, L.16
Neubert, T.A.17
Patterson, S.D.18
Ping, P.19
Seymour, S.L.20
Souda, P.21
Tsugita, A.22
Vandekerckhove, J.23
Vondriska, T.M.24
Whitelegge, J.P.25
Wilkins, M.R.26
Xenarios, I.27
Yates, J.R.28
Hermjakob, H.29
more..
-
5
-
-
34547141606
-
The PSI formal document process and its implementation on the PSI website
-
Vizcaino JA, Martens L, Hermjakob H, Julian RK, Paton NW (2007) The PSI formal document process and its implementation on the PSI website. Proteomics 7:2355–2357
-
(2007)
Proteomics
, vol.7
, pp. 2355-2357
-
-
Vizcaino, J.A.1
Martens, L.2
Hermjakob, H.3
Julian, R.K.4
Paton, N.W.5
-
6
-
-
45749118607
-
Promoting coherent minimum reporting guidelines for biological and biomedical investigations: The MIBBI project
-
Taylor CF, Field D, Sansone SA, Aerts J, Apweiler R, Ashburner M, Ball CA, Binz P-A, Bogue M, Booth T, Brazma A, Brinkman RR, Michael Clark A, Deutsch EW, Fiehn O, Fostel J, Ghazal P, Gibson F, Gray T, Grimes G, Hancock JM, Hardy NW, Hermjakob H, Julian RK, Kane M, Kettner C, Kinsinger C, Kolker E, Kuiper M, Le Novère N, Leebens-Mack J, Lewis SE, Lord P, Mallon A-M, Marthandan N, Masuya H, McNally R, Mehrle A, Morrison N, Orchard S, Quackenbush J, Reecy JM, Robertson DG, Rocca-Serra P, Rodriguez H, Rosenfelder H, Santoyo-Lopez J, Scheuermann RH, Schober D, Smith B, Snape J, Stoeckert CJ, Tipton K, Sterk P, Untergasser A, Vandesompele J, Wiemann S (2008) Promoting coherent minimum reporting guidelines for biological and biomedical investigations: the MIBBI project. Nat Biotechnol 26:889–896
-
(2008)
Nat Biotechnol
, vol.26
, pp. 889-896
-
-
Taylor, C.F.1
Field, D.2
Sansone, S.A.3
Aerts, J.4
Apweiler, R.5
Ashburner, M.6
Ball, C.A.7
Binz, P.-A.8
Bogue, M.9
Booth, T.10
Brazma, A.11
Brinkman, R.R.12
Michael Clark, A.13
Deutsch, E.W.14
Fiehn, O.15
Fostel, J.16
Ghazal, P.17
Gibson, F.18
Gray, T.19
Grimes, G.20
Hancock, J.M.21
Hardy, N.W.22
Hermjakob, H.23
Julian, R.K.24
Kane, M.25
Kettner, C.26
Kinsinger, C.27
Kolker, E.28
Kuiper, M.29
Le Novère, N.30
Leebens-Mack, J.31
Lewis, S.E.32
Lord, P.33
Mallon, A.-M.34
Marthandan, N.35
Masuya, H.36
McNally, R.37
Mehrle, A.38
Morrison, N.39
Orchard, S.40
Quackenbush, J.41
Reecy, J.M.42
Robertson, D.G.43
Rocca-Serra, P.44
Rodriguez, H.45
Rosenfelder, H.46
Santoyo-Lopez, J.47
Scheuermann, R.H.48
Schober, D.49
Smith, B.50
Snape, J.51
Stoeckert, C.J.52
Tipton, K.53
Sterk, P.54
Untergasser, A.55
Vandesompele, J.56
Wiemann, S.57
more..
