Evolution and diversification of brook weeds (Samolus, Samolaceae, Ericales)

International Journal of Plant Sciences

Volumn 172, Issue 2, 2011, Pages 250-266

  Wanntorp, Livia ^a   Anderberg, Arne A ^a  

^a SWEDISH MUSEUM OF NATURAL HISTORY   (Sweden)

Author keywords

Ericales; Molecular phylogeny; Morphology; Samolus

Indexed keywords

BAYESIAN ANALYSIS; BIOGEOGRAPHY; DICOTYLEDON; ENDEMIC SPECIES; HYBRID; MITOCHONDRIAL DNA; MORPHOLOGY; PARSIMONY ANALYSIS; PHYLOGENY;

AUSTRALIA; NEW ZEALAND; NORTH AMERICA;

ANDROSACE; ERICALES; SAMOLUS; SAMOLUS EBRACTEATUS; SAMOLUS REPENS; SAMOLUS VALERANDI;

EID: 79951522054     PISSN: 10585893     EISSN: None     Source Type: Journal    
DOI: 10.1086/657647     Document Type: Article

References (47)

1. Anderberg AA, C Rydin, M Källersjö2002 Phylogenetic relationships in the order Ericales s.l.: analyses of molecular data from five genes from the plastid and mitochondrial genomes. Am J Bot 89: 677-687. (Pubitemid 34439725)
2. Anderberg AA, B Ståhl, M Källersjö1998 Phylogenetic relationships in the Primulales inferred from rbcL sequence data. Plant Syst Evol 211:93-102. (Pubitemid 28281535)
3. - 2000 Maesaceae, a new primuloid family in the order Ericales s.l. Taxon 49:183-187. (Pubitemid 30337828)
4. Baudo F 1843 Anagalleidarum index. Ann Sci Nat II 20:350.
5. Bremer B, K Bremer, N Heidari, P Erixon, RG Olmstead, AA Anderberg, M Källersjö, E Barkhordarian 2002 Phylogenetics of asterids based on 3 coding and 3 non-coding chloroplast markers and the utility of non-coding DNA at higher taxonomic levels. Mol Phylogenet Evol 24:274-301. (Pubitemid 34995919)
6. Caris P, L Ronse De Craene, E Smets, D Clinckemaillie 2000 Floral development of three Maesa species, with special emphasis on the position of the genus within Primulales. Ann Bot 86:87-97.
7. Caris P, E Smets 2004 A floral ontogenetic study on the sister group relationship between the genus Samolus (Primulaceae) and the Theophrastaceae. Am J Bot 91:627-643. (Pubitemid 43175016)
8. Channell RB 1958 A new species of Samolus (Primulaceae) from Mexico. Rhodora. J N Engl Bot Club 60:1-6.
9. Correll DC, MC Johnston 1970 Manual of vascular plants of Texas. Texas Research Foundation, Renner.
10. Don RH, PT Cox, BJWainwright, K Baker, JSMattick 1991 "Touchdown" PCR to circumvent spurious priming during gene amplification. Nucleic Acids Res 19:4008.
11. Duretto MF 2009 103 Theophrastaceae. Page 1 in MF Duretto, ed. Flora of Tasmania online. http://demo1.tmag.tas.gov.au/treatments/families/ Theophrastaceae/Theophrastaceae-2009-1.pdf.
12. Greene EL 1909 Novitates boreali-Americanae IV. Rep Spec Nov Regni Veg 7:195-197.
13. Hamilton MB 1999 Four primer pairs for the amplifications of chloroplast intergenic regions with intraspecific variation. Mol Ecol 8:521-523. (Pubitemid 29170549)
14. Henrickson J 1983 A revision of Samolus ebracteatus (sensu lato) (Primulaceae). Southwest Nat 28:303-314.
15. Holmgren PK, NH Holmgren, LC Barnett 1990 Index herbariorum 1: the herbaria of the world. New York Botanical Garden, New York.
16. Hultén E 1971 The circumpolar plants. II. Dicotyledons. K Sven Vetenska-Akad Handl, Fjärde Serien 13:148.
17. International Plant Names Index 2010 http://www.ipni.org.
18. Jacobs SWL 1980 A new species of Samolus (Primulaceae). J Adelaide Bot Gard 2:187-189.
19. KällersjöM, G Bergqvist, AA Anderberg 2000 Generic realignment in primuloid families of the Ericales s.l.: a phylogenetic analysis based on DNA sequences from three chloroplast genes and morphology. Am J Bot 87:1325-1341.
20. Keighery GJ 1988 A new species of Samolus (Primulaceae) from Western Australia. Nord J Bot 8:329-330.
21. Mabberley DJ 2008 Mabberley's plant-book: a portable dictionary of plants, their classifications and uses. 3rd ed. Cambridge University Press, Cambridge.
22. Muller J 1981 Fossil pollen records of extant angiosperms. Bot Rev 47:1-142.
