Genetically depauperate in the continent but rich in oceanic islands: Cistus monspeliensis (cistaceae) in the canary islands

PLoS ONE

Volumn 6, Issue 2, 2011, Pages

  Fernández Mazuecos, Mario ^a   Vargas, Pablo ^a  

^a CSIC   (Spain)

Author keywords

[No Author keywords available]

Indexed keywords

PLANT DNA;

ARTICLE; BOTTLENECK POPULATION; CISTUS; CISTUS MONSPELIENSIS; CONTROLLED STUDY; DNA SEQUENCE; GENETIC VARIABILITY; GEOGRAPHIC DISTRIBUTION; GEOGRAPHICAL VARIATION (SPECIES); GLACIATION; HAPLOTYPE; MEDITERRANEAN SEA; MIDDLE PLEISTOCENE; NONHUMAN; OCEANIC REGIONS; PHYLOGENY; PHYLOGEOGRAPHY; PLASTID GENOME; POPULATION GENETICS; SPECIES INTRODUCTION; THERMOPHILE;

CISTUS; GENETIC VARIATION; GEOGRAPHY; HAPLOTYPES; INTRODUCED SPECIES; OCEANS AND SEAS; PHYLOGENY; PHYLOGEOGRAPHY; SPAIN;

CISTACEAE; CISTUS; CISTUS MONSPELIENSIS;

EID: 79951988418     PISSN: None     EISSN: 19326203     Source Type: Journal    
DOI: 10.1371/journal.pone.0017172     Document Type: Article

References (68)