-
7
-
-
35948989284
-
The OBO Foundry: Coordinated evolution of ontologies to support biomedical data integration
-
Smith B, Ashburner M, Rosse C, Bard J, Bug W, Ceusters W, Goldberg LJ, Eilbeck K, Ireland A, Mungall CJ; OBI Consortium, Leontis N, Rocca-Serra P, Ruttenberg A, Sansone SA, Scheuermann RH, Shah N, Whetzel PL, Lewis S (2007) The OBO Foundry: coordinated evolution of ontologies to support biomedical data integration. Nat Biotechnol 25:1251–1255
-
(2007)
Nat Biotechnol
, vol.25
, pp. 1251-1255
-
-
Smith, B.1
Ashburner, M.2
Rosse, C.3
Bard, J.4
Bug, W.5
Ceusters, W.6
Goldberg, L.J.7
Eilbeck, K.8
Ireland, A.9
Mungall, C.J.10
Obi Consortium, L.N.11
Rocca-Serra, P.12
Ruttenberg, A.13
Sansone, S.A.14
Scheuermann, R.H.15
Shah, N.16
Whetzel, P.L.17
Lewis, S.18
-
8
-
-
8344284323
-
A common open representation of mass spectrometry data and its application to proteomics research
-
Pedrioli PG, Eng JK, Hubley R, Vogelzang M, Deutsch EW, Raught B, Pratt B, Nilsson E, Angeletti RH, Apweiler R, Cheung K, Costello CE, Hermjakob H, Huang S, Julian RK, Kapp E, McComb ME, Oliver SG, Omenn G, Paton NW, Simpson R, Smith R, Taylor CF, Zhu W, Aebersold R (2004) A common open representation of mass spectrometry data and its application to proteomics research. Nat Biotechnol 22:1459–1466
-
(2004)
Nat Biotechnol
, vol.22
, pp. 1459-1466
-
-
Pedrioli, P.G.1
Eng, J.K.2
Hubley, R.3
Vogelzang, M.4
Deutsch, E.W.5
Raught, B.6
Pratt, B.7
Nilsson, E.8
Angeletti, R.H.9
Apweiler, R.10
Cheung, K.11
Costello, C.E.12
Hermjakob, H.13
Huang, S.14
Julian, R.K.15
Kapp, E.16
McComb, M.E.17
Oliver, S.G.18
Omenn, G.19
Paton, N.W.20
Simpson, R.21
Smith, R.22
Taylor, C.F.23
Zhu, W.24
Aebersold, R.25
more..
-
9
-
-
70350222198
-
Annual Spring Meeting of the Proteomics Standards Initiative, 27-29 April 2009, Turku
-
Orchard S, Deutsch EW, Binz PA, Jones AR, Creasy D, Montechi-Palazzi L, Corthals G, Hermjakob H (2009) Annual Spring Meeting of the Proteomics Standards Initiative, 27-29 April 2009, Turku, Finland. Proteomics 9:4429–4432
-
(2009)
Finland. Proteomics
, vol.9
, pp. 4429-4432
-
-
Orchard, S.1
Deutsch, E.W.2
Binz, P.A.3
Jones, A.R.4
Creasy, D.5
Montechi-Palazzi, L.6
Corthals, G.7
Hermjakob, H.8
-
11
-
-
49449096589
-
Guidelines for reporting the use of mass spectrometry informatics in proteomics
-
Binz P-A, Barkovich R, Beavis RC, Creasy D, Horn DM, Julian RK Jr, Seymour SL, Taylor CF, Vandenbrouck Y (2008) Guidelines for reporting the use of mass spectrometry informatics in proteomics. Nat Biotechnol 26:862
-
(2008)
Nat Biotechnol
, vol.26
, pp. 862
-
-
Binz, P.-A.1
Barkovich, R.2
Beavis, R.C.3
Creasy, D.4
Horn, D.M.5
Julian, R.K.6
Seymour, S.L.7
Taylor, C.F.8
Vandenbrouck, Y.9
-
12
-
-
58149191270
-
The Universal Protein Resource (UniProt) 2009
-
The UniProt Consortium (2009) The Universal Protein Resource (UniProt) 2009. Nucleic Acids Res 37:169–174
-
(2009)
Nucleic Acids Res
, vol.37
, pp. 169-174
-
-
-
13
-
-
3042818018
-
The International Protein Index: An integrated database for proteomics experiments
-
Kersey PJ, Duarte J, Williams A, Karavidopoulou Y, Birney E, Apweiler R (2004) The International Protein Index: an integrated database for proteomics experiments. Proteomics 4:1985–1988
-
(2004)
Proteomics
, vol.4
, pp. 1985-1988
-
-
Kersey, P.J.1
Duarte, J.2
Williams, A.3
Karavidopoulou, Y.4
Birney, E.5
Apweiler, R.6
-
14
-
-
49449091860
-
Guidelines for reporting the use of gel electrophoresis in proteomics
-
Gibson F, Anderson L, Babnigg G, Baker M, Berth M, Binz P-A, Borthwick A, Cash P, Day BW, Friedman DB, Garland D, Gutstein B, Hoogland C, Jones NA, Khan A, Klose J, Lamond AI, Lemkin PF, Lilley KS, Minden J, Morris NJ, Paton NW, Pisano MR, Prime JE, Rabilloud T, Stead DA, Taylor CF, Voshol H, Wipat A, Jones AR (2008) Guidelines for reporting the use of gel electrophoresis in proteomics. Nat Biotechnol 26:863–864
-
(2008)
Nat Biotechnol
, vol.26
, pp. 863-864
-
-
Gibson, F.1
Anderson, L.2
Babnigg, G.3
Baker, M.4
Berth, M.5
Binz, P.-A.6
Borthwick, A.7
Cash, P.8
Day, B.W.9
Friedman, D.B.10
Garland, D.11
Gutstein, B.12
Hoogland, C.13
Jones, N.A.14
Khan, A.15
Klose, J.16
Lamond, A.I.17
Lemkin, P.F.18
Lilley, K.S.19
Minden, J.20
Morris, N.J.21
Paton, N.W.22
Pisano, M.R.23
Prime, J.E.24
Rabilloud, T.25
Stead, D.A.26
Taylor, C.F.27
Voshol, H.28
Wipat, A.29
Jones, A.R.30
more..