23. Olmstead RG, HJ Michaels, KM Scott, JD Palmer 1992 Monophyly of the Asteridae and identification of their major lineages inferred from DNA sequences of rbcL. Ann Mo Bot Gard 79:249-265.
24. Oxelman B, M Lidén, D Berglund 1997 Chloroplast rps16 intron phylogeny of the tribe Sileneae (Caryophyllaceae). Plant Syst Evol 206:392-410.
25. Pax F, R Knuth 1905 Samolus. Pages 336-344 in A Engler, ed. Das Pflanzenreich 22 (IV. 237). Engelmann, Leipzig.
26. Posada D 2008 jModelTest: phylogenetic model averaging. Mol Biol Evol 25:1253-1256. (Pubitemid 351882013)
27. Robinson BL 1892 Descriptions of new plants collected in Mexico by C. G. Pringle in 1890 and 1891, with notes upon a few other species. Proc Am Acad Arts Sci 27:165-185.
28. Ronquist F, JP Huelsenback 2003 MrBayes: Bayesian inference of phylogeny. Manual online. http://mrbayes.csit.fsu.edu/manual.php.
29. Rydin C, KR Pedersen, EMFriis 2004 On the evolutionary history of Ephedra: Creataceous fossils and extant molecules. Proc Natl Acad Sci USA 101:16571-16576. (Pubitemid 39557754)
30. Schönenberger J, AA Anderberg, KJ Sytsma 2005 Molecular phylogenetics and patterns of floral evolution in the Ericales. Int J Plant Sci 166:265-288. (Pubitemid 40428673)
31. Simmons MP, H Ochoterena 2000 Gaps as characters in sequencebased phylogenetic analyses. Syst Biol 49:369-381.
32. Small JK 1903 Flora of the southeastern United States. Privately published, New York.
33. Staden R, K Beal, JK Bonfield 1998 The Staden package. Pages 115-130 in S Misener, SA Krawets, eds. Bioinformatics methods and protocols. Computer methods in molecular biology. Vol 132. Human, Totawa, NJ.
34. Ståhl B 2004 Samolaceae. Pages 387-389 in K Kubitzki, ed. The families and genera of vascular plants. Vol 6. Springer, Berlin.
35. Stevens PF 2008 Angiosperm phylogeny website. Version 9, June 2008. http://www.mobot.org/MOBOT/research/APweb/.
36. Suh Y, LB Thien, HE Reeve, EA Zimmer 1993 Molecular evolution and phylogenetic implications of internal transcribed spacer sequences of ribosomal DNA in Winteraceae. Am J Bot 80:1042-1055.
37. Swenson U, K Bremer 1997 Patterns of floral evolution of four Asteraceae genera (Senecioneae, Blennospermatinae) and the origin of white flowers in New Zealand. Syst Biol 46:407-425. (Pubitemid 127138564)
38. Swofford DL 2002 PAUP*: phylogenetic analysis using parsimony (*and other methods). Version 4.0b10. Sinauer, Sunderland, MA.
39. Taberlet P, L Gielly, G Pautou, J Bouvet 1991 Universal primers for amplification of three non-coding regions of chloroplast DNA. Plant Mol Biol 17:1105-1109.
40. Thompson JD, TJ Gibson, F Plewniak, F Jeanmougin, DG Higgings 1997 The ClustalX windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res 24:4876-4882. (Pubitemid 28022245)
41. Wagstaff SJ, I Breitwieser, U Swenson 2006 Origin and relationships of the austral genus Abrotanella (Asteraceae) inferred from DNA sequences. Taxon 55:95-106.
42. Wheeler JR 1987 Primulaceae. Pages 196-198 in NG Marchant, JR Wheeler, BL Rye, EM Bennett, NS Lander, TD Macfarlane, eds. Flora of the Perth region. Pt 1. Department of Conservation and Land Management, Perth.
43. - 1992 Primulaceae. Pages 276-277 in JR Wheeler, BD Rye, AJG Wilson, eds. Flora of the Kimberley region. Department of Conservation and Land Management, Perth.
44. Wiens JJ 2003 Missing data, incomplete taxa, and phylogenetic accuracy. Syst Biol 52:528-538. (Pubitemid 36990380)
45. Wiens JJ, TW Reeder 1995 Combining data sets with different numbers of taxa for phylogenetic analysis. Syst Biol 44:548-558. (Pubitemid 126021228)
46. Wilgenbusch JC, DLWarren, DL Swofford 2004 AWTY: a system for graphical exploration of MCMC convergence in Bayesian phylogenetic inference. http://ceb.csit.fsu.edu/awty.
47. Zurawski B,MPerrot,WBottomley, PRWhitfield 1981 The structure of the gene for the large subunit of ribulose-1, 5-bisphosphate carboxylase from spinach chloroplast DNA. Nucleic Acids Res 9:3251-3270.