메뉴 건너뛰기




Volumn 5, Issue 3, 2011, Pages 379-388

Patterns of fungal diversity and composition along a salinity gradient

Author keywords

community composition; estuary; fungi; ribosomal RNA; salinity

Indexed keywords

RNA 18S;

EID: 79951809934     PISSN: 17517362     EISSN: 17517370     Source Type: Journal    
DOI: 10.1038/ismej.2010.137     Document Type: Article
Times cited : (159)

References (58)
  • 1
    • 34248584679 scopus 로고    scopus 로고
    • Nitrogen fertilization reduces diversity and alters community structure of active fungi in boreal ecosystems
    • DOI 10.1016/j.soilbio.2007.02.001, PII S0038071707000685
    • Allison SD, Hanson CA, Treseder KK. (2007). Nitrogen fertilization reduces diversity and alters community structure of active fungi in boreal ecosystems. Soil Biol Biochem 39: 1878-1887. (Pubitemid 46754348)
    • (2007) Soil Biology and Biochemistry , vol.39 , Issue.8 , pp. 1878-1887
    • Allison, S.D.1    Hanson, C.A.2    Treseder, K.K.3
  • 2
    • 35148853590 scopus 로고    scopus 로고
    • Changes in fungal community composition in response to vegetational succession during the natural regeneration of cutover peatlands
    • DOI 10.1007/s00248-007-9220-7
    • Artz RRE, Anderson IC, Chapman SJ, Hagn A, Schloter M, Potts JM et al. (2007). Changes in fungal community composition in response to vegetational succession during the natural regeneration of cutover peatlands. Microb Ecol 54: 508-522. (Pubitemid 47546803)
    • (2007) Microbial Ecology , vol.54 , Issue.3 , pp. 508-522
    • Artz, R.R.E.1    Anderson, I.C.2    Chapman, S.J.3    Hagn, A.4    Schloter, M.5    Potts, J.M.6    Campbell, C.D.7
  • 3
    • 23944433934 scopus 로고    scopus 로고
    • Loss of diversity of ammonia-oxidizing bacteria correlates with increasing salinity in an estuary system
    • DOI 10.1111/j.1462-2920.2005.00808.x
    • Bernhard AE, Donn T, Giblin AE, Stahl DA. (2005). Loss of diversity of ammonia-oxidizing bacteria correlates with increasing salinity in an estuary system. Environ Microbiol 7: 1289-1297. (Pubitemid 41204923)
    • (2005) Environmental Microbiology , vol.7 , Issue.9 , pp. 1289-1297
    • Bernhard, A.E.1    Donn, T.2    Giblin, A.E.3    Stahl, D.A.4
  • 4
    • 34248562001 scopus 로고    scopus 로고
    • Functionally distinct communities of ammonia-oxidizing bacteria along an estuarine salinity gradient
    • DOI 10.1111/j.1462-2920.2007.01260.x
    • Bernhard AE, Tucker J, Giblin AE, Stahl DA. (2007). Functionally distinct communities of ammonia-oxidizing bacteria along an estuarine salinity gradient. Environ Microbiol 9: 1439-1447. (Pubitemid 46763523)
    • (2007) Environmental Microbiology , vol.9 , Issue.6 , pp. 1439-1447
    • Bernhard, A.E.1    Tucker, J.2    Giblin, A.E.3    Stahl, D.A.4
  • 5
    • 0028178320 scopus 로고
    • Positive interactions in communities
    • Bertness MD, Callaway R. (1994). Positive interactions in communities. Trends Ecolo Evol 9: 191-193.
    • (1994) Trends Ecolo Evol , vol.9 , pp. 191-193
    • Bertness, M.D.1    Callaway, R.2
  • 6
    • 13844278172 scopus 로고    scopus 로고
    • Distribution of microbial communities associated with the dominant high marsh plants and sediments of the United States East Coast
    • DOI 10.1007/s00248-003-1051-6
    • Blum LK, Roberts MS, Garland JL, Mills AL. (2004). Distribution of microbial communities associated with the dominant high marsh plants and sediments of the United States east coast. Microb Ecol 48: 375-388. (Pubitemid 40240663)
    • (2004) Microbial Ecology , vol.48 , Issue.3 , pp. 375-388
    • Blum, L.K.1    Roberts, M.S.2    Garland, J.L.3    Mills, A.L.4
  • 7
    • 0033771173 scopus 로고    scopus 로고
    • PCR primers that amplify fungal rRNA genes from environmental samples
    • Borneman J, Hartin RJ. (2000). PCR primers that amplify fungal rRNA genes from environmental samples. Appl Environ Microbiol 66: 4356-4360.
