Molecular characterization of Jatropha genetic resources through inter-simple sequence repeat (ISSR) markers

Molecular Biology Reports

Volumn 36, Issue 7, 2009, Pages 1951-1956

  Senthil Kumar, R ^a   Parthiban, K T ^a   Govinda Rao, M ^a  

^a Research Institute   (India)

Author keywords

Biodiesel; Genetic diversity; ISSR PCR; Jatropha species

Indexed keywords

BIODIESEL;

ARTICLE; GENE AMPLIFICATION; GENETIC POLYMORPHISM; GENETIC RESOURCE; GENETIC VARIABILITY; GENOTYPE; INTER SIMPLE SEQUENCE REPEAT; JATROPHA; JATROPHA CURCAS; JATROPHA GLANDULIFERA; JATROPHA GOSSYPIFOLIA; JATROPHA INTEGERRIMA; JATROPHA MAHESHWARII; JATROPHA MULTIFIDA; JATROPHA PODAGRICA; JATROPHA TANJORENSIS; JATROPHA VILLOSA; NONHUMAN; PLANT BREEDING; POLYMERASE CHAIN REACTION; PRINCIPAL COMPONENT ANALYSIS;

GENETIC MARKERS; JATROPHA; MINISATELLITE REPEATS; PHYLOGENY; POLYMORPHISM, GENETIC; PRINCIPAL COMPONENT ANALYSIS; SPECIES SPECIFICITY;

JATROPHA; JATROPHA CURCAS; JATROPHA GLANDULIFERA; JATROPHA INTEGERRIMA; JATROPHA MULTIFIDA; JATROPHA PODAGRICA; JATROPHA TANJORENSIS;

EID: 68149124200     PISSN: 03014851     EISSN: 15734978     Source Type: Journal    
DOI: 10.1007/s11033-008-9404-3     Document Type: Article

References (30)

