Erratum: Transformation and carbon isotope fractionation of tetra- and trichloroethene to trans -dichloroethene by dehalococcoides sp. strain CBDB1 (Environmental Science & Technology (2011) 45 (1555-1562) DOI: 10.1021/es1023459);Transformation and carbon isotope fractionation of tetra-and trichloroethene to trans-dichloroethene by dehalococcoides sp. strain CBDB1

Environmental Science and Technology

Volumn 45, Issue 4, 2011, Pages 1555-1562

  Marco Urrea, Ernest ^a   Nijenhuis, Ivonne ^a   Adrian, Lorenz ^a  

^a HELMHOLTZ CENTRE FOR ENVIRONMENTAL RESEARCH UFZ   (Germany)

Author keywords

[No Author keywords available]

Indexed keywords

CARBON; DECHLORINATION; ETHYLENE; GENES; ISOTOPES; SEDIMENTS; TRICHLOROETHYLENE;

CARBON ISOTOPE FRACTIONATION; DICHLOROETHENES; ELECTRON ACCEPTOR; ENRICHMENT FACTORS; ISOLATED STRAINS; ISOTOPE SIGNATURES; REDUCTIVE DEHALOGENATION; TCE DECHLORINATION;

STRAIN;

1,2 DICHLOROETHYLENE; CARBON; CHLORIDE; TETRACHLOROETHYLENE; TRICHLOROETHYLENE; 1,2-DICHLOROETHYLENE; SOIL POLLUTANT; TETRACYCLINE; VINYLIDENE CHLORIDE;

BACTERIUM; CARBON ISOTOPE; CHEMICAL POLLUTANT; ELECTRON; ISOTOPIC FRACTIONATION; ISOTOPIC RATIO; MICROSCOPY; SEDIMENT POLLUTION; SOIL POLLUTION; TETRACHLOROETHYLENE; TRICHLOROETHYLENE;

ARTICLE; BACTERIAL GROWTH; BACTERIAL STRAIN; BACTERIUM CULTURE; CELL COUNT; CELL GROWTH; CONTROLLED STUDY; DECHLORINATION; DEHALOCOCCOIDES STRAIN CBDB1; DEHALOGENATION; FRACTIONATION; GENE; MICROSCOPY; NONHUMAN; RESPIRATORY SYSTEM; SEDIMENT; SOIL; CHLOROFLEXI; GENETICS; METABOLISM; SOIL POLLUTANT;

DEHALOCOCCOIDES; TETRA;

CARBON ISOTOPES; CHLOROFLEXI; DICHLOROETHYLENES; SOIL POLLUTANTS; TETRACHLOROETHYLENE; TETRACYCLINE; TRICHLOROETHYLENE;

EID: 79951649442     PISSN: 0013936X     EISSN: 15205851     Source Type: Journal    
DOI: 10.1021/es202031v     Document Type: Erratum

References (44)

