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Volumn 61, Issue 2, 2011, Pages 249-254

Burkholderia oxyphila sp. nov., a bacterium isolated from acidic forest soil that catabolizes (+)-catechin and its putative aromatic derivatives

Author keywords

[No Author keywords available]

Indexed keywords

4 HYDROXYBENZOIC ACID; BACTERIAL DNA; CARBOHYDRATE; CATECHIN; FATTY ACID; FERULIC ACID; HEXOSE; OLIGOSACCHARIDE; PARA COUMARIC ACID; PENTOSE; PROTOCATECHUIC ACID; RNA 16S; TAXIFOLIN; UBIQUINONE; VANILLIC ACID;

EID: 79951627832     PISSN: 14665026     EISSN: None     Source Type: Journal    
DOI: 10.1099/ijs.0.017368-0     Document Type: Article
Times cited : (27)

References (32)
  • 1
    • 77952737117 scopus 로고    scopus 로고
    • Burkholderia heleia sp. nov., a nitrogen-fixing bacterium isolated from an aquatic plant, Eleocharis dulcis, that grows in highly acidic swamps in actual acid sulfate soil areas of Vietnam
    • Aizawa, T., Ve, N. B., Nakajima, M. & Sunairi, M. (2010). Burkholderia heleia sp. nov., a nitrogen-fixing bacterium isolated from an aquatic plant, Eleocharis dulcis, that grows in highly acidic swamps in actual acid sulfate soil areas of Vietnam. Int J Syst Evol Microbiol 60, 1152-1157.
    • (2010) Int J Syst Evol Microbiol , vol.60 , pp. 1152-1157
    • Aizawa, T.1    Ve, N.B.2    Nakajima, M.3    Sunairi, M.4
  • 2
    • 33750557864 scopus 로고    scopus 로고
    • Mycorrhization helper bacteria: A case of specificity for altering ectomycorrhiza architecture but not ectomycorrhiza formation
    • DOI 10.1007/s00572-006-0068-3
    • Aspray, T. J., Frey-Klett, P., Jones, J. E., Whipps, J. M., Barbaye, J. & Bending, G. D. (2006). Mycorrhization helper bacteria: a case of specificity for altering ectomycorrhiza architecture but not ectomycorrhiza formation. Mycorrhiza 16, 533-541. (Pubitemid 44673601)
    • (2006) Mycorrhiza , vol.16 , Issue.8 , pp. 533-541
    • Aspray, T.J.1    Frey-Klett, P.2    Jones, J.E.3    Whipps, J.M.4    Garbaye, J.5    Bending, G.D.6
  • 7
    • 0041350484 scopus 로고    scopus 로고
    • Diversity and significance of Burkholderia species occupying diverse ecological niches
    • DOI 10.1046/j.1462-2920.2003.00471.x
    • Coenye, T. & Vandamme, P. (2003). Diversity and significance of Burkholderia species occupying diverse ecological niches. Environ Microbiol 5, 719-729. (Pubitemid 37056856)
    • (2003) Environmental Microbiology , vol.5 , Issue.9 , pp. 719-729
    • Coenye, T.1    Vandamme, P.2
  • 8
    • 0035378204 scopus 로고    scopus 로고
    • Burkholderia, a genus rich in plant-associated nitrogen fixers with wide environmental and geographic distribution
    • Estrada-de los Santos, P., Bustillos-Cristales, R. & Caballero-Mellado, J. (2001). Burkholderia, a genus rich in plant-associated nitrogen fixers with wide environmental and geographic distribution. Appl Environ Microbiol 67, 2790-2798.
    • (2001) Appl Environ Microbiol , vol.67 , pp. 2790-2798
    • Estrada-de Los Santos, P.1    Bustillos-Cristales, R.2    Caballero-Mellado, J.3
  • 9
    • 0024358339 scopus 로고
    • Fluorometric deoxyribonucleic acid-deoxyribonucleic acid hybridization in microdilution wells as an alternative to membrane filter hybridization in which radioisotopes are used to determine genetic relatedness among bacterial strains
    • Ezaki, T., Hashimoto, Y. & Yabuuchi, E. (1989). Fluorometric deoxyribonucleic acid-deoxyribonucleic acid hybridization in microdilution wells as an alternative to membrane filter hybridization in which radioisotopes are used to determine genetic relatedness among bacterial strains. Int J Syst Bacteriol 39, 224-229.
