On the origin of Solanum nigrum: Can networks help?

Molecular Biology Reports

Volumn 38, Issue 2, 2011, Pages 1171-1185

  Poczai, Péter ^a   Hyvönen, Jaakko ^a  

^a UNIVERSITY OF HELSINKI   (Finland)

Author keywords

Black nightshades; Inter simple sequence repeats (ISSR); Phylogenetic networks; Solanum nigrum; Splits graphs; Start codon targeted polymorphism (SCoT)

Indexed keywords

ARTICLE; CHLOROPLAST; CONTROLLED STUDY; DIPLOIDY; GENE LOCUS; GENE SEQUENCE; GENETIC MARKER; GENETIC POLYMORPHISM; GENETIC RECOMBINATION; GENETIC VARIABILITY; HEXAPLOIDY; INTER SIMPLE SEQUENCE REPEAT; NONHUMAN; NUCLEOTIDE SEQUENCE; PHYLOGENY; PLANT GENE; PLANT GENETICS; PLANT GENOME; POLYPLOIDY; SOLANUM NIGRUM; SPECIES DIFFERENTIATION; START CODON; TETRAPLOIDY; TRNL F GENE;

CHLOROPLASTS; CODON; COMPUTATIONAL BIOLOGY; DIPLOIDY; GENETIC MARKERS; GENOME, PLANT; GENOTYPE; MODELS, GENETIC; NUCLEIC ACID HYBRIDIZATION; PHENOTYPE; PHYLOGENY; PLANT LEAVES; POLYMORPHISM, GENETIC; POLYPLOIDY; SOLANUM NIGRUM;

SOLANUM; SOLANUM NIGRUM;

EID: 79951567388     PISSN: 03014851     EISSN: 15734978     Source Type: Journal    
DOI: 10.1007/s11033-010-0215-y     Document Type: Article

References (134)

1. A Jacoby MT Labuschagne 2006 Hybridization studies of five species of the Solanum nigrum complex found in South Africa and two cocktail tomato cultivars Euphytica 149 303 307 (Pubitemid 44060886)
2. Edmonds JM, Chweya JA (1997) Black nightshades. Solanum nigrum L. and related species. Promoting the conservation and use of underutilized and neglected crops, vol 15. International Plant Genetic Resources Institute, Rome, Italy
3. C Lehmann C Biela S Töpfl G Jansen R Vögel 2007 Solanum scabrum-a potential source of a coloring plant extract Euphytica 158 189 199 (Pubitemid 47572900)
4. GN Mwai JC Onyango O Abukusta-Onyango 2007 Taxon identification and characterization of African nightshades (Solanum L. Section Solanum) Afr J Food Agric Nutr Dev 7 4 1 13
5. Schippers RR (2000) African indigenous vegetables. An overview of the cultivated species. Natural Resources Institute/ACP-EU Technical Centre of Agriculture and Rural Cooperation, Catham, UK, pp 147-176
6. Manoko MLK, van der Weerden GM (2004) Solanum villosum. In: Grubben GJH, Denton OA (eds) Plant resources of Tropical Africa 2 vegetables. PROTA Foundation Wageningen/CTA Wageningen, Backuys Publishers, Leiden, The Netherlands, pp 503-507
7. Manoko MLK (2007) A systematic study of African Solanum L. section Solanum (Solanaceae). PhD thesis, Radboud Univesity Nijmegen, The Netherlands
8. WG Flier GMB van der Bosch LJ Turkensteen 2003 Epidemiological importance of Solanum sisymbriifolium, S nigrum and S. dulcamara as alternative hosts for Phytophthora infestans Plant Pathol 52 595 603 (Pubitemid 37261444)
9. R Lebecka 2008 Host-pathogen interaction between Phytophthora infestans and Solanum nigrum, S. villosum, and S. scabrum Eur J Plant Pathol 120 233 240 (Pubitemid 351170559)
10. S Kamoun E Huitema VGAA Vleeshouwers 1999 Resitance to Oomycetes: a general role of the hypersensitive response? Trends Plant Sci 4 196 200 10322560