1. Cox CB, Moore PD, (2010) Biogeography: an ecological and evolutionary approach. Hoboken Wiley.
2. Whittaker RJ, Fernández-Palacios JM, (2007) Island biogeography: ecology, evolution and conservation. Oxford Oxford University Press.
3. Emerson BC, (2002) Evolution on oceanic islands: molecular phylogenetic approaches to understanding pattern and process. Molecular Ecology 11: 951-966.
4. Silvertown J, (2004) The ghost of competition past in the phylogeny of island endemic plants. Journal of Ecology 92: 168-173.
5. Emerson BC, Kolm N, (2005) Species diversity can drive speciation. Nature 434: 1015-1017.
6. Carine MA, (2005) Spatio-temporal relationships of the Macaronesian endemic flora: a relictual series or window of opportunity? Taxon 54: 895-903.
7. Stuessy TF, Jakubowsky G, Gomez RS, Pfosser M, Schluter PM, et al. (2006) Anagenetic evolution in island plants. Journal of Biogeography 33: 1259-1265.
8. Vargas P, (2007) Are Macaronesian islands refugia of relict plant lineages?: a molecular survey. In: Weiss S, Ferrand N, editors. Phylogeography of Southern European Refugia Dordrecht Springer pp. 297-314.
9. Frankham R, (1997) Do island populations have less genetic variation than mainland populations? Heredity 78: 311-327.
10. Inoue K, Kawahara T, (1990) Allozyme differentiation and genetic structure in island and mainland Japanese populations of Campanula punctata (Campanulaceae). American Journal of Botany 77: 1440-1448.
11. Dodd SC, Helenurm K, (2002) Genetic diversity in Delphinium variegatum (Ranunculaceae): a comparison of two insular endemic subspecies and their widespread mainland relative. American Journal of Botany 89: 613-622.
12. Rivera-Ocasio E, Aide TM, McMillan WO, (2002) Patterns of genetic diversity and biogeographical history of the tropical wetland tree, Pterocarpus officinalis (Jacq.), in the Caribbean basin. Molecular Ecology 11: 675-683.
13. Chiang YC, Hung KH, Schaal BA, Ge XJ, Hsu TW, et al. (2006) Contrasting phylogeographical patterns between mainland and island taxa of the Pinus luchuensis complex. Molecular Ecology 15: 765-779.
14. García-Verdugo C, Fay MF, Granado-Yela C, Rubio de Casas R, Balaguer L, et al. (2009) Genetic diversity and differentiation processes in the ploidy series of Olea europaea L.: a multiscale approach from subspecies to insular populations. Molecular Ecology 18: 454-467.
15. Shepherd LD, de Lange PJ, Perrie LR, (2009) Multiple colonizations of a remote oceanic archipelago by one species: how common is long-distance dispersal? Journal of Biogeography 36: 1972-1977.
16. Tsumura Y, Ohba K, (1993) Genetic structure of geographical marginal populations of Cryptomeria japonica. Canadian Journal of Forest Research 23: 859-863.
17. Amsellem L, Noyer JL, Le Bourgeois T, Hossaert-McKey M, (2000) Comparison of genetic diversity of the invasive weed Rubus alceifolius Poir. (Rosaceae) in its native range and in areas of introduction, using amplified fragment length polymorphism (AFLP) markers. Molecular Ecology 9: 443-455.
18. Baldwin BG, Crawford DJ, Francisco-Ortega J, Kim SC, Sang T, et al. (1998) Molecular phylogenetic insights on the origin and evolution of oceanic island plants. In: Soltis DE, Soltis PS, Doyle JJ, editors. Molecular Systematics of Plants II: DNA sequencing Boston Kluwer Academic Publishers pp. 410-441.
19. Guzmán B, Vargas P, (2005) Systematics, character evolution, and biogeography of Cistus L. (Cistaceae) based on ITS, trnL-trnF, and matK sequences. Molecular Phylogenetics and Evolution 37: 644-660.
20. Guzmán B, Vargas P, (2010) Unexpected synchronous differentiation in Mediterranean and Canarian Cistus (Cistaceae). Perspectives in Plant Ecology, Evolution and Systematics 12: 163-174.
21. Hansen A, Sunding P, (1993) Flora of Macaronesia. Checklist of vascular plants. 4th ed. rev Oslo Botanical Garden and Museum.
22. Carine MA, Russell SJ, Santos-Guerra A, Francisco-Ortega J, (2004) Relationships of the Macaronesian and Mediterranean floras: molecular evidence for multiple colonizations into Macaronesia and back-colonization of the continent in Convolvulus (Convolvulaceae). American Journal of Botany 91: 1070-1085.