    • (2000) Appl Environ Microbiol , vol.66 , pp. 4356-4360
    • Borneman, J.1    Hartin, R.J.2
  • 8
    • 0036222111 scopus 로고    scopus 로고
    • Compositional changes in free-living bacterial communities along a salinity gradient in two temperate estuaries
    • Bouvier TC, del Giorgio PA. (2002). Compositional changes in free-living bacterial communities along a salinity gradient in two temperate estuaries. Limnol Oceanogr 47: 453-470. (Pubitemid 34290312)
    • (2002) Limnology and Oceanography , vol.47 , Issue.2 , pp. 453-470
    • Bouvier, T.C.1    Del Giorgio, P.A.2
  • 9
    • 0037770278 scopus 로고    scopus 로고
    • Soil fungal community structure in a temperate upland grassland soil
    • DOI 10.1016/S0168-6496(03)00126-0
    • Brodie E, Edwards S, Clipson N. (2003). Soil fungal community structure in a temperate upland grassland soil. FEMS Microbiol Ecol 45: 105-114. (Pubitemid 36859780)
    • (2003) FEMS Microbiology Ecology , vol.45 , Issue.2 , pp. 105-114
    • Brodie, E.1    Edwards, S.2    Clipson, N.3
  • 11
    • 0038679463 scopus 로고    scopus 로고
    • Interactions between the salt marsh grass Spartina patens, arbuscular mycorrhizal fungi and sediment bacteria during the growing season
    • DOI 10.1016/S0038-0717(03)00004-X
    • Burke DJ, Hamerlynck EP, Hahn D. (2003). Interactions between the salt marsh grass Spartina patens, arbuscular mycorrhizal fungi and sediment bacteria during the growing season. Soil Biol Biochem 35: 501-511. (Pubitemid 36726122)
    • (2003) Soil Biology and Biochemistry , vol.35 , Issue.4 , pp. 501-511
    • Burke, D.J.1    Hamerlynck, E.P.2    Hahn, D.3
  • 16
    • 58149341272 scopus 로고    scopus 로고
    • Secondary succession dynamics in estuarine marshes across landscape-scale salinity gradients
    • Crain CM, Albertson LK, Bertness MD. (2008). Secondary succession dynamics in estuarine marshes across landscape-scale salinity gradients. Ecology 89: 2889-2899.
    • (2008) Ecology , vol.89 , pp. 2889-2899
    • Crain, C.M.1    Albertson, L.K.2    Bertness, M.D.3
  • 17
    • 5344267486 scopus 로고    scopus 로고
    • Physical and biotic drivers of plant distribution across estuarine salinity gradients
    • Crain CM, Silliman BR, Bertness SL, Bertness MD. (2004). Physical and biotic drivers of plant distribution across estuarine salinity gradients. Ecology 85: 2539-2549. (Pubitemid 39348546)
    • (2004) Ecology , vol.85 , Issue.9 , pp. 2539-2549
    • Crain, C.M.1    Silliman, B.R.2    Bertness, S.L.3    Bertness, M.D.4
  • 18
    • 1642376424 scopus 로고    scopus 로고
    • Microbial Biogeography along an Estuarine Salinity Gradient: Combined Influences of Bacterial Growth and Residence Time
    • DOI 10.1128/AEM.70.3.1494-1505.2004
    • Crump BC, Hopkinson CS, Sogin ML, Hobbie JE. (2004). Microbial biogeography along an estuarine salinity gradient: combined influences of bacterial growth and residence time. Appl Environ Microbiol 70: 1494-1505. (Pubitemid 38365131)
    • (2004) Applied and Environmental Microbiology , vol.70 , Issue.3 , pp. 1494-1505
    • Crump, B.C.1    Hopkinson, C.S.2    Sogin, M.L.3    Hobbie, J.E.4
  • 20
    • 84951664695 scopus 로고
    • Plant growth and productivity along complex gradients in a Pacific Northwest brackish intertidal marsh
    • Ewing K. (1986). Plant growth and productivity along complex gradients in a Pacific northwest brackish intertidal marsh. Estuaries 9: 49-62. (Pubitemid 17249789)
    • (1986) Estuaries , vol.9 , Issue.1 , pp. 49-62
    • Ewing, K.1
  • 22
    • 0001900862 scopus 로고
    • Latitudinal variations in organic diversity
    • Fisher AG. (1961). Latitudinal variations in organic diversity. Evolution 14: 64-81.