1. Maymó-Gatell, X.; Chien, Y.; Gossett, J. M.; Zinder, S. H. Isolation of a bacterium that reductively dechlorinates tetrachloroethene to ethene Science 1997, 276 (5318) 1568-71 (Pubitemid 27255322)
2. He, J.; Ritalahti, K. M.; Yang, K. L.; Koenigsberg, S. S.; Löffler, F. E. Detoxification of vinyl chloride to ethene coupled to growth of an anaerobic bacterium Nature 2003, 424 (6944) 62-5 (Pubitemid 36834840)
3. He, J.; Sung, Y.; Krajmalnik-Brown, R.; Ritalahti, K. M.; Löffler, F. E. Isolation and characterization of Dehalococcoides sp. strain FL2, a trichloroethene (TCE)-and 1,2-dichloroethene-respiring anaerobe Environ. Microbiol. 2005, 7 (9) 1442-50 (Pubitemid 41204937)
4. Sung, Y.; Ritalahti, K. M.; Apkarian, R. P.; Löffler, F. E. Quantitative PCR confirms purity of strain GT, a novel trichloroethene-to- ethene-respiring Dehalococcoides isolate Appl. Environ. Microbiol. 2006, 72 (3) 1980-7
5. Hendrickson, E. R.; Payne, J. A.; Young, R. M.; Starr, M. G.; Perry, M. P.; Fahnestock, S.; Ellis, D. E.; Ebersole, R. C. Molecular analysis of Dehalococcoides 16S ribosomal DNA from chloroethene-contaminated sites throughout North America and Europe Appl. Environ. Microbiol. 2002, 68 (2) 485-95 (Pubitemid 34113032)
6. Agency for Toxic Substances and Diseases Registry, U.S. Department of Health and Human Services, Atlanta, GA, 2007.
7. Arnold, W. A.; Roberts, A. L. Pathways of chlorinated ethylene and chlorinated acetylene reaction with Zn(0) Environ. Sci. Technol. 1998, 32 (19) 3017-3025 (Pubitemid 28475668)
8. Griffin, B. M.; Tiedje, J. M.; Löffler, F. E. Anaerobic microbial reductive dechlorination of tetrachloroethene to predominately trans-1,2-dichloroethene Environ. Sci. Technol. 2004, 38 (16) 4300-3 (Pubitemid 39095223)
9. Futamata, H.; Yoshida, N.; Kurogi, T.; Kaiya, S.; Hiraishi, A. Reductive dechlorination of chloroethenes by Dehalococcoides-containing cultures enriched from a polychlorinated-dioxin-contaminated microcosm ISME J. 2007, 1 (6) 471-9 (Pubitemid 47530653)
10. Kittelmann, S.; Friedrich, M. W. Novel uncultured Chloroflexi dechlorinate perchloroethene to trans-dichloroethene in tidal flat sediments Environ. Microbiol. 2008, 10 (6) 1557-70 (Pubitemid 351670254)
11. Cheng, D.; Chow, W. L.; He, J., A Dehalococcoides-containing co-culture that dechlorinates tetrachloroethene to trans-1,2-dichloroethene. ISME J. 4, (1), 88-97.
12. Miller, G. S.; Milliken, C. E.; Sowers, K. R.; May, H. D. Reductive dechlorination of tetrachloroethene to trans-dichloroethene and cis-dichloroethene by PCB-dechlorinating bacterium DF-1 Environ. Sci. Technol. 2005, 39 (8) 2631-5
13. Cheng, D.; He, J. Isolation and characterization of " Dehalococcoides " sp. strain MB, which dechlorinates tetrachloroethene to trans-1,2-dichloroethene Appl. Environ. Microbiol. 2009, 75 (18) 5910-8
14. Chow, W. L.; Cheng, D.; Wang, S.; He, J., Identification and transcriptional analysis of trans-DCE-producing reductive dehalogenases in Dehalococcoides species. ISME J.
15. Meckenstock, R. U.; Morasch, B.; Griebler, C.; Richnow, H. H. Stable isotope fractionation analysis as a tool to monitor biodegradation in contaminated acquifers J. Contam. Hydrol. 2004, 75 (3-4) 215-55 (Pubitemid 40017643)
16. Sherwood Lollar, B.; Slater, G. F.; Sleep, B.; Witt, M.; Klecka, G. M.; Harkness, M.; Spivack, J. Stable carbon isotope evidence for intrinsic bioremediation of tetrachloroethene and trichloroethene at area 6, Dover Air Force Base Environ. Sci. Technol. 2001, 35 (2) 261-9