23. Acebes JR, Del Arco M, García A, León MC, Pérez PL, et al. (2004) Pteridophyta, Spermatophyta. In: Martín JL, Zurita N, Arechavaleta M, editors. Lista de especies silvestres de Canarias (hongos, plantas y animales terrestres) La Laguna Consejería de Medio Ambiente y Ordenación Territorial, Gobierno de Canarias pp. 99-143.
24. Rodriguez-Sánchez F, Guzmán B, Valido A, Vargas P, Arroyo J, (2009) Late Neogene history of the laurel tree (Laurus L., Lauraceae) based on phylogeographical analyses of Mediterranean and Macaronesian populations. Journal of Biogeography 36: 1270-1281.
25. García-Verdugo C, Forrest AD, Balaguer L, Fay MF, Vargas P, (2010) Parallel evolution of insular Olea europaea subspecies based on geographical structuring of plastid DNA variation and phenotypic similarity in leaf traits. Botanical Journal of the Linnean Society 162: 54-63.
26. Francisco-Ortega J, Santos-Guerra A, Kim SC, Crawford DJ, (2000) Plant genetic diversity in the Canary Islands: a conservation perspective. American Journal of Botany 87: 909-919.
27. Bramwell D, Bramwell ZI, (2001) Flores silvestres de las Islas Canarias. 4th ed. Madrid Editorial Rueda.
28. Short MJ, (1994) Cistaceae. In: Press JR, Short MJ, editors. Flora of Madeira London The Natural History Museum pp. 226-227.
29. Marrero Á, Almeida R, Ríos C, (2008) Cistus grancanariae sp. nov. (Cistaceae) una nueva especie para Gran Canaria (Islas Canarias). Botánica Macaronésica 27: 73-88.
30. Fernández-Mazuecos M, Vargas P, (2010) Ecological rather than geographical isolation dominates Quaternary formation of Mediterranean Cistus species. Molecular Ecology 19: 1381-1395.
31. Guzmán B, Vargas P, (2009) Long-distance colonization of the Western Mediterranean by Cistus ladanifer (Cistaceae) despite the absence of special dispersal mechanisms. Journal of Biogeography 36: 954-968.
32. Guzmán B, Lledó MD, Vargas P, (2009) Adaptive radiation in Mediterranean Cistus (Cistaceae). PLoS ONE 4: e6362.
33. Drummond AJ, Ashton B, Buxton S, Cheung M, Cooper A, et al. (2010) Geneious v4.8, available fromhttp://www.geneious.com.
34. Larkin MA, Blackshields G, Brown NP, Chenna R, McGettigan PA, et al. (2007) Clustal W and Clustal X version 2.0. Bioinformatics 23: 2947-2948.
35. Templeton AR, Crandall KA, Sing CF, (1992) A cladistic analysis of phenotypic associations with haplotypes inferred from restriction endonuclease mapping and DNA sequence data. III. Cladogram estimation. Genetics 132: 619-633.
36. Clement M, Posada D, Crandall KA, (2000) TCS: a computer program to estimate gene genealogies. Molecular Ecology 9: 1657-1659.
37. Swofford D, (2002) PAUP*. Phylogenetic analysis using parsimony (*and other methods). Version 4. Sunderland Sinauer.
38. Mort ME, Soltis PS, Soltis DE, Mabry ML, (2000) Comparison of three methods for estimating internal support on phylogenetic trees. Systematic Biology 49: 160-171.
39. Posada D, (2008) jModelTest: phylogenetic model averaging. Molecular Biology and Evolution 25: 1253-1256.
40. Guindon S, Gascuel O, (2003) A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood. Systematic Biology 52: 696-704.
41. Nei M, (1987) Molecular evolutionary genetics. New York Columbia University Press.
42. Librado P, Rozas J, (2009) DnaSP v5: a software for comprehensive analysis of DNA polymorphism data. Bioinformatics 25: 1451-1452.
43. Hudson RR, (2000) A new statistic for detecting genetic differentiation. Genetics 155: 2011-2014.
44. Drummond AJ, Rambaut A, (2007) BEAST: Bayesian evolutionary analysis by sampling trees. BMC Evolutionary Biology 7: 214.
45. Drummond AJ, Ho SYW, Phillips MJ, Rambaut A, (2006) Relaxed phylogenetics and dating with confidence. PLoS Biology 4: e88.
46. Bloomquist EW, Lemey P, Suchard MA, (2010) Three roads diverged? Routes to phylogeographic inference. Trends in Ecology & Evolution 25: 626-632.
47. Lemey P, Rambaut A, Drummond AJ, Suchard MA, (2009) Bayesian phylogeography finds its roots. PLoS Computational Biology 5: e1000520.