11. MA Campos SG Ribeiro DJ Rigden DC Monte MF Grossi de Sa 2002 Putative pathogenesis-related genes within Solanum nigrum L. var. americanum genome: isolation of two gnes soding for PR5-like proteins, phylogenetic and sequence analysis Physiol Mol Plant Pathol 61 4 205 216 1:CAS:528:DC%2BD38Xps1Sjtr8%3D (Pubitemid 36035034)
12. LT Colon R Eijlander DJ Budding MMJ Pieters J Hoogendoorn MT Van-Ijzendoorn 1993 Resistance to potato late blight (Phytophthora infestans (Mont.) de Bary) in Solanum nigrum, S. villosum and their sexual hybrids with S. tuberosum and S. demissum Euphytica 66 55 64
13. R Eijlander WJ Stiekema 1994 Biological containment of potato (Solanum tuberosum): outcrossing to the related wild species black nightshade (Solanum nigrum) and bittersweet (Solanum dulcamara) Sex Plant Reprod 7 29 40
14. K Horsman JEM Bergervoet E Jacobsen 1997 Somatic hybridization between Solanum tuberosum and species of the S nigrum complex: selection of vigorously growing and flowering plants Euphytica 96 345 352 (Pubitemid 27383644)
15. E Zimnoch-Guzowska R Lebecka A Kryszczuk U Maciejewska A Szczerbakowa B Wielgat 2003 Resistance to Phytophthora infestans in somatic hybrids of Solanum nigrum L and diploid potato Theor Appl Genet 107 43 48 1:STN:280: DC%2BD3szgvVShsg%3D%3D 12835931 (Pubitemid 36803490)
16. R Lebecka 2009 Inheritance of resistance in Solanum nigrum to Phytophthora infestans Eur J Plant Pathol 124 345 348
17. HH Flor 1942 Inheritance of pathogenicity in Melamspora lini Phytopathology 32 653 669
18. HH Flor 1971 Current status of the gene-for-gene concept Annu Rev Phytopathol 9 275 296
19. Child A, Lester RN (2001) Synopsis of the genus Solanum L. and its infrageneric taxa. In: van den Berg RG, Barendse GWM, van der Weerden GM, Mariani C (eds) Solanaceae V: advances in taxonomy and utilization. Nijmegen University Press, Nijmegen, pp 39-52
20. JM Edmonds 1972 A synopsis of the taxonomy of Solanum L section Solanum (Maurella) in South America Kew Bull 27 95 114
21. JM Edmonds 1986 Biosystematics of Solanum sarrachoides Sendtn and S. physalifolium Rubsy (S. nitidibaccatum Bitter) Bot J Linn Soc 92 1 38
22. GL Stabbins Jr EF Paddock 1949 The Solanum nigrum complex in Pacific North America Madroño 10 70 81
23. WG D'Arcy 1974 Solanum and its close relatives in Florida Ann Miss Bot Gard 61 3 819 867
24. RJF Henderson 1974 Solanum nigrum L (Solanaceae) and related species in Australia Contrib Queensl Herb 16 1 78
25. Edmonds JM (1979) Biosystematics of Solanum L. section Solanum (Maurella). In: Hawkes JG, Lester RN, Skelding AD (eds) The biology and taxonomy of the Solanaceae. Academic Press, London, pp 529-548
26. Lester RN, Daunay M-C (2003) Diversity of African vegetable Solanum and its implications for a better understanding of plant domestication. In: Küpfer H, Ochsmann J (eds) Rudolf mansfeld and plant genetic resources. Proceedings of a symposium dedicated for the 100th birthday of Rudolf Mansfeld. Schriften zu genetischen Ressourcen, Band 22, pp 137-152
27. J Venkateswarlu MK Rao 1972 Breeding systems, crossablilty relationships and isolating mechanisms in the Solanum nigrum complex Cytologia 37 317 326
28. AC Leslie 1978 The occurrence of Solanum nigrum L × S sarrachoides Sendtn in Britain Watsonia 12 1 29 32
