Effects of continuous cropping on bacterial community diversity in rhizosphere soil of Rehmannia glutinosa

Chinese Journal of Applied Ecology

Volumn 21, Issue 11, 2010, Pages 2843-2848

  Zhang, Zhong Yi ^a,b   Chen, Hui ^b   Yang, Yan Hui ^a   Chen, Ting ^b   Lin, Rui Yu ^b   Chen, Xin Jian ^a   Lin, Wen Xiong ^b  

^a HENAN AGRICULTURAL UNIVERSITY   (China)

^b FUJIAN AGRICULTURE AND FORESTRY UNIVERSITY   (China)

Author keywords

Bacterial community; Continuous cropping; Rehmannia glutinosa; Rhizosphere soil; T RFLP

Indexed keywords

BACTERIUM; COMMUNITY STRUCTURE; DIVERSITY INDEX; DOMINANCE; HERB; MICROBIAL COMMUNITY; RHIZOSPHERE; SOIL MICROORGANISM; SPECIES DIVERSITY;

AGRICULTURE; ARTICLE; BACTERIUM; BIODIVERSITY; CLASSIFICATION; GROWTH, DEVELOPMENT AND AGING; METHODOLOGY; MICROBIOLOGY; PLANT ROOT; REHMANNIA; RHIZOSPHERE;

AGRICULTURE; BACTERIA; BIODIVERSITY; PLANT ROOTS; REHMANNIA; RHIZOSPHERE; SOIL MICROBIOLOGY;

BACILLI (CLASS); BACTERIA (MICROORGANISMS); EPSILONPROTEOBACTERIA; PROTEOBACTERIA; REHMANNIA; REHMANNIA GLUTINOSA;

EID: 79951833167     PISSN: 10019332     EISSN: None     Source Type: Journal    
DOI: None     Document Type: Article

References (28)