-
15
-
-
46249097440
-
MIAPEGelDB, a web-based submission tool and public repository for MIAPE gel electrophoresis documents
-
Robin X, Hoogland C, Appel RD, Lisacek F (2009) MIAPEGelDB, a web-based submission tool and public repository for MIAPE gel electrophoresis documents. J Proteomics 71:249–251
-
(2009)
J Proteomics
, vol.71
, pp. 249-251
-
-
Robin, X.1
Hoogland, C.2
Appel, R.D.3
Lisacek, F.4
-
16
-
-
0742323374
-
The HUPO PSI’s molecular interaction for-mat–a community standard for the representation of protein interaction data
-
Hermjakob H, Montecchi-Palazzi L, Bader G, Wojcik J, Salwinski L, Ceol A, Moore S, Orchard S, Sarkans U, von Mering C, Roechert B, Poux S, Jung E, Mersch H, Kersey P, Lappe M, Li Y, Zeng R, Rana D, Nikolski M, Husi H, Brun C, Shanker K, Grant SG, Sander C, Bork P, Zhu W, Pandey A, Brazma A, Jacq B, Vidal M, Sherman D, Legrain P, Cesareni G, Xenarios I, Eisenberg D, Steipe B, Hogue C, Apweiler R (2004) The HUPO PSI’s molecular interaction for-mat–a community standard for the representation of protein interaction data. Nat Biotechnol 22:177–183
-
(2004)
Nat Biotechnol
, vol.22
, pp. 177-183
-
-
Hermjakob, H.1
Montecchi-Palazzi, L.2
Bader, G.3
Wojcik, J.4
Salwinski, L.5
Ceol, A.6
Moore, S.7
Orchard, S.8
Sarkans, U.9
von Mering, C.10
Roechert, B.11
Poux, S.12
Jung, E.13
Mersch, H.14
Kersey, P.15
Lappe, M.16
Li, Y.17
Zeng, R.18
Rana, D.19
Nikolski, M.20
Husi, H.21
Brun, C.22
Shanker, K.23
Grant, S.G.24
Sander, C.25
Bork, P.26
Zhu, W.27
Pandey, A.28
Brazma, A.29
Jacq, B.30
Vidal, M.31
Sherman, D.32
Legrain, P.33
Cesareni, G.34
Xenarios, I.35
Eisenberg, D.36
Steipe, B.37
Hogue, C.38
Apweiler, R.39
more..
-
17
-
-
35348976204
-
Broadening the horizon–level 2.5 of the HUPO-PSI format for molecular interactions
-
Kerrien S, Orchard S, Montecchi-Palazzi L, Aranda B, Quinn AF, Vinod N, Bader G, Xenarios I, Wojcik J, Sherman D, Tyers M, Salama JJ, Moore S, Ceol A, Chatr-aryamontri A, Oesterheld M, Stümpflen V, Salwinski L, Nerothin J, Cerami E, Cusick ME, Vidal M, Gilson M, Armstrong J, Woollard P, Hogue C, Eisenberg D, Cesareni G, Apweiler R, Hermjakob H (2007) Broadening the horizon–level 2.5 of the HUPO-PSI format for molecular interactions. BMC Bioinform 5:44
-
(2007)
BMC Bioinform
, vol.5
-
-
Kerrien, S.1
Orchard, S.2
Montecchi-Palazzi, L.3
Aranda, B.4
Quinn, A.F.5
Vinod, N.6
Bader, G.7
Xenarios, I.8
Wojcik, J.9
Sherman, D.10
Tyers, M.11
Salama, J.J.12
Moore, S.13
Ceol, A.14
Chatr-Aryamontri, A.15
Oesterheld, M.16
Stümpflen, V.17
Salwinski, L.18
Nerothin, J.19
Cerami, E.20
Cusick, M.E.21
Vidal, M.22
Gilson, M.23
Armstrong, J.24
Woollard, P.25
Hogue, C.26
Eisenberg, D.27
Cesareni, G.28
Apweiler, R.29
Hermjakob, H.30
more..