1. Anonymous (1959) The wealth of India. Raw Material, vol V. H-K, Ed, pp 293-295
2. R Banerji AR Chowdhry G Misra G Sunarsanam SC Verma GS Srivastava 1985 Jatropha seed oils for energy Biomass 8 277 282 10.1016/0144-4565(85)90060-5
3. MW Blair O Panaud SR McCouch 1999 Inter-simple sequence repeats (ISSR) amplification for analysis of micro satellite motif frequency and fingerprinting in rice (Oryza sativa L.) Theor Appl Genet 98 780 792 10.1007/s001220051135 (Pubitemid 29212080)
4. DC Chandhari DN Joshi 1999 Jatropha curcas a multipurpose species for economic property and wasteland development Adv Plant Sci Res India 9 35 39
5. YM Charters MJ Wilkinsion 2000 The use of self-pollinatated progenies as "in-groups" for the genetic characterization of cocoa germplasm Theor Appl Genet 100 160 166 10.1007/PL00002903
6. B Dehgan 1984 Phylogenetic significance of interspecific hybridization in Jatropha (Euphobiaceae) Syst Bot 9 467 478 10.2307/2418796
7. SL Dellaporta J Wood JB Hick 1983 A plant DNA minipreparation; version II Plant Mol Biol Rep 1 19 21 10.1007/BF02712670
8. DQ Fang ML Roose 1997 Identification of closely related citrus cultivars with inter-simple sequence repeat makers Theor Appl Genet 95 408 417 10.1007/s001220050577 (Pubitemid 27392950)
9. S Ganesh Ram KT Parthiban R Senthil Kumar 2008 Genetic diversity among Jatropha species as revealed by RAPD markers Genet Resour Crop Evol 55 6 803 809 10.1007/s10722-007-9285-7
10. HS Ginwal SS Phartyal PS Rawat RL Srivastava 2005 Seed source variation in morphology, germination and seedling growth of Jatropha crucas Linn. in central India Silvae Genet 54 2 76 80
11. A Gonzalez A Coulson R Brettell 2002 Development of DNA markers (ISSRs) in mango Acta Hortic 575 139 143
12. G Hao DH Lee JS Lee NS Lee 2002 A study of taxonomical relationships among species of Korean Allium sect. Sacculiferum (Alliaceae) and related species using inter-simple sequence repeat (ISSR) markers Bot Bull Acad Sin 43 63 68
13. Heller J (1996) Physic nut- Jatropha curcas L. Promoting the conservation and use of underutilized and neglected crop. International Plant Genetic Resources Institute, Rome
14. YP Hong MJ Kim KN Hong 2003 Genetic diversity in natural populations of two geographic isolates of Korean black raspberry J Hortic Sci Biotechnol 78 350 354
15. P Jaccard 1908 Nouvelles recherches sur la distribution florale Bull Soc Vaud Nat 44 223 270
16. JA Lai WC Yang JY Hsiao 2001 An assessment of genetic relationships in cultivated tea clones and native wild tea in Taiwan using RAPD and ISSR markers Bot Bull Acad Sin 42 93 100
17. G Martin A Mayeux 1985 Curcas oil (Jatropha curcas L.): a possible fuel Agric Trop 9 73 75
18. S Moreno JP Martin JM Oritz 1998 Inter-simple sequence repeats PCR for characterization of closely related grapevine germplasm Euphytica 101 117 125 10.1023/A:1018379805873
19. T Nagaoka Y Ogihara 1997 Applicability of inter-simple sequence repeat polymorphisms in wheat for use as DNA markers in comparison to RFLP and RAPD markers Theor Appl Genet 94 597 602 10.1007/s001220050456 (Pubitemid 27201452)
20. M Nei F Tajima Y Tateno 1983 Accuracy of estimated phylogenetic tres from molecular date. II. Gene frequency data J Mol Evol 19 153 170 10.1007/BF02300753
21. K Openshaw 2000 A review of Jatropha curcas. An oil plant of unfulfilled promise Biomass Bioenergy 19 1 15 10.1016/S0961-9534(00)00019-2 (Pubitemid 30495883)
22. Rohlf FJ (2002) NTSYS-pc: numerical taxonomy system Ver 2.1. Exeter Publishing Ltd., Setauket, New York
23. PM Ruas CF Ruas L Rampim VP Carvalho EA Ruas T Sera 2003 Genetic relationship in Coffea species and parentage determination of inter-specific hybrids using ISSR (inter-simple sequence repeat) markers Genet Mol Biol 26 319 327 10.1590/S1415-47572003000300017
24. Sneath PHA, Sokal RR (1973) Numerical taxonomy. Freeman Press, San Francisco, CA, USA
25. Sujatha M (1996) Genetic and tissue culture studies in Castor (Ricinus communis L.) and related genera. Ph.D. Dissertation, Osmania Univ., Hyderabad, India
26. M Sujatha HPS Makkar K Becker 2005 Shoot bud proliferation from axillary nodes and leaf sections of non-toxin Jatropha curcas L. Plant Growth Regul 47 83 90 10.1007/s10725-005-0859-0 (Pubitemid 41502204)
27. Y Takeda 1982 Development study on Jatropha curcas oil as a possible substitute for diesel engine oil in Thailand J Agric Assoc China 120 1 8
28. AD Wolfe QY Xiang SR Kephart 1998 Assessing hybridization in natural populations of Penstemon (Scrophulariaceae) using hypervariable inter simple sequence repeat (ISSR) bands Mol Ecol 7 1107 1125 10.1046/j.1365-294x.1998. 00425.x (Pubitemid 28428489)
29. R Yasodha M Kathirvel R Sumathi K Gurumurthi Sunil Archak J Nagraju 2004 Genetic analysis of casuarina using ISSR and FISSR markers Genetica 122 161 172 10.1023/B:GENE.0000040938.13344.70 (Pubitemid 39225106)
30. Zobel BJ, Talbert J (1984) Applied tree improvement. Wiley, New York 503 pp