    • (1961) Evolution , vol.14 , pp. 64-81
    • Fisher, A.G.1
  • 23
    • 0035712954 scopus 로고    scopus 로고
    • The magnitude of fungal diversity: The 1.5 million species estimate revisited
    • Hawksworth DL. (2001). The magnitude of fungal diversity: the 1.5 million species estimate revisited. Mycol Res 105: 1422-1432. (Pubitemid 34134581)
    • (2001) Mycological Research , vol.105 , Issue.12 , pp. 1422-1432
    • Hawksworth, D.L.1
  • 24
    • 20144388685 scopus 로고    scopus 로고
    • Fungal diversity and its implications for genetic resource collections
    • Hawksworth DL. (2004). Fungal diversity and its implications for genetic resource collections. Stud Mycol 50: 9-17.
    • (2004) Stud Mycol , vol.50 , pp. 9-17
    • Hawksworth, D.L.1
  • 26
    • 0037742699 scopus 로고    scopus 로고
    • Bacterial diversity patterns along a gradient of primary productivity
    • DOI 10.1046/j.1461-0248.2003.00472.x
    • Horner-Devine MC, Leibold MA, Smith VH, Bohannan BJM. (2003). Bacterial diversity patterns along a gradient of primary productivity. Ecol Lett 6: 613-622. (Pubitemid 36796869)
    • (2003) Ecology Letters , vol.6 , Issue.7 , pp. 613-622
    • Horner-Devine, M.C.1    Leibold, M.A.2    Smith, V.H.3    Bohannan, B.J.M.4
  • 27
    • 0035487318 scopus 로고    scopus 로고
    • Counting the uncountable: Statistical approaches to estimating microbial diversity
    • DOI 10.1128/AEM.67.10.4399-4406.2001
    • Hughes JB, Hellmann JJ, Ricketts TH, Bohannan BJM.(2001). Counting the uncountable: statistical approaches to estimating microbial diversity. Appl Environ Microbiol 67: 4399-4406. (Pubitemid 33646064)
    • (2001) Applied and Environmental Microbiology , vol.67 , Issue.10 , pp. 4399-4406
    • Hughes, J.B.1    Hellmann, J.J.2    Ricketts, T.H.3    Bohannan, B.J.M.4
  • 28
    • 37849188952 scopus 로고    scopus 로고
    • Abundance of fungi and bacteria in a nutrient-impacted Florida wetland
    • DOI 10.1016/j.apsoil.2006.09.002, PII S0929139306002034
    • Ipsilantis I, Sylvia DM. (2007). Abundance of fungi and bacteria in a nutrient-impacted Florida wetland. Appl Soil Ecol 35: 272-280. (Pubitemid 44828480)
    • (2007) Applied Soil Ecology , vol.35 , Issue.2 , pp. 272-280
    • Ipsilantis, I.1    Sylvia, D.M.2
  • 31
    • 0034954171 scopus 로고    scopus 로고
    • Pesticide effects on bacterial diversity in agricultural soils - A review
    • DOI 10.1007/s003740100351
    • Johnsen K, Jacobsen CS, Torsvik V, Sorensen J. (2001). Pesticide effects on bacterial diversity in agricultural soils-a review. Biol Fert Soils 33: 443-453. (Pubitemid 32643772)
    • (2001) Biology and Fertility of Soils , vol.33 , Issue.6 , pp. 443-453
    • Johnsen, K.1    Jacobsen, C.S.2    Torsvik, V.3    Sorensen, J.4
  • 32
    • 0036729772 scopus 로고    scopus 로고
    • 2 on the fungal community in a coastal scrub oak forest soil investigated with terminal-restriction fragment length polymorphism analysis
    • DOI 10.1128/AEM.68.9.4370-4376.2002
    • Klamer M, Roberts MS, Levine LH, Drake BG, Garland JL. (2002). Influence of elevated CO2 on the fungal community in a coastal scrub oak forest soil investigated with terminal-restriction fragment length polymorphism analysis. Appl Environ Microbiol 68: 4370-4376. (Pubitemid 34988119)
    • (2002) Applied and Environmental Microbiology , vol.68 , Issue.9 , pp. 4370-4376
    • Klamer, M.1    Roberts, M.S.2    Levine, L.H.3    Drake, B.G.4    Garland, J.L.5
  • 34
    • 33845873289 scopus 로고    scopus 로고
    • Interactive Tree Of Life (iTOL): An online tool for phylogenetic tree display and annotation
    • DOI 10.1093/bioinformatics/btl529
    • Letunic I, Bork P. (2007). Interactive Tree of Life (iTOL): an online tool for phylogenetic tree display and annotation. Bioinformatics 23: 127-128. (Pubitemid 46017867)
    • (2007) Bioinformatics , vol.23 , Issue.1 , pp. 127-128
    • Letunic, I.1    Bork, P.2
  • 35
    • 33748713890 scopus 로고    scopus 로고
    • UniFrac-an online tool for comparing microbial community diversity in a phylogenetic context
    • Lozupone C, Hamady M, Knight R. (2006). UniFrac-an online tool for comparing microbial community diversity in a phylogenetic context. BMC Bioinformatics 7: 371.