29. JM Edmonds 1981 The artificial synthesis of Solanum × procurrens Leslie (S nigrum L. × S. sarrachoides Sendtn) Watsonia 13 203 233
30. Linnaeus C (1753) Species plantarum, vol 2. Stockholm
31. MS Defelice, et al. 2003 The black nightshades, Solanum nigrum L-poison, poultice, and pie Weed Technol 17 421 427
32. AG Ogg Jr BS Rogers EE Schilling 1981 Characterization of black nightshade (Solanum nigrum) and related species in the United States Weed Sci 29 27 32
33. EE Schilling 1981 Systematics of Solanum sect Solanum (Solanaceae) in North America Syst Bot 6 172 185
34. Edmonds JM (2005) Solanum L. section Solanum. In: Pope GV, Martin ES (eds) Flora Zambesiaca, vol 8(4). Royal Botanic Gardens, Kew, UK, pp 81-86
35. Edmonds JM (2006) Solanum L. section Solanum. In: Thulin M (ed) Flora Somalia, vol 3. Royal Botanic Gardens, Kew, UK, pp 207-208
36. Planetary Biodiversity Inventory Solanum Project. http://www.nhm.ac.uk/ solanaceaesource/
37. S Knapp L Bohs M Nee DM Spooner 2004 Solanaceae: a model for linking genomics with biodiversity Comp Funct Genom 5 285 291 1:CAS:528: DC%2BD2cXjvFCisL8%3D (Pubitemid 38744670)
38. Dehmer KJ (2001) Conclusions on the taxonomy of the Solanum nigrum complex by molecular analysis of IPK germplasm accessions. In: van den Berg RG, Barendse GWM, van der Weerden GM, Mariani C (eds) Solanaceae V: advances in taxonomy and utilization. Nijmegen University Press, The Netherlands, pp 85-96
39. Jacoby A (2003) Genetic variability in the Solanum nigrum complex and related species in South Africa. PhD thesis, University of the Free State Bloemfontein, South Africa
40. Olet EA (2004) Taxonomy of Solanum L. section Solanum in Uganda. PhD thesis, Agricultural University of Norway
41. Poczai P (2007) Phylogenetic analysis of infrageneric groups in the genus Solanum. MSc thesis, University of Pannonia, Hungary
42. Bohs L (2005) Major clades in Solanum based on ndhF sequences. In: Keating RC, Hollowell VC, Croat TB (eds) A festschrift for William G. D'Arcy: the legacy of a taxonomist. Monographs in Systematic Botany from the Missouri Botanical Garden, vol 104. Missouri Botanical Garden Press, St. Louis, pp 27-49
43. TL Weese L Bohs 2007 A three-gene phylogeny of the genus Solanum (Solanaceae) Syst Bot 32 2 445 463 (Pubitemid 47052478)
44. P Poczai J Taller I Szabó 2008 Analysis of phylogenetic relationships in the genus Solanum (Solanaceae) as revealed by RAPD markers Plant Syst Evol 275 59 67 1:CAS:528:DC%2BD1cXht1Sqs7bI
45. S Danert 1970 Infragenerische Taxa der Gattung Solanum L Kulturpflanze 18 253 297
46. WG D'Arcy 1972 Solanaceae studies II: typification of subdivisions of Solanum Ann Miss Bot Gard 59 262 278
47. D'Arcy WG (1991) The Solanaceae since 1976, with a review of its biogeography. In: Hawkes JG, Lester RN, Nee M, Estrada N (eds) Solanaceae III: taxonomy, chemistry, evolution. Royal Botanic Gardens, Kew, UK, pp 75-137
48. L Bohs RG Olmstead 1997 Phylogenetic relationships in Solanum (Solanaceae) based on ndhF sequences Syst Bot 22 5 17 (Pubitemid 27354262)