17. Cichocka, D.; Imfeld, G.; Richnow, H. H.; Nijenhuis, I. Variability in microbial carbon isotope fractionation of tetra-and trichloroethene upon reductive dechlorination Chemosphere 2008, 71 (4) 639-48
18. Adrian, L.; Szewzyk, U.; Wecke, J.; Görisch, H. Bacterial dehalorespiration with chlorinated benzenes Nature 2000, 408 (6812) 580-3
19. Bunge, M.; Adrian, L.; Kraus, A.; Opel, M.; Lorenz, W. G.; Andreesen, J. R.; Görisch, H.; Lechner, U. Reductive dehalogenation of chlorinated dioxins by an anaerobic bacterium Nature 2003, 421 (6921) 357-60 (Pubitemid 36157930)
20. Jayachandran, G.; Görisch, H.; Adrian, L. Dehalorespiration with hexachlorobenzene and pentachlorobenzene by Dehalococcoides sp. strain CBDB1 Arch. Microbiol. 2003, 180 (6) 411-6 (Pubitemid 38002309)
21. Adrian, L.; Hansen, S. K.; Fung, J. M.; Görisch, H.; Zinder, S. H. Growth of Dehalococcoides strains with chlorophenols as electron acceptors Environ. Sci. Technol. 2007, 41 (7) 2318-23 (Pubitemid 46595192)
22. Kube, M.; Beck, A.; Zinder, S. H.; Kuhl, H.; Reinhardt, R.; Adrian, L. Genome sequence of the chlorinated compound-respiring bacterium Dehalococcoides species strain CBDB1 Nat. Biotechnol. 2005, 23 (10) 1269-73 (Pubitemid 41486854)
23. Hölscher, T.; Görisch, H.; Adrian, L. Reductive dehalogenation of chlorobenzene congeners in cell extracts of Dehalococcoides sp. strain CBDB1 Appl. Environ. Microbiol. 2003, 69 (5) 2999-3001 (Pubitemid 36560385)
24. Nijenhuis, I.; Andert, J.; Beck, K.; Kästner, M.; Diekert, G.; Richnow, H. H. Stable isotope fractionation of tetrachloroethene during reductive dechlorination by Sulfurospirillum multivorans and Desulfitobacterium sp. strain PCE-S and abiotic reactions with cyanocobalamin Appl. Environ. Microbiol. 2005, 71 (7) 3413-9 (Pubitemid 40980502)
25. A. Mariotti, J. C. G., P.; Hubert, P.; Kaiser, R.; Letolle, A.; Tardieux, P. Tardieux Experimental determination of nitrogen kinetic isotope fractionation: Some principles; illustration for the denitrification and nitrification processes Plant Soil 1981, 62 (3) 413-430
26. Elsner, M.; Cwiertny, D. M.; Roberts, A. L.; Lollar, B. S. 1,1,2,2-tetrachloroethane reactions with OH-, Cr(II), granular iron, and a copper-iron bimetal: insights from product formation and associated carbon isotope fractionation Environ. Sci. Technol. 2007, 41 (11) 4111-7 (Pubitemid 46903228)
27. Elsner, M.; Chartrand, M.; Vanstone, N.; Couloume, G. L.; Lollar, B. S. Identifying abiotic chlorinated ethene degradation: characteristic isotope patterns in reaction products with nanoscale zero-valent iron Environ. Sci. Technol. 2008, 42 (16) 5963-70
28. Jones, R. W.; Garland, P. B. Sites and specificity of the reaction of bipyridylium compounds with anaerobic respiratory enzymes of Escherichia coli. Effects of permeability barriers imposed by the cytoplasmic membrane Biochem. J. 1977, 164 (1) 199-211 (Pubitemid 8070683)
29. Mazur, C. S.; Jones, W. J. Hydrogen concentrations in sulfate-reducing estuarine sediments during PCE dehalogenation Environ. Sci. Technol. 2001, 35 (24) 4783-8 (Pubitemid 33144341)
30. He, J.; Holmes, V. F.; Lee, P. K.; Alvarez-Cohen, L. Influence of vitamin B12 and cocultures on the growth of Dehalococcoides isolates in defined medium Appl. Environ. Microbiol. 2007, 73 (9) 2847-53 (Pubitemid 46718566)
31. Cupples, A. M.; Spormann, A. M.; McCarty, P. L. Growth of a Dehalococcoides-like microorganism on vinyl chloride and cis-dichloroethene as electron acceptors as determined by competitive PCR Appl. Environ. Microbiol. 2003, 69 (2) 953-9 (Pubitemid 36204824)