48. Lemey P, Rambaut A, Welch JJ, Suchard MA, (2010) Phylogeography takes a relaxed random walk in continuous space and time. Molecular Biology and Evolution 27: 1877-1885.
49. Nielsen R, Beaumont MA, (2009) Statistical inferences in phylogeography. Molecular Ecology 18: 1034-1047.
50. Rambaut A, Drummond AJ, (2007) Tracer ver. 1.4, available fromhttp://beast.bio.ed.ac.uk/Tracer.
51. Richardson JE, Fay MF, Cronk QCB, Chase MW, (2003) Species delimitation and the origin of populations in island representatives of Phylica (Rhamnaceae). Evolution 57: 816-827.
52. Piñeiro R, Fuertes-Aguilar J, Draper-Munt D, Nieto-Feliner G, (2007) Ecology matters: Atlantic-Mediterranean disjunction in the sand-dune shrub Armeria pungens (Plumbaginaceae). Molecular Ecology 16: 2155-2171.
53. Vendramin GG, Fady B, Gonzalez-Martinez SC, Hu FS, Scotti I, et al. (2008) Genetically depauperate but widespread: the case of an emblematic mediterranean pine. Evolution 62: 680-688.
54. Cronk QCB, (1992) Relict floras of Atlantic islands- patterns assessed. Biological Journal of the Linnean Society 46: 91-103.
55. Médail F, Quézel P, (1999) The phytogeographical significance of SW Morocco compared to the Canary Islands. Plant Ecology 140: 221-244.
56. Bramwell D, (1976) The endemic flora of the Islas Canarias: distribution, relationships and phytogeography. In: Kunkel G, editors. Biogeography and Ecology in the Canary Islands The Hague W. Junk Publishers pp. 207-240.
57. Sunding P, (1979) Origins of the Macaronesian flora. In: Bramwell D, editors. Plants and Islands New York Academic Press pp. 13-40.
58. Nepokroeff M, Sytsma KJ, Wagner WL, Zimmer EA, (2003) Reconstructing ancestral patterns of colonization and dispersal in the Hawaiian understory tree genus Psychotria (Rubiaceae): a comparison of parsimony and likelihood approaches. Systematic Biology 52: 820-838.
59. Hess J, Kadereit JW, Vargas P, (2000) The colonization history of Olea europaea L. in Macaronesia based on internal transcribed spacer 1 (ITS-1) sequences, randomly amplified polymorphic DNAs (RAPD), and intersimple sequence repeats (ISSR). Molecular Ecology 9: 857-868.
60. Carracedo JC, Pérez FJ, Ancochea E, Meco J, Hernán F, et al. (2002) Cenozoic volcanism II: The Canary Islands. In: Gibbons W, Moreno T, editors. The geology of Spain London The Geological Society of London pp. 439-472.
61. Chiang TY, Schaal BA, (2006) Phylogeography of plants in Taiwan and the Ryukyu archipelago. Taxon 55: 31-41.
62. Gómez A, González-Martínez SC, Collada C, Climent J, Gil L, (2003) Complex population genetic structure in the endemic Canary Island pine revealed using chloroplast microsatellite markers. Theoretical and Applied Genetics 107: 1123-1131.
63. Ancochea E, Fuster JM, Ibarrola E, Cendrero A, Coello J, et al. (1990) Volcanic evolution of the island of Tenerife (Canary Islands) in the light of new K-Ar data. Journal of Volcanology and Geothermal Research 44: 231-249.
64. DeWalt SJ, Hamrick JL, (2004) Genetic variation of introduced Hawaiian and native Costa Rican populations of an invasive tropical shrub, Clidemia hirta (Melastomataceae). American Journal of Botany 91: 1155-1162.
65. Takayama K, Ohi-Toma T, Kudoh H, Kato H, (2005) Origin and diversification of Hibiscus glaber, species endemic to the oceanic Bonin Islands, revealed by chloroplast DNA polymorphism. Molecular Ecology 14: 1059-1071.
66. Hedderson TA, Nowell TL, (2006) Phylogeography of Homalothecium sericeum (Hedw.) Br. Eur.; toward a reconstruction of glacial survival and postglacial migration. Journal of Bryology 28: 283-292.
67. Matsumura S, Yokoyama J, Fukuda T, Maki M, (2009) Intraspecific differentiation of Limonium wrightii (Plumbaginaceae) on northwestern Pacific Islands: rate heterogeneity in nuclear rDNA and its distance-independent geographic structure. Molecular Phylogenetics and Evolution 53: 1032-1036.
68. Rivera-Ocasio E, Aide TM, McMillan WO, (2006) The influence of spatial scale on the genetic structure of a widespread tropical wetland tree, Pterocarpus officinalis (Fabaceae). Conservation Genetics 7: 251-266.