    • (2006) BMC Bioinformatics , vol.7 , pp. 371
    • Lozupone, C.1    Hamady, M.2    Knight, R.3
  • 36
    • 29144464937 scopus 로고    scopus 로고
    • UniFrac: A new phylogenetic method for comparing microbial communities
    • DOI 10.1128/AEM.71.12.8228-8235.2005
    • Lozupone C, Knight R. (2005). UniFrac: a new phylogenetic method for comparing microbial communities. Appl Environ Microbiol 71: 8228-8235. (Pubitemid 41803949)
    • (2005) Applied and Environmental Microbiology , vol.71 , Issue.12 , pp. 8228-8235
    • Lozupone, C.1    Knight, R.2
  • 41
    • 2542507755 scopus 로고    scopus 로고
    • The effect of long-term mercury pollution on the soil microbial community
    • DOI 10.1016/S0168-6496(01)00112-X, PII S016864960100112X
    • Muller AK, Westergaard K, Christensen S, Sorensen SJ. (2001). The effect of long-term mercury pollution on the soil microbial community. FEMS Microbiol Ecol 36: 11-19. (Pubitemid 32476855)
    • (2001) FEMS Microbiology Ecology , vol.36 , Issue.1 , pp. 11-19
    • Muller, A.K.1    Westergaard, K.2    Christensen, S.3    Sorensen, S.J.4
  • 43
    • 0024186069 scopus 로고
    • Comparative ecology of tidal freshwater and salt marshes
    • Odum WE. (1988). Comparative ecology of tidal freshwater and salt marshes. Annu Rev Ecol Syst 19: 147-176.
    • (1988) Annu Rev Ecol Syst , vol.19 , pp. 147-176
    • Odum, W.E.1
  • 44
    • 0000087293 scopus 로고
    • A newly discovered role for aerobic fungi in anaerobic salt marsh soils
    • Padgett D, Celio D. (1990). A newly discovered role for aerobic fungi in anaerobic salt marsh soils. Mycologia 82: 791-794.
    • (1990) Mycologia , vol.82 , pp. 791-794
    • Padgett, D.1    Celio, D.2
  • 46
    • 42149108694 scopus 로고    scopus 로고
    • Diversity and spatio-temporal distribution of ammonia-oxidizing Archaea and Bacteria in sediments of the Westerschelde estuary
    • DOI 10.1111/j.1574-6941.2008.00462.x
    • Sahan E, Muyzer G. (2008). Diversity and spatio-temporal distribution of ammonia-oxidizing Archaea and Bacteria in sediments of the Westerschelde estuary. FEMS Microbiol Ecol 64: 175-186. (Pubitemid 351533424)
    • (2008) FEMS Microbiology Ecology , vol.64 , Issue.2 , pp. 175-186
    • Sahan, E.1    Muyzer, G.2
  • 47
    • 15444362001 scopus 로고    scopus 로고
    • Introducing DOTUR, a computer program for defining operational taxonomic units and estimating species richness
    • DOI 10.1128/AEM.71.3.1501-1506.2005
    • Schloss PD, Handelsman J. (2005). Introducing DOTUR, a computer program for defining operational taxonomic units and estimating species richness. Appl Environ Microbiol 71: 1501-1506. (Pubitemid 40396689)
    • (2005) Applied and Environmental Microbiology , vol.71 , Issue.3 , pp. 1501-1506
    • Schloss, P.D.1    Handelsman, J.2
  • 48
    • 4544324291 scopus 로고    scopus 로고
    • Decomposition rate of organic substrates in relation to the species diversity of soil saprophytic fungi
    • DOI 10.1007/s00442-003-1478-y
    • Setala H, McLean MA. (2004). Decomposition rate of organic substrates in relation to the species diversity of soil saprophytic fungi. Oecologia 139: 98-107. (Pubitemid 39239278)
    • (2004) Oecologia , vol.139 , Issue.1 , pp. 98-107
    • Setala, H.1    McLean, M.A.2
  • 51
    • 50249100595 scopus 로고    scopus 로고
    • A rapid bootstrap algorithm for the RAxML Web servers
    • Stamatakis A, Hoover P, Rougemont J. (2008). A rapid bootstrap algorithm for the RAxML Web servers. Syst Biol 75: 758-771.