-
18
-
-
58749115239
-
Exploring biological networks with Cytoscape software
-
Yeung N, Cline MS, Kuchinsky A, Smoot ME, Bader GD (2008) Exploring biological networks with Cytoscape software. Curr Protoc Bioinformatics 8 unit 8.13
-
(2008)
Curr Protoc Bioinformatics 8 Unit
, vol.8
, pp. 13
-
-
Yeung, N.1
Cline, M.S.2
Kuchinsky, A.3
Smoot, M.E.4
Bader, G.D.5
-
19
-
-
64749102604
-
A general pipeline for quality and statistical assessment of protein interaction data using R and Bioconductor
-
Chiang T, Scholtens D (2009) A general pipeline for quality and statistical assessment of protein interaction data using R and Bioconductor. Nat Protoc 4:535–546
-
(2009)
Nat Protoc
, vol.4
, pp. 535-546
-
-
Chiang, T.1
Scholtens, D.2
-
20
-
-
34249107988
-
The GO Consortium, Gilson M, Hogue C, Mewes H-W, Apweiler R, Xenarios I, Eisenberg D, Cesareni G, Hermjakob H
-
Orchard S, Salwinski L, Kerrien S, Montecchi-Palazzi L, Oesterheld M, Stümpflen V, Ceol A, Chatr-aryamontri A, Armstrong J, Woollard P, Salama JJ, Moore S, Wojcik J, Bader GD, Vidal M, Gerstein M, Gavin A-C, Superti-Furga G, Greenblatt J, Bader J, Uetz P, Tyers M, Legrain P, Fields S, The GO Consortium, Gilson M, Hogue C, Mewes H-W, Apweiler R, Xenarios I, Eisenberg D, Cesareni G, Hermjakob H (2007) The minimum information required for reporting a molecular interaction experiment (MIMIx). Nat Biotechnol 25:894–898
-
(2007)
The Minimum Information Required for Reporting a Molecular Interaction Experiment (Mimix). Nat Biotechnol
, vol.25
, pp. 894-898
-
-
Orchard, S.1
Salwinski, L.2
Kerrien, S.3
Montecchi-Palazzi, L.4
Oesterheld, M.5
Stümpflen, V.6
Ceol, A.7
Chatr-Aryamontri, A.8
Armstrong, J.9
Woollard, P.10
Salama, J.J.11
Moore, S.12
Wojcik, J.13
Bader, G.D.14
Vidal, M.15
Gerstein, M.16
Gavin, A.-C.17
Superti-Furga, G.18
Greenblatt, J.19
Bader, J.20
Uetz, P.21
Tyers, M.22
Legrain, P.23
Fields, S.24
more..
-
21
-
-
41649106470
-
Submit your interaction data the IMEx way-a step by step guide to trouble-free deposition
-
Orchard S, Kerrien S, Jones P, Ceol A, Chatr-aryamontri A, Salwinski L, Nerothin J, Hermjakob H (2007) Submit your interaction data the IMEx way-a step by step guide to trouble-free deposition. Pract Proteomics 7:28–34
-
(2007)
Pract Proteomics
, vol.7
, pp. 28-34
-
-
Orchard, S.1
Kerrien, S.2
Jones, P.3
Ceol, A.4
Chatr-Aryamontri, A.5
Salwinski, L.6
Nerothin, J.7
Hermjakob, H.8
-
22
-
-
75549087047
-
The IntAct Molecular Interaction Database in 2010
-
Aranda B, Achuthan P, Alam-Faruque Y, Armean I, Bridge A, Derow C, Feuermann M, Kerrien S, Khadake J, Kerssemakers J, Leroy C, Menden M, Michaut M, Montecchi-Palazzi L, Neuhauser SN, Orchard S, Perreau V, Roechert B, Tashakkori A, van Eijk K, Hermjakob H (2010) The IntAct Molecular Interaction Database in 2010. Nucleic Acid Res 38:525–531
-
(2010)
Nucleic Acid Res
, vol.38
, pp. 525-531
-
-
Aranda, B.1
Achuthan, P.2
Alam-Faruque, Y.3
Armean, I.4
Bridge, A.5
Derow, C.6
Feuermann, M.7
Kerrien, S.8
Khadake, J.9
Kerssemakers, J.10
Leroy, C.11
Menden, M.12
Michaut, M.13
Montecchi-Palazzi, L.14
Neuhauser, S.N.15
Orchard, S.16
Perreau, V.17
Roechert, B.18
Tashakkori, A.19
van Eijk, K.20
Hermjakob, H.21
more..