32. Griebler, C.; Adrian, L.; Meckenstock, R. U.; Richnow, H. H. Stable carbon isotope fractionation during aerobic and anaerobic transformation of trichlorobenzene FEMS Microbiol. Ecol. 2004, 48 (3) 313-21 (Pubitemid 38648919)
33. Nijenhuis, I.; Zinder, S. H. Characterization of hydrogenase and reductive dehalogenase activities of Dehalococcoides ethenogenes strain 195 Appl. Environ. Microbiol. 2005, 71 (3) 1664-7 (Pubitemid 40396712)
34. Kliegman, S.; McNeill, K. Dechlorination of chloroethylenes by cob(I)alamin and cobalamin model complexes Dalton Trans 2008, 32, 4191-201
35. Lee, P. K.; Conrad, M. E.; Alvarez-Cohen, L. Stable carbon isotope fractionation of chloroethenes by dehalorespiring isolates Environ. Sci. Technol. 2007, 41 (12) 4277-85 (Pubitemid 46981716)
36. Cichocka, D.; Siegert, M.; Imfeld, G.; Andert, J.; Beck, K.; Diekert, G.; Richnow, H. H.; Nijenhuis, I. Factors controlling the carbon isotope fractionation of tetra-and trichloroethene during reductive dechlorination by Sulfurospirillum ssp. and Desulfitobacterium sp. strain PCE-S FEMS Microbiol. Ecol. 2007, 62 (1) 98-107 (Pubitemid 47508565)
37. Magnuson, J. K.; Stern, R. V.; Gossett, J. M.; Zinder, S. H.; Burris, D. R. Reductive dechlorination of tetrachloroethene to ethene by a two-component enzyme pathway Appl. Environ. Microbiol. 1998, 64 (4) 1270-5 (Pubitemid 28188382)
38. Magnuson, J. K.; Romine, M. F.; Burris, D. R.; Kingsley, M. T. Trichloroethene reductive dehalogenase from Dehalococcoides ethenogenes: Sequence of tceA and substrate range characterization Appl. Environ. Microbiol. 2000, 66 (12) 5141-7 (Pubitemid 32217110)
39. Seshadri, R.; Adrian, L.; Fouts, D. E.; Eisen, J. A.; Phillippy, A. M.; Methe, B. A.; Ward, N. L.; Nelson, W. C.; Deboy, R. T.; Khouri, H. M.; Kolonay, J. F.; Dodson, R. J.; Daugherty, S. C.; Brinkac, L. M.; Sullivan, S. A.; Madupu, R.; Nelson, K. E.; Kang, K. H.; Impraim, M.; Tran, K.; Robinson, J. M.; Forberger, H. A.; Fraser, C. M.; Zinder, S. H.; Heidelberg, J. F. Genome sequence of the PCE-dechlorinating bacterium Dehalococcoides ethenogenes Science 2005, 307 (5706) 105-8 (Pubitemid 40093488)
40. Waller, A. S.; Krajmalnik-Brown, R.; Löffler, F. E.; Edwards, E. A. Multiple reductive-dehalogenase-homologous genes are simultaneously transcribed during dechlorination by Dehalococcoides-containing cultures Appl. Environ. Microbiol. 2005, 71 (12) 8257-64 (Pubitemid 41803952)
41. Adrian, L.; Rahnenführer, J.; Gobom, J.; Hölscher, T. Identification of a chlorobenzene reductive dehalogenase in Dehalococcoides sp. strain CBDB1 Appl. Environ. Microbiol. 2007, 73 (23) 7717-24
42. Morris, R. M.; Fung, J. M.; Rahm, B. G.; Zhang, S.; Freedman, D. L.; Zinder, S. H.; Richardson, R. E. Comparative proteomics of Dehalococcoides spp. reveals strain-specific peptides associated with activity Appl. Environ. Microbiol. 2007, 73 (1) 320-6 (Pubitemid 46079965)
43. Slater, G. F.; Lollar, B. S.; Sleep, B. E.; Edwards, E. A. Variability in carbon isotopic fractionation during biodegradation of chlorinated ethenes: Implications for field applications Environ. Sci. Technol. 2001, 35 (5) 901-7
44. Bloom, Y.; Aravena, R.; Hunkeler, D.; Edwards, E. A.; Frape, S. K. Carbon isotope fractionation during microbial dechlorination of trichloroethene, cis-1,2-Dichloroethene, and vinyl vhloride: Implications for assessment of natural attenuation Environ. Sci. Technol. 2000, 34 (13) 2768-2772 (Pubitemid 30436983)