49. Bohs L, Olmstead RG (1999) Solanum phylogeny inferred from chloroplast DNA sequence data. In: Nee M, Symon DE, Lester RN, Jessop JP (eds) Solanaceae IV: advances in biology and utilization. Royal Botanic Gardens, Kew, UK, pp 97-110
50. RG Olmstead JD Palmer 1997 Implications for the phylogeny, classification, and biogeography of Solanum from cpDNA restriction site variation Syst Bot 22 19 29 (Pubitemid 27354263)
51. Hunziker AT (2001) The genera of Solanaceae. ARG Gantner Verlag, Ruggel, Lichtenstein
52. Pamidimarri DVNS, Mastan SG, Rahman H, Reddy MP (2009) Molecular characterization and genetic diversity analysis of Jatropha curcas L. in India using RAPD and AFLP analysis. Mol Biol Rep. doi: 10.1007/s11033-009-9712-2
53. RS Kumar KT Parthiban MG Rao 2009 Molecular characterization of Jatropha genetic resources through inter-simple sequence repeat (ISSR) markers Mol Biol Rep 36 1951 1956
54. Stracke S, Njoroge G, Hammer K (1996) Genetic diversity in the collection of Solanum nigrum L the Gatersleben genebank. In: Begmann F, Ehling C, Falge R (eds) Vergleichende aspekte der nutzung und erhaltung pflanzen- und tiergenetischer ressourcen (Schriften zu genetischen ressourcen, 5). IGR/ZADI, Bonn, pp 320-324
55. P Poczai K Mátyás J Taller I Szabó 2010 Study on the origin of the rarely cultivated edible Solanum species: morphological and molecular data Biol Plant 54 3 543 546
56. Dehmer KJ, Stracke S (1999) Molecular analyses of genebank accessions of the Solanum nigrum complex. In: Andrews S, Leslie AC, Alexander C (eds) Third international symposium on the taxonomy of cultivated plants. Royal Botanic Gardens, Kew, UK, pp 343-345
57. Dehmer KJ (2003) Molecular genome analyses as tool for efficient ex situ conservation and utilization of plant genetic resources. In: Forsline PL, Fidegheli C, Richards K, Meerow A, Nienhus J, Williams D, Thörn E, Tombolato AFC, Knüpffer H, Stoner A (eds) Plant genetic resources: the fabric of horticulture's future. Proceedings of the XXVI interantional horticultural congress, 11-17 August 2002, Toronto, Canada, pp 151-160
58. KJ Dehmer K Hammer 2004 Taxonomic status and geographic provenance of germplasm accessions in the Solanum nigrum L complex: AFLP data Genet Res Crop Evol 51 551 558 1:CAS:528:DC%2BD2cXjtFKqtrY%3D (Pubitemid 38995104)
59. A Jacoby MT Labuschagne CD Viljoen 2003 Genetic relationships between Southern African Solanum retroflexum Dun and other related species measured by morphological and DNA markers Euphytica 132 109 113 1:CAS:528: DC%2BD3sXlt1yktbw%3D (Pubitemid 36946833)
60. EA Olet M Huen KA Lye 2005 African crop or poisonous nightshade; the enigma of poisonous or edible black nightshades solved Afr J Ecol 43 158 161 (Pubitemid 40817147)
61. EA Olet M Heun KA Lye 2006 A new subspecies of Solanum scabrum Miller found in Uganda Novon 16 508 511 (Pubitemid 46066744)
62. MLK Manoko RG van den Berg RMC Feron GM van der Weerden C Mariani 2007 AFLP markers support separation of Solanum nodiflorum from Solanum americanum senu stricto (Solanaceae) Plant Syst Evol 267 1 11 (Pubitemid 47402417)
63. MLK Manoko RG van den Berg RMC Feron GM van der Weerden C Mariani 2008 Genetic diversity of the African hexaploid species of Solanum scabrum Mill. and Solanum nigrum L. (Solanaceae) Genetic Res Crop Evol 55 3 409 418 (Pubitemid 351537864)