-
23
-
-
0036088133
-
DIP: The database of interacting proteins. A research tool for studying cellular networks of protein interactions
-
Xenarios I, Salwinski L, Duan XJ, Higney P, Kim S, Eisenberg D (2002) DIP: The database of interacting proteins. A research tool for studying cellular networks of protein interactions. Nucleic Acids Res 30:303–305
-
(2002)
Nucleic Acids Res
, vol.30
, pp. 303-305
-
-
Xenarios, I.1
Salwinski, L.2
Duan, X.J.3
Higney, P.4
Kim, S.5
Eisenberg, D.6
-
24
-
-
33846073818
-
MINT: The Molecular INTeraction database
-
Chatr-aryamontri A, Ceol A, Palazzi LM, Nardelli G, Schneider MV, Castagnoli L, Cesareni G (2007) MINT: the Molecular INTeraction database. Nucleic Acids Res 35:572–574
-
(2007)
Nucleic Acids Res
, vol.35
, pp. 572-574
-
-
Chatr-Aryamontri, A.1
Ceol, A.2
Palazzi, L.M.3
Nardelli, G.4
Schneider, M.V.5
Castagnoli, L.6
Cesareni, G.7
-
25
-
-
61449243886
-
MatrixDB, a database focused on extracellular protein-protein and protein-carbohydrate interactions
-
Chautard E, Ballut L, Thierry-Mieg N, Ricard-Blum S (2009) MatrixDB, a database focused on extracellular protein-protein and protein-carbohydrate interactions. Bioinformatics 25:690–691
-
(2009)
Bioinformatics
, vol.25
, pp. 690-691
-
-
Chautard, E.1
Ballut, L.2
Thierry-Mieg, N.3
Ricard-Blum, S.4
-
26
-
-
48249112175
-
MPIDB: The microbial protein interaction database
-
Goll J, Rajagopala SV, Shiau SC, Wu H, Lamb BT, Uetz P (2008) MPIDB: the microbial protein interaction database. Bioinformatics 24:1743–1744
-
(2008)
Bioinformatics
, vol.24
, pp. 1743-1744
-
-
Goll, J.1
Rajagopala, S.V.2
Shiau, S.C.3
Wu, H.4
Lamb, B.T.5
Uetz, P.6
-
27
-
-
33644878150
-
MPact: The MIPS protein interaction resource on yeast
-
Guldener U, Munsterkotter M, Oesterheld M, Pagel P, Ruepp A, Mewes HW, Stumpflen V (2006) MPact: the MIPS protein interaction resource on yeast. Nucleic Acids Res 34:d436–d441
-
(2006)
Nucleic Acids Res
, vol.34
, pp. d436-d441
-
-
Guldener, U.1
Munsterkotter, M.2
Oesterheld, M.3
Pagel, P.4
Ruepp, A.5
Mewes, H.W.6
Stumpflen, V.7
-
28
-
-
67650394443
-
Ending the “publish and vanish” culture: How the data standardization process will assist in data harvesting
-
Orchard S (2009) Ending the “publish and vanish” culture: how the data standardization process will assist in data harvesting. J Proteome Res 8:3219
-
(2009)
J Proteome Res
, vol.8
, pp. 3219
-
-
Orchard, S.1
-
29
-
-
70949084590
-
The PSI semantic validator: A framework to check MIAPE compliance of proteomics data
-
Montecchi-Palazzi L, Kerrien S, Reisinger F, Aranda B, Jones AR, Martens L, Hermjakob H (2009) The PSI semantic validator: a framework to check MIAPE compliance of proteomics data. Proteomics 9:5112–5119
-
(2009)
Proteomics
, vol.9
, pp. 5112-5119
-
-
Montecchi-Palazzi, L.1
Kerrien, S.2
Reisinger, F.3
Aranda, B.4
Jones, A.R.5
Martens, L.6
Hermjakob, H.7
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