    • (2008) Syst Biol , vol.75 , pp. 758-771
    • Stamatakis, A.1    Hoover, P.2    Rougemont, J.3
  • 52
    • 20444408034 scopus 로고    scopus 로고
    • Facilitative interactions rather than resource partitioning drive diversity-functioning relationships in laboratory fungal communities
    • DOI 10.1111/j.1461-0248.2005.00757.x
    • Tiunov AV, Scheu S. (2005). Facilitative interactions rather than resource partitioning drive diversityfunctioning relationships in laboratory fungal communities. Ecol Lett 8: 618-625. (Pubitemid 40802029)
    • (2005) Ecology Letters , vol.8 , Issue.6 , pp. 618-625
    • Tiunov, A.V.1    Scheu, S.2
  • 53
    • 38649142473 scopus 로고    scopus 로고
    • The unseen majority: Soil microbes as drivers of plant diversity and productivity in terrestrial ecosystems
    • DOI 10.1111/j.1461-0248.2007.01139.x
    • van der Heijden MGA, Bardgett RD, van Straalen NM. (2008). The unseen majority: soil microbes as drivers of plant diversity and productivity in terrestrial ecosystems. Ecol Lett 11: 296-310. (Pubitemid 351172045)
    • (2008) Ecology Letters , vol.11 , Issue.3 , pp. 296-310
    • Van Der Heijden, M.G.A.1    Bardgett, R.D.2    Van Straalen, N.M.3
  • 55
    • 33748742598 scopus 로고    scopus 로고
    • Resource availability controls fungal diversity across a plant diversity gradient
    • DOI 10.1111/j.1461-0248.2006.00965.x
    • Waldrop MP, Zak DR, Blackwood CB, Curtis CD, Tilman D. (2006). Resource availability controls fungal diversity across a plant diversity gradient. Ecol Lett 9: 1127-1135. (Pubitemid 44401585)
    • (2006) Ecology Letters , vol.9 , Issue.10 , pp. 1127-1135
    • Waldrop, M.P.1    Zak, D.R.2    Blackwood, C.B.3    Curtis, C.D.4    Tilman, D.5
  • 56
    • 25144481977 scopus 로고    scopus 로고
    • Archaeal diversity along a soil salinity gradient prone to disturbance
    • DOI 10.1111/j.1462-2920.2005.00864.x
    • Walsh DA, Papke RT, Doolittle WF. (2005). Archaeal diversity along a soil salinity gradient prone to disturbance. Environ Microbiol 7: 1655-1666. (Pubitemid 41345907)
    • (2005) Environmental Microbiology , vol.7 , Issue.10 , pp. 1655-1666
    • Walsh, D.A.1    Papke, R.T.2    Doolittle, W.F.3
  • 57
    • 34249937260 scopus 로고    scopus 로고
    • Patterns of bacterial diversity across a range of Antarctic terrestrial habitats
    • DOI 10.1111/j.1462-2920.2007.01379.x
    • Yergeau E, Newsham KK, Pearce DA, Kowalchuk GA. (2007). Patterns of bacterial diversity across a range of Antarctic terrestrial habitats. Environ Microbiol 9: 2670-2682. (Pubitemid 47547536)
    • (2007) Environmental Microbiology , vol.9 , Issue.11 , pp. 2670-2682
    • Yergeau, E.1    Newsham, K.K.2    Pearce, D.A.3    Kowalchuk, G.A.4
  • 58
    • 0345016271 scopus 로고    scopus 로고
    • Plant diversity, soil microbial communities, and ecosystem function: Are there any links?
    • Zak DR, Holmes WE, White DC, Peacock AD, Tilman D. (2003). Plant diversity, soil microbial communities, and ecosystem function: are there any links? Ecology 84: 2042-2050. (Pubitemid 37435679)
    • (2003) Ecology , vol.84 , Issue.8 , pp. 2042-2050
    • Zak, D.R.1    Holmes, W.E.2    White, D.C.3    Peacock, A.D.4    Tilman, D.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.