64. P Poczai J Taller I Szabó 2009 Molecular genetic study on a historical Solanum (Solanaceae) herbarium specimen collected by Paulus Kitaibel in the 18th century Acta Bot Hung 51 3-4 337 346 1:CAS:528:DC%2BD1MXhsVWgsL%2FK
65. V Makarenkov P Legendre Y Desdevises 2003 Modeling phylogenetic relationships using reticulated networks Zool Scr 33 1 89 96
66. PS Soltis 2005 Ancient and recent polyploidy in the angiosperms New Phytol 166 5 8 15760346
67. CR Linder LH Rieseberg 2004 Reconstructing patterns of reticulate evolution in plants Am J Bot 91 10 1700 1708 18677414 (Pubitemid 43193727)
68. Nakhleh L (2010) Evolutionary phylogenetic networks: models and issues. In: Health L, Ramakrishnan N (eds) The problem solving handbook for computational biology and bioinformatics. Springer, New York, pp 1-34
69. D Bryant V Moulton 2004 NeighborNet: an agglomerative method for the construction of phylogenetic networks Mol Biol Evol 21 2 255 265 1:CAS:528:DC%2BD2cXisFWmurs%3D 14660700 (Pubitemid 38314614)
70. DH Huson D Bryant 2006 Application of phylogenetic networks in evolutionary studies Mol Biol Evol 23 254 267 1:CAS:528:DC%2BD28XntValsw%3D%3D 16221896 (Pubitemid 43100040)
71. BCY Collard DJ Mackill 2009 Start codon targeted (SCoT) polymorphism: a simple, novel DNA marker technique for generating gene-targeted markers in plants Plant Mol Biol Rep 27 86 93 1:CAS:528:DC%2BD1MXhtVOntLnL
72. MMJ Jacobs RG van den Berg VGAA Vleeshouwers M Visser R Mank M Sengers R Hoeskatra B Vosman 2008 AFLP analysis reveals a lack of phylogenetic structure within Solanum section Petota BMC Evol Biol 8 145 18479504
73. SE Kingston LD Adams PE Rosel 2009 Testing mitochondrial sequences and anonymous nuclear markers for phylogeny reconstruction in a rapidly radiating group: molecular systematics of Delphininae (Cetacea:Odontoceti:Delphinidae) BMC Evol Biol 9 245 19811651
74. A Rubio-Moraga R Castillo-López L Gómez-Gómez O Ahrazem 2009 Saffron is a monomorphic species as revealed by RAPD, ISSR and microsatellite analyses BMC Res Notes 2 189 19772674
75. D Croll IR Sanders 2009 Recombination in Glomus intraradices, a supposed ancient asexual arbuscular mycorrhizal fungus BMC Evol Biol 9 13 19146661
76. n microsatellites from rice for inter- and intra-specific variability studies BMC Evol Biol 1 7 1:STN:280: DC%2BD3srgs1WrsA%3D%3D 11710957
77. AK Awasthi GM Nagaraja GV Naik S Kanginakdudru K Thangavelu J Nagaraju 2004 Genetic diversity and relationships in mulberry (genus Morus) as revealed by RAPD and ISSR marker assays BMC Genetics 5 16
78. M Sica G Gamba S Montieri L Gaudio S Aceto 2005 ISSR markers show differentiation among Italian populations of Asparagus acutifolius L BMC Genetics 6 17 15777470
79. CJ Jones KJ Edwards S Castaglione MO Winfield F Sala C van de Wiel G Bredemejer B Vosman M Matthes A Daly R Brettschneider P Bettini M Buiatti E Maestri A Malcevschi N Marmiroli E Aert G Volckaert R Lincero J Rueda A Vazquez A Karp 1997 Reproducibility testing of RAPD, AFLP and SSR markers in plants by a network of European laboratories Mol Breed 3 381 390 1:CAS:528: DyaK2sXntFensbg%3D (Pubitemid 127507208)
