Microbial community structure and enzyme activities in a sequence of copper-polluted soils

Pedosphere

Volumn 21, Issue 2, 2011, Pages 164-169

  Ge, Chao Rong ^a   Zhang, Qi Chun ^a  

^a ZHEJIANG UNIVERSITY   (China)

Author keywords

Archaea; Bacteria; Fungi; Multiplex terminal restriction fragment length polymorphism; Phospholipid fatty acid

Indexed keywords

BACTERIUM; COMMUNITY STRUCTURE; CONCENTRATION (COMPOSITION); COPPER; DOSE-RESPONSE RELATIONSHIP; ENZYME ACTIVITY; FATTY ACID; FUNGUS; MICROBIAL COMMUNITY; PADDY FIELD; PHOSPHOLIPID; POLLUTION EFFECT; POLYMORPHISM; SOIL MICROORGANISM; SOIL POLLUTION; TOLERANCE;

CHINA; FUYANG; ZHEJIANG;

ARCHAEA; BACTERIA (MICROORGANISMS); FUNGI; NEGIBACTERIA; POSIBACTERIA;

EID: 79952077722     PISSN: 10020160     EISSN: None     Source Type: Journal    
DOI: 10.1016/S1002-0160(11)60114-8     Document Type: Article

References (33)

1. Alef K., Nannipieri P., Trazar-Cepeda C. Phosphatase activity. Methods in Applied Soil Microbiology and Biochemistry 1995, 335-339. Academic Press, London. K. Alef, P. Nannipieri (Eds.).
2. Bååth E., Diaz-Ravina M., Frostegård A., Campbell C.D. Effect of metal-rich sludge amendments on the soil microbial community. Appl. Environ. Microb. 1998, 64:238245.
3. Bergstrom D.W., Monreal C.M., King D.J. Sensitivity of soil enzyme activities to conservation practices. Soil Sci. Soc. Am. J. 1998, 62:1286-1295.
4. Bligh E.G., Dyer W.M. A rapid method of total lipid extraction and purification. Can. J. Biochem. Physiol. 1959, 39:911-917.
5. Chander K., Brookes P.C. Effects of heavy metals from past applications of sewage sludge on microbial biomass and organic matter accumulation in a sandy loam soil and silty loam UK soil. Soil Biol. Biochem. 1991, 23:927932.
6. Frostegård Å., Tunlid A., Bååth E. Phospholipid fatty acid composition, biomass, and activity of microbial communities from two soil types experimentally exposed to different heavy metals. Appl. Environ. Microb. 1993, 59:36053617.
7. Gianfreda L., Sannino F., Ortefa N., Nannipieri P. Activity of free and immobilized urease in soil: effects of pesticides. Soil Biol. Biochem. 1994, 26:777-784.
8. Giller K.E., Witter E., McGarth S.P. Toxicity of heavy metals to microorganisms and microbial processes in agricultural soils: a review. Soil Biol. Biochem,. 1998, 30:1389-1414.
9. Hamm D., Feger K.H. An optimized method for the determination of protease activity in acid forest soils. Z. Pflanz. Bodenk. 1996, 159:37-39. (in German).
10. Harris J.A., Bentham H., Birch P. Soil microbial community provides index to progress, direction of restoration. Restor. Manage. Notes. 1991, 9:133-135.
11. Kandler O., König H. Cell wall polymers in Archaea (Archaebacteria). Cell. Mol. Life Sci. 1998, 54:305-308.
12. Kelly J.J., Häggblom M.M., Tate R.L. Effects of heavy metal contamination and remediation on soil microbial communities in the vicinity of a zinc smelter as indicated by analysis of microbial community phospholipid fatty acid profiles. Biol. Fert. Soils. 2003, 38:65-71.
13. Knight B., McGrath S.P., Chaudri A.M. Biomass carbon measurements and substrate utilization patterns of microbial populations from soils amended with cadmium, copper, or zinc. Appl. Environ. Microb. 1997, 63:39-43.
14. Kozdroj J. Microbial responses to single or successive soil contamination with Cd or Cu. Soil Biol. Biochem. 1995, 27:1459-1465.
15. Kuperman R.G., Carreiro M.M. Soil heavy metal concentrations, microbial biomass and enzyme activities in a contaminated grassland ecosystem. Soil Biol. Biochem. 1997, 29:179-190.
