메뉴 건너뛰기




Volumn 398, Issue 1-2, 2011, Pages 56-62

Extracting a century of preserved molecular and population demographic data from archived otoliths in the endangered European eel (Anguilla anguilla L.)

Author keywords

Age determination; Anguilla anguilla; Archived DNA; European eel; Microsatellite genotyping; Otoliths

Indexed keywords

AGE; CONSERVATION MANAGEMENT; DEMOGRAPHIC HISTORY; EEL; ENDANGERED SPECIES; GENETIC MARKER; GENOTYPE; MITOCHONDRIAL DNA; MOLECULAR ANALYSIS; OTOLITH; POLYMERASE CHAIN REACTION;

EID: 79551682424     PISSN: 00220981     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.jembe.2010.12.010     Document Type: Article
Times cited : (7)

References (43)
  • 2
    • 33847051947 scopus 로고    scopus 로고
    • The molecular ecologist's guide to expressed sequence tags
    • Bouck A., Vision T. The molecular ecologist's guide to expressed sequence tags. Mol. Ecol. 2007, 16(5):907-924.
    • (2007) Mol. Ecol. , vol.16 , Issue.5 , pp. 907-924
    • Bouck, A.1    Vision, T.2
  • 3
    • 33845957681 scopus 로고    scopus 로고
    • Noninvasive population genetics: a review of sample source, diet, fragment length and microsatellite motif effects on amplification success and genotyping error rates
    • Broquet T., Menard N., Petit E. Noninvasive population genetics: a review of sample source, diet, fragment length and microsatellite motif effects on amplification success and genotyping error rates. Conserv. Genet. 2007, 8(1):249-260.
    • (2007) Conserv. Genet. , vol.8 , Issue.1 , pp. 249-260
    • Broquet, T.1    Menard, N.2    Petit, E.3
  • 5
    • 0029142085 scopus 로고
    • Graphical and statistical methods for determining the consistency of age determinations
    • Campana S.E., Annand M.C., Mcmillan J.I. Graphical and statistical methods for determining the consistency of age determinations. Trans. Am. Fish. Soc. 1995, 124(1):131-138.
    • (1995) Trans. Am. Fish. Soc. , vol.124 , Issue.1 , pp. 131-138
    • Campana, S.E.1    Annand, M.C.2    Mcmillan, J.I.3
  • 6
    • 0020415821 scopus 로고
    • A statistical method for evaluating the reproducibility of age determination
    • Chang W.Y.B. A statistical method for evaluating the reproducibility of age determination. Can. J. Fish. Aquat. Sci. 1982, 39(8):1208-1210.
    • (1982) Can. J. Fish. Aquat. Sci. , vol.39 , Issue.8 , pp. 1208-1210
    • Chang, W.Y.B.1
  • 7
    • 34848816112 scopus 로고    scopus 로고
    • A comparsion of two age determination techniques commonly used for eels Anguilla anguilla (L.)
    • Cullen P., McCarthy T.K. A comparsion of two age determination techniques commonly used for eels Anguilla anguilla (L.). Ir. Nat. J. 2003, 27(8):301-305.
    • (2003) Ir. Nat. J. , vol.27 , Issue.8 , pp. 301-305
    • Cullen, P.1    McCarthy, T.K.2
  • 8
    • 65249133438 scopus 로고    scopus 로고
    • Influence of DNA isolation from historical otoliths on nuclear-mitochondrial marker amplification and age determination in an overexploited fish, the common sole (Solea solea L.)
    • Cuveliers E.L., Bolle L.J., Volckaert F.A.M., Maes G.E. Influence of DNA isolation from historical otoliths on nuclear-mitochondrial marker amplification and age determination in an overexploited fish, the common sole (Solea solea L.). Mol. Ecol. Resour. 2009, 9(3):725-732.
    • (2009) Mol. Ecol. Resour. , vol.9 , Issue.3 , pp. 725-732