80. HM Meudt AC Clarke 2007 Almost forgotten or latest practice? AFLP applications, analyses and advances Trends Plant Sci 12 106 117 1:CAS:528:DC%2BD2sXivVShsbY%3D 17303467 (Pubitemid 46389498)
81. WJM Koopman 2005 Phylogenetic signal in AFLP data sets Syst Biol 54 197 217 16012092 (Pubitemid 40707803)
82. JP Kardolus HJ van Eck RG van den Berg 1998 The potential of AFLPs in biosystematics: a first application in Solanum taxonomy Plant Syst Evol 210 87 103 (Pubitemid 28209213)
83. RG Van den Berg G Bryan A del Rio DM Spooner 2002 Reduction of species in the wild potato Solanum section Petota series Longipedicellata: AFLP, RAPD and chloroplast SSR data Theor Appl Genet 105 1109 1114 (Pubitemid 36053135)
84. SI Lara-Cabrera DM Spooner 2004 Taxonomy of North and Central American diploid wild potato (Solanum sect Petota) species: AFLP data Plant Syst Evol 248 129 142 1:CAS:528:DC%2BD2cXnvVektLk%3D (Pubitemid 39384663)
85. CE McGregor E van Treuren R Hoekstra ThJL van Hintum 2002 Analysis of the wild potato germplasm of the series Acaulia with AFLPs: implications for ex situ conservation Theor Appl Genet 104 146 156 1:CAS:528:DC%2BD38XitFyjtbw%3D 12579440 (Pubitemid 36064871)
86. DM Spooner K McLean G Ramsay R Waugh GJ Bryan 2005 A single domestication for potato based on multilocus amplified fragment length polymorphism genotyping PNAS 102 14694 14699 1:CAS:528:DC%2BD2MXhtFKjsb7L 16203994 (Pubitemid 41457118)
87. P Taberlet L Gielly G Pautou J Bouvet 1991 Universal primers for amplification of three non-coding regions of chloroplast DNA Plant Mol Biol 17 5 1105 1109 1:CAS:528:DyaK38Xhslel 1932684
88. SE Kingston PE Rosel 2004 Genetic differentiation among recently diverged Delphinid taxa determined using AFLP markers J Hered 95 1 10 1:CAS:528:DC%2BD2cXhtVKqsrk%3D 14757724 (Pubitemid 38199286)
89. D Botstein RL White M Skolnick RW Davis 1980 Construction of a genetic linkage map in man using restriction fragment length polymorphisms Am J Hum Genet 32 314 331 1:CAS:528:DyaL3cXkvFamtbc%3D 6247908 (Pubitemid 11105557)
90. Liu BH (1998) Statistical genomics: linkage, mapping and QTL analysis. CRC Press, New Yrok, pp 158-159
91. PICcalc an online program for calculating Polymorphic Information Content (PIC). http://www.georgikon.hu/pic/english
92. Henry RJ (1997) Practical applications of plant molecular biology. Chapman & Hall, London, pp 59-98
93. J De Riek E Calsyn I Everaert E Van Bockstaele M De Loose 2001 AFLP based alternatives for the assessment of distinctness, uniformity and stability of sugar beet varieties Theor Appl Genet 103 1254 1265 (Pubitemid 34045661)
94. S Bolaric S Barth AE Melchinger UK Posselt 2005 Genetic diversity in European perennial rygrass cultivars investigated with RAPD markers Plant Breed 124 161 166 1:CAS:528:DC%2BD2MXktlyisrw%3D (Pubitemid 40561071)
95. SPLITSTREE v.4.6. http://www.splitstree.org
96. TC Bruen H Philippe D Bryant 2006 A simple and robust statistical test for detecting the presence of recombination Genetics 172 2665 2681 1:CAS:528:DC%2BD28XkvFOgtLc%3D 16489234
97. F Jeanmougin JD Thompson M Gouy DG Higgins TJ Gibson 1998 Multiple sequence alignment with Clustal X Trends Biochem Sci 23 403 405 1:CAS:528:DyaK1cXntlansLg%3D 9810230 (Pubitemid 28511382)