    • (1989) Int J Syst Bacteriol , vol.39 , pp. 224-229
    • Ezaki, T.1    Hashimoto, Y.2    Yabuuchi, E.3
  • 10
    • 0000461280 scopus 로고
    • Confidence limits on phylogenies: An approach using the bootstrap
    • Felsenstein, J. (1985). Confidence limits on phylogenies: an approach using the bootstrap. Evolution 39, 783-791.
    • (1985) Evolution , vol.39 , pp. 783-791
    • Felsenstein, J.1
  • 11
    • 0028261409 scopus 로고
    • Lessons from an evolving rRNA: 16S and 23S rRNA structures from a comparative perspective
    • Gutell, R. R., Larsen, N. & Woese, C. R. (1994). Lessons from an evolving rRNA: 16S and 23S rRNA structures from a comparative perspective. Microbiol Rev 58, 10-26.
    • (1994) Microbiol Rev , vol.58 , pp. 10-26
    • Gutell, R.R.1    Larsen, N.2    Woese, C.R.3
  • 13
    • 0000225313 scopus 로고
    • Similarity analysis of rRNAs
    • Edited by P. Gerhardt, R. G. E. Murray & W. A. Wood. Washington, DC: American Society for Microbiology
    • Johnston, J. L. (1994). Similarity analysis of rRNAs. In Methods for General and Molecular Bacteriology, pp. 683-700. Edited by P. Gerhardt, R. G. E. Murray & W. A. Wood. Washington, DC: American Society for Microbiology.
    • (1994) Methods for General and Molecular Bacteriology , pp. 683-700
    • Johnston, J.L.1
  • 14
    • 0019296687 scopus 로고
    • A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences
    • Kimura, M. (1980). A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences. J Mol Evol 16, 111-120.
    • (1980) J Mol Evol , vol.16 , pp. 111-120
    • Kimura, M.1
  • 15
    • 0030902353 scopus 로고    scopus 로고
    • Metabolism of chlorotoluenes by Burkholderia sp. strain PS12 and toluene dioxygenase of Pseudomonas putida F1: Evidence for monooxygenation by toluene and chlorobenzene dioxygenases
    • Lehning, A., Fock, U., Wittich, R.-M., Timmis, K. N. & Pieper, D. H. (1997). Metabolism of chlorotoluenes by Burkholderia sp. strain PS12 and toluene dioxygenase of Pseudomonas putida F1: evidence for monooxygenation by toluene and chlorobenzene dioxygenases. Appl Environ Microbiol 63, 1974-1979. (Pubitemid 27194863)
    • (1997) Applied and Environmental Microbiology , vol.63 , Issue.5 , pp. 1974-1979
    • Lehning, A.1    Fock, U.2    Wittich, R.-M.3    Timmis, K.N.4    Pieper, D.H.5
  • 16
    • 0142104345 scopus 로고    scopus 로고
    • Invasion of Spores of the Arbuscular Mycorrhizal Fungus Gigaspora decipiens by Burkholderia spp
    • DOI 10.1128/AEM.69.10.6250-6256.2003
    • Levy, A., Chang, B. J., Abbott, L. K., Kuo, J., Harnett, G. & Inglis, T. J. J. (2003). Invasion of spores of the arbuscular mycorrhizal fungus Gigaspora decipiens by Burkholderia spp. Appl Environ Microbiol 69, 6250-6256. (Pubitemid 37280351)
    • (2003) Applied and Environmental Microbiology , vol.69 , Issue.10 , pp. 6250-6256
    • Levy, A.1    Chang, B.J.2    Abbott, L.K.3    Kuo, J.4    Harnett, G.5    Inglis, T.J.J.6
  • 19
  • 21
    • 0031080294 scopus 로고    scopus 로고
    • Identification of isoprenoid quinones by Frit-FAB liquid chromatography-mass spectrometry for the chemotaxonomy of microorganisms
    • DOI 10.1016/S0167-7012(96)00972-4, PII S0167701296009724
    • Nishijima, M., Araki-Sakai, M. & Sano, H. (1997). Identification of isoprenoid quinones by frit-FAB liquid chromatography-mass spectrometry for the chemotaxonomy of microorganisms. J Microbiol Methods 28, 113-122. (Pubitemid 27219551)