16. Ladd J.N. Origin and range of enzymes in soil. Soil Enzymes 1978, 51-96. Academic Press, New York. R.G. Burns (Ed.).
17. Liu Z.P. Lead poisoning combined with cadmium in sheep and horses in the vicinity of non-ferrous metal smelters. Sci. Total Environ. 2003, 309:117-126.
18. Macdonald C.A., Campbell C.D., Bacon J.R., Singh B.K. Multiple profiling of soil microbial communities identifies potential genetic markers of metal-enriched sewage sludge. FEMS Microbiol. Ecol. 2008, 65:555-564.
19. Macdonald C.A., Singh B.K., Peck J.A., van Schaik A.P., Hunter L.C., Horswell J., Campbell C.D., Speir T.W. Long-term exposure to Zn-spiked sewage sludge alters soil community structure. Soil Biol. Biochem. 2007, 39:2576-2586.
20. Pennanen T., Frostegård Å., Fritze H., Bååth E. Phospholipid fatty acid composition and heavy metal tolerance of soil microbial communities along two heavy metal polluted gradients in coniferous forest. Appl. Environ. Microb. 1996, 62:420-428.
21. Ranjard L., Echairi A., Nowak V., Lejon D.P.H., Nouaim R., Chaussod R. Field and microcosm experiments to evaluate the effects of agricultural Cu treatment on the density and genetic structure of microbial communities in two different soils. FEMS Microbiol. Ecol. 2006, 58:303-315.
22. Schinner F., von Mersi W. Xylanase-, CM-cellulase- and invertase activity in soil: An improved method. Soil Biol. Biochem. 1990, 22:511-515.
23. Singh B.K., Nazaries L., Munro S., Anderson I.C., Campbell C.D. Use of multiplex terminal restriction fragment length polymorphism for rapid and simultaneous analysis of different components of the soil microbial community. Appl. Environ. Microb. 2006, 72:7278-7285.
24. Sparling G.P. Soil microbial biomass, activity and nutrient cycling as indicators of soil health. Biological Indicators of Soil Health 1997, 97-119. CAB International, New York. C.E. Pankhurst, B.M. Doube, V.V.S.R. Gupta (Eds.).
25. Speir T.W., van Schaik A.P., Hunter L.C., Ryburn J.L., Percival H.J. Attempts to derive EC50 values for heavy metals from land applied Cu-, Ni-, and Zn-spiked sewage sludge. Soil Biol. Biochem. 2007, 39:539-549.
26. Top E., Mergeay M., Springael D., Verstraete W. Gene escape model: Transfer of heavy metal resistance genes from Escherichia coli to Alcaligenes eutrophus on agar plates and in soil samples. Appl. Environ. Microb. 1990, 56:24712479.
27. Torsvik V., Øvreås L. Microbial diversity and funcation in soil: from genes to ecosystems. Curr. Opin. Microbiol. 2002, 5:240-245.
28. Tunlid A., White D.C. Biochemical analysis of biomass, community structure, nutritional status and metabolic activities of microbial communities in soil. Soil Biochemistry 1992, 229-262. Marcel Dekker, New York. G. Stotzky, J.M. Bollag (Eds.).
29. Valentine D.L. Adaptations to energy stress dictate the ecology and evolution of the archaea. Nat. Rev. Microbiol. 2007, 5:316-323.
30. Wang Y., Shi J., Wang H., Lin Q., Chen X., Chen Y. The influence of soil heavy metals pollution on soil microbial biomass, enzyme activity, and community composition near a copper smelter. Ecotox. Environ. Safe. 2007, 67:75-81.
31. Xue D., Yao H.Y., Ge D.Y., Huang C.Y. Soil microbial community structure in diverse land use systems: a comparative study using Biolog, DGGE, and PLFA analyses. Pedosphere. 2008, 18:653-663.
32. Yao H., Xu J., Huang C. Substrate utilization pattern, biomass and activity of microbial communities in a sequence of heavy metal-polluted paddy soils. Geoderma. 2003, 115:139-148.
33. Zhou J., Bruns M.A., Tiedje J.M. DNA recovery from soils of diverse composition. Appl. Environ. Microb. 1996, 62:316-322.