98. Goloboff PA (1994) NONA: a tree searching program. Program and documentation. www.cladistics.com/aboutNona.htm
99. Nixon KC (2002) Winclada. Version 1.00.08. www.cladistics.com/aboutWinc. htm. the author, Ithaca, NY
100. PA Goloboff JS Farris KC Nixon 2008 TNT, a free program for phylogenetic analysis Cladistics 24 774 786
101. N Saitou M Nei 1987 The neighbor-joining method: a new method for reconstructing phylogenetic trees Mol Biol Evol 4 4 406 425 1:STN:280: DyaL1c7ovFSjsA%3D%3D 3447015
102. B Kilian H Özkan O Deusch S Effgen A Brandolini J Kohl W Martin F Salamini 2007 Independent wheat B and G genome origins in outcrossing Aegilops progenitor haplotypes Mol Biol Evol 24 1 217 227 1:CAS:528: DC%2BD2sXnvFWmtw%3D%3D 17053048 (Pubitemid 46026296)
103. C Esser N Ahmadinejad C Wiegand C Rotte F Sebastiani G Gelius-Dietrich K Henze E Kretschmann E Richly D Leister D Bryant MA Steel P Lockhart D Penny W Martin 2004 A genome phylogeny for mitochondria among α-proteobactera and predominantly eubacterial ancestry of yeast nuclear genes Mol Biol Evol 21 9 1643 1660 1:CAS:528:DC%2BD2cXntVCitL4%3D 15155797 (Pubitemid 39096881)
104. BR Holland S Benthin PJ Lockhart V Moulton KT Huber 2008 Using supernetworks to distinguish hybridization from lineage-sorting BMC Evol Biol 8 202 18625077
105. HM Meudt PJ Lockhart D Bryant 2009 Species delimitation and phylogeny of New Zealand plant species radiation BMC Evol Biol 9 111 19457251
106. E Willerslev MTP Gilbert J Binladen SYW Ho PF Campos A Ratan LP Tomsho RR da Fonseca A Sher V Kuzentsova M Nowak-Kemp TL Roth W Miller SC Schuster 2009 Analysis of complete mitochondrial genomes from extinct and extant rhinoceroses reveals lack of phylogenetic resolution BMC Evol Biol 9 95 19432984
107. SL Tandon GR Rao 1966 Genome analysis in Solanum nigrum L J Cytol Genet 1 41 45
108. J Soria CB Heiser Jr 1959 The garden huckleberry and the sunberry Baileya 7 33 35
109. GR Rao R Khan AH Khan 1977 Cytomorphology and nature of sterility barriers of interspecific hybrids of some species of Solanum nigrum complex Indian J Genet Plant Breed 37 7 54 61
110. PV Bhiravamurty P Rethy 1984 Origin and evolution of tetraploid forms within the Solanum nigrum L complex Proc Indian Acad Sci (Plant Sci) 93 5 553 560
111. JM Edmonds SM Glidewell 1977 Acrylamide gel electrophoresis of seed proteins from some Solanum (section Solanum) species Plant Syst Evol 127 277 291
112. MK Rao 1971 Cytology of a pentaploid hybrid and genome analysis in Solanum nigrum L Genetica 42 157 164
113. MS Chennaveeraiah SR Patil 1968 Some studies in the Solanum nigrum L complex Genetica Iberica 20 23 26
114. GR Rao SL Tandon 1969 Relationships between tetraploid Solanum nigrum and Solanum luteum Sci Cult 35 688 689
115. Sharma AK, Bal AK (1961) Cytological studies in several species of non-tuberiferous Solanum with special reference to polyploid types of S. nigrum L. In: Proceedings of the 48th Indian science congress Pt. III, pp 295-296
116. SS Sultana SS Alam 2007 Fluorescent chromosome banding of Solanum nigrum L and Solanum villosum L. from Bangladesh Cytologia 72 213 219