1. Zhang Z-Y, Lin W-X- Continuous cropping obstacle and allelopathic autotoxicity of medicinal plants. Chinese Journal of Eco-Agriculture 2009, 17(1): 189-196 ( in Chinese)
2. Zhang X-L, Pan Z-G, Zhou X-F , et al. Autotoxicity and continuous cropping obstacles. Chinese Journal of Soil Science, 2007, 38(4) : 781-784 (in Chinese)
3. Zhou J, Guo L-P, Huang L-Q et al. Application in growing traditional medicinal Herbs. World Science and Technology-Modernization of Traditional Chinese Medicine 2007, 9(5); 34-38 (in Chinese)
4. Zhang S-X, Gao Z-Q. Continuous cropping obstacle and rhizospheric microecology. II. Root exudates and phenolic acids. Chinese Journal of Applied Ecology, 2000, 11(1): 152-154 (in Chinese)
5. Han L-M, Yan F , Wang S-Q , et al. Primary identification of organic compounds in soybean rhizospheric soil on continuous and alternate cropping and their allelopathy on soybean seed germination. Chinese Journal of Applied Ecology , 2000, 11(4): 582-586 (in Chinese)
6. Gao Z-Q, Zhang S-X . Continuous cropping obstacle and rhizospheric microecology. I . Root exudates and their ecological effects. Chinese Journal of Applied Ecology , 1998, 9(5) : 549-554 (in Chinese)
7. Wu F-Z, Zhao F-Y , Liu Y-Y . On the reasons of continuous cropping obstacles in vegetable facility gardening. Journal of Northeast Agricultural University , 2000, 31(3) : 241-247 (in Chinese)
8. Ma Y-H, Wei M, Wang X-F . Variation of microflora and enzyme activity in continuous cropping cucumber soil in solar greenhouse. Chinese Journal of Applied Ecology, 2004, 15(6); 1005-1008 (in Chinese)
9. Yang CH, Crowley DE, Menge JA. 16S rDNA fingerprinting of rhizosphere bacterial communities associated with healthy and phytophora infected avocado toots. FEMS Microbiol Ecology, 2000, 35: 129-136 (Pubitemid 32289249)
10. Mithufer A. Suppression of plant defence in rhizobialegume symbiosis. Trends in Plant Science, 2002, 7; 440-444
11. Blum U, Shafer SR, Lehmen ME. Evidence for inhibitory allelopathic interactions involving phenolic acids in field soils : Concepts vs. an experimental model. Critical Reviews in Plant Sciences, 1999, 15: 673-693 (Pubitemid 29478388)
12. Yu JQ, Mstsui Y. Effect of root exudates of cucumber (Cucumis sativus) and allelochemicals on ion uptake by cucumber seedlings. Journal of Chemical Ecology, 1997, 23(3): 817-827 (Pubitemid 27210880)
13. Chen D-M, Ke W-H , Chen L-L , et al. Diversity of bacterial community in rhizosphere soils under effects of continuously planting burley tobacco. Chinese Journal of Applied Ecology , 2010, 21(7): 1751-1758 (in Chinese)
14. Ruan W-B, Liu M-H, Huang B , et al. Allelophathic effect of p- and m-hydroxy phenylacetic acid on soybean ( Glycine max L. ) germination. Chinese Journal of Applied Ecology , 2003, 14(5) : 782-788 (in Chinese)
15. MaY-H, Wang X-F, Wei M , et al. Accumulation of phenolic acids in continuously cropped cucumber soil and their effects on soil microbes and their effects on soil microbes and enzyme activities. Chinese Journal of Applied Ecology 2005, 16(11): 2149-2153 (in Chinese)
16. Pang X, Zhang F-S, Wang J-G Effect of different nitrogen levels on SMB-N and microbial activity. Plant Nutrition and Fertilizer Science , 2000, 6(4). 476-480 (in Chinese)
17. Zhang R-F, Çao H, Cui Z-L , et al. Extraction and purification of soil microbial total DNA. Acta Microbiologica Sinica , 2003, 43(2) : 276-282 (in Chinese)
18. Zhou JZ, Bruns MA, Tiedje JM. DNA recovery from soils of diverse composition. Applied and Environmental Microbiology, 1996, 62: 316-322 (Pubitemid 26047397)
19. Dunbar J, Ticknor LO, Kuske CR. Phylogenetic specificity and reproducibility and new method for analysis of terminal restriction fragment profiles of 16S rRNA genes from bacterial communities. Applied and Environmental Microbiology, 2001, 67: 190-197 (Pubitemid 32044418)
20. Horswell J, Cordiner SJ, Maas EW, et al. Forensic comparison of soils by bacterial community DNA profiling. Journal of Forensic Sciences, 2002, 47; 350-353 (Pubitemid 34206098)
21. Ge Y-Y, Chen S, Sun H et al. The application exploring of bacterial community diversity profiling in forensic comparison of soil. Chinese Journal of Forensic Medicine , 2008, 23(2) ; 104-106 (in Chinese)
22. Maidak BL, Cole JR, Parker CT Jr, et al. The RDP (ribosomal database project) continues. Nucleic Acids Research, 2000, 28:173-174 (Pubitemid 30047749)
23. Marsh TL, Saxrmn P, Cole J, et al. Terminal restriction fragment length polymorphism analysis program, a web-based research tool for microbial community analysis. Applied and Environmental Microbiology, 2000, 66 ; 3616-3620 (Pubitemid 30624605)
24. Liu WT, Marsh TL, Cheng H, et al. Characterization of microbial diversity by determining terminal restriction fragment length polymorphisms of genes encoding 16S rRNA. Applied and Environmental Microbiology, 1997, 63: 4516-4522 (Pubitemid 27485783)
25. Clement BG, Kehl LE, DeBord KL, et al. Terminal restriction fragment patterns ( TRFPs ) , a rapid, PCRbased method for the comparison of complex bacterial communities. Journal of Microbiology Methods, 1998, 31: 135-142 (Pubitemid 28084288)
26. Kaplan CW, Astaire JC, Sanders ME, et al. 16S ribosomal DNA terminal restriction fragment pattern analysis of bacterial communities in feces of rats fed Lactobacillus acidophilus NCFM. Applied and Environmental Microbiology, 2001, 67: 1935-1939 (Pubitemid 33644968)
27. Barkovskii AL, Fukui H. A simple method for differential isolation of freely dispersed and particle-associated peat microorganisms. Journal of Microbiological Methods, 2004, 56: 93-105 (Pubitemid 38045449)
28. Li C-G, U X-M, Wang J-G. 2006. Effect of soybean continuous cropping on bulk and rhizosphere soil microbial community function. Acta Ecologica Sinica, 2006, 26(4): 1145-1150 (in Chinese)