    • (1997) Journal of Microbiological Methods , vol.28 , Issue.2 , pp. 113-122
    • Nishijima, M.1    Araki-Sakai, M.2    Sano, H.3
  • 22
    • 33746371062 scopus 로고    scopus 로고
    • Efficient production of 2-pyrone 4,6-dicarboxylic acid as a novel polymer-based material from protocatechuate by microbial function
    • DOI 10.1007/s00253-005-0203-7
    • Otsuka, Y., Nakamura, M., Shigehara, K., Sugimura, K., Masai, E., Ohara, S. & Katayama, Y. (2006). Efficient production of 2-pyrone 4,6-dicarboxylic acid as a novel polymer-based material from protocatechuate by microbial function. Appl Microbiol Biotechnol 71, 608-614. (Pubitemid 44114788)
    • (2006) Applied Microbiology and Biotechnology , vol.71 , Issue.5 , pp. 608-614
    • Otsuka, Y.1    Nakamura, M.2    Shigehara, K.3    Sugimura, K.4    Masai, E.5    Ohara, S.6    Katayama, Y.7
  • 25
    • 0023375195 scopus 로고
    • The neighbor-joining method: A new method for reconstructing phylogenetic trees
    • Saitou, N. & Nei, M. (1987). The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol Biol Evol 4, 406-425.
    • (1987) Mol Biol Evol , vol.4 , pp. 406-425
    • Saitou, N.1    Nei, M.2
  • 28
    • 0027499824 scopus 로고
    • Characterization of Bacillus brevis with descriptions of Bacillus migulanus sp. nov., Bacillus choshinensis sp. nov., Bacillus parabrevis sp. nov., and Bacillus galactophilus sp. nov
    • Takagi, H., Shida, O., Kadowaki, K., Komagata, K. & Udaka, S. (1993). Characterization of Bacillus brevis with descriptions of Bacillusmigulanus sp. nov., Bacillus choshinensis sp. nov., Bacillus parabrevis sp. nov., and Bacillus galactophilus sp. nov. Int J Syst Bacteriol 43, 221-231. (Pubitemid 23118459)
    • (1993) International Journal of Systematic Bacteriology , vol.43 , Issue.2 , pp. 221-231
    • Takagi, H.1    Shida, O.2    Kadowaki, K.3    Komagata, K.4    Udaka, S.5
  • 29
    • 0031574072 scopus 로고    scopus 로고
    • The CLUSTAL X windows interface: Flexible strategies for multiple sequence alignment aided by quality analysis tools
    • DOI 10.1093/nar/25.24.4876
    • Thompson, J. D., Gibson, T. J., Plewniak, F., Jeanmougin, F. & Higgins, D. G. (1997). The CLUSTAL-X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res 25, 4876-4882. (Pubitemid 28022245)
    • (1997) Nucleic Acids Research , vol.25 , Issue.24 , pp. 4876-4882
    • Thompson, J.D.1    Gibson, T.J.2    Plewniak, F.3    Jeanmougin, F.4    Higgins, D.G.5
  • 31
    • 34247148733 scopus 로고    scopus 로고
    • Diversity and role of Burkholderia spp
    • Edited by T. Coenye & P. Vandamme. Wymondham, UK: Horizon Bioscience
    • Vandamme, P., Govan, J. R. W. & LiPuma, J. J. (2007). Diversity and role of Burkholderia spp. In Burkholderia: Molecular Microbiology and Genomics, pp. 1-28. Edited by T. Coenye & P. Vandamme. Wymondham, UK: Horizon Bioscience.
    • (2007) Burkholderia: Molecular Microbiology and Genomics , pp. 1-28
    • Vandamme, P.1    Govan, J.R.W.2    LiPuma, J.J.3
  • 32
    • 0018970655 scopus 로고
    • PKJ1, a naturally occurring conjugative plasmid coding for toluene degradation and resistance to streptomycin and sulfonamides
    • Yano, K. & Nishi, T. (1980). pKJ, a naturally occurring conjugative plasmid coding for toluene degradation and resistance to streptomycin and sulfonamides. J Bacteriol 143, 552-560. (Pubitemid 10017621)
    • (1980) Journal of Bacteriology , vol.143 , Issue.2 , pp. 552-560
    • Yano, K.1    Nishi, T.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.