117. SL Tandon GR Rao 1964 Cytogenetical investigations in relation to mechanism of evolution in hexaploid Solanum nigrum L Nature 201 1348 1349
118. Tandon SL, Rao GR (1974) Solanum nigrum L. In: Hutchinson SJB (ed) Evolutionary studies in world crops. Cambridge University Press, UK, pp 109-117
119. J Venkateswarlu MK Rao 1969 Chromosome numerical mosaicism in some hybrids of the Solanum nigrum complex Genetica 40 400 406
120. J Venkateswarlu MK Rao 1971 Inheritance of fruit colour in the Solanum nigrum complex Proc Indian Acad Sci B 74 3 137 141
121. A Ganapathi GR Rao 1987 Cytology of hybrids between Solanum nigrum L and Solanum furcatum Dun Proc Indian Acad Sci (Plant Sci) 97 5 371 375
122. CB Heiser J Soria DL Burton 1965 A numerical taxonomic study of Solanum species and hybrids Am Nat 99 471 488
123. E Van der Walt A Van Schalkwyk DK Berger 2008 Genetic relationships between South African Solanum retroflexum and other related species using partial 18S sequencing S Afr J Bot 74 2 391
124. Kirkpatrick JB (1991) Tasmanian native bush: a management handbook. Tasmanian Environmental Centre, Hobart, Tasmania
125. K Song P Lu K Tang TC Osborn 1995 Rapid genome change in systhetic polyploids of Brassica and its implications fro polyploid evolution PNAS 92 7719 7723 1:CAS:528:DyaK2MXnsFOnsLk%3D 7644483
126. NY Komarova GW Grimm V Hemleben RA Volkov 2008 Molecular evolution of 35S rDNA and taxonomic status of Lycopersicon within Solanum sect. Petota Plant Syst Evol 276 59 71 1:CAS:528:DC%2BD1cXhtlKrtL3J
127. IJ Leitch MD Bennett 1997 Polyploidy in angiosperms Trends Plant Sci 2 470 476
128. H Özkan AA Levy M Feldman 2001 Allopolyploidy-induced rapid genome evolution in the wheat (Aegilops-Triticum) group Plant Cell 13 1735 1747 11487689 (Pubitemid 32781987)
129. TC Osborn JC Pires JA Birchler DL Auger ZJ Chen H-S Lee L Comai A Madlung RW Doerge V Colot RA Martienssen 2003 Understanding mechanisms of novel gene expression in polyploids Trends Genet 19 3 141 147 1:CAS:528: DC%2BD3sXhsVaisrY%3D 12615008 (Pubitemid 36279181)
130. K McBreen PJ Lockhart 2006 Reconstructing reticulate evolutionary histories of plants Trends Plant Sci 11 8 398 404 1:CAS:528:DC%2BD28Xns1Kjurk%3D 16839803 (Pubitemid 44108708)
131. NE Bell J Hyvönen 2010 Phylogeny of the moss class Polytrichopsida (Bryophyta): generic-level structure and incongruent gene trees Mol Phylogenet Evol 55 381 398 1:CAS:528:DC%2BC3cXktlCis7Y%3D 20152915
132. P Poczai J Hyvönen 2010 Nuclear ribosomal spacer regions in plant phylogenetics: problems and prospects Mol Biol Rep 37 1897 1912 1:CAS:528:DC%2BC3cXis1Wmu7c%3D 19626457
133. JA Schlueter P Dixon C Granger D Grant L Clark JJ Doyle RC Shoemaker 2004 Mining EST database to resolve evolutionary events in major crop species Genome 47 868 876 1:CAS:528:DC%2BD2cXhtVyksLbL 15499401 (Pubitemid 40033900)
134. C Gebhardt B Walkemeier H Heselewski A Barakat M Delseny K Stüber 2003 Comparative mapping between potato (Solanum tubereosum) and Arabidopsis thaliana reveal structurally conserved domain and ancient duplications in the potato genome Plant J 34 529 541 1:CAS:528:DC%2BD3sXkslOjur4%3D 12753591 (Pubitemid 36631883)