    • Cuveliers, E.L.1    Bolle, L.J.2    Volckaert, F.A.M.3    Maes, G.E.4
  • 9
    • 0034118004 scopus 로고    scopus 로고
    • The fractal geometry of the European eel stock
    • Dekker W. The fractal geometry of the European eel stock. ICES J. Mar. Sci. 2000, 57(1):109-121.
    • (2000) ICES J. Mar. Sci. , vol.57 , Issue.1 , pp. 109-121
    • Dekker, W.1
  • 10
    • 2342555207 scopus 로고    scopus 로고
    • Did lack of spawners cause the collapse of the European eel, Anguilla anguilla?
    • Dekker W. Did lack of spawners cause the collapse of the European eel, Anguilla anguilla?. Fish. Manag. Ecol. 2003, 10(6):365-376.
    • (2003) Fish. Manag. Ecol. , vol.10 , Issue.6 , pp. 365-376
    • Dekker, W.1
  • 11
    • 58549093571 scopus 로고    scopus 로고
    • Council Regulation (EC) No 1100/2007 of 18 September 2007 - establishing measures for the recovery of the stock of European eel
    • European Commission.
    • European Commission Council Regulation (EC) No 1100/2007 of 18 September 2007 - establishing measures for the recovery of the stock of European eel. Off. J. Eur. Union 2007, L248:17.
    • (2007) Off. J. Eur. Union , vol.L248 , pp. 17
  • 12
    • 34748820606 scopus 로고    scopus 로고
    • Effect of DNA extraction on ageing success in coral trout (Plectropomus leopardus) otoliths
    • Heath D., Lou D.C., Ovenden J., Begg G.A. Effect of DNA extraction on ageing success in coral trout (Plectropomus leopardus) otoliths. J. Fish Biol. 2007, 71:302-307.
    • (2007) J. Fish Biol. , vol.71 , pp. 302-307
    • Heath, D.1    Lou, D.C.2    Ovenden, J.3    Begg, G.A.4
  • 14
    • 43049131127 scopus 로고    scopus 로고
    • Palaeogenomics
    • Hofreiter M. Palaeogenomics. C.R. Palevol 2008, 7(2-3):113-124.
    • (2008) C.R. Palevol , vol.7 , Issue.2-3 , pp. 113-124
    • Hofreiter, M.1
  • 15
    • 0032993297 scopus 로고    scopus 로고
    • A nondestructive technique for the recovery of DNA from dried fish otoliths for subsequent molecular genetic analysis
    • Hutchinson W.F., Carvalho G.R., Rogers S.I. A nondestructive technique for the recovery of DNA from dried fish otoliths for subsequent molecular genetic analysis. Mol. Ecol. 1999, 8(5):893-894.
    • (1999) Mol. Ecol. , vol.8 , Issue.5 , pp. 893-894
    • Hutchinson, W.F.1    Carvalho, G.R.2    Rogers, S.I.3
  • 16
    • 0142074342 scopus 로고    scopus 로고
    • Temporal analysis of archived samples indicates marked genetic changes in declining North Sea cod (Gadus morhua)
    • Hutchinson W.F., van Oosterhout C., Rogers S.I., Carvalho G.R. Temporal analysis of archived samples indicates marked genetic changes in declining North Sea cod (Gadus morhua). Proc. R. Soc. B 2003, 270(1529):2125-2132.
    • (2003) Proc. R. Soc. B , vol.270 , Issue.1529 , pp. 2125-2132
    • Hutchinson, W.F.1    van Oosterhout, C.2    Rogers, S.I.3    Carvalho, G.R.4
  • 20
    • 0026312638 scopus 로고
    • Between-reader bias and variability in the age-determination process
    • Kimura D.K., Lyons J.J. Between-reader bias and variability in the age-determination process. Fish. Bull. 1991, 89(1):53-60.
    • (1991) Fish. Bull. , vol.89 , Issue.1 , pp. 53-60
    • Kimura, D.K.1    Lyons, J.J.2
  • 21
    • 52649133834 scopus 로고    scopus 로고
    • Ancient DNA applications for wildlife conservation
    • Leonard J.A. Ancient DNA applications for wildlife conservation. Mol. Ecol. 2008, 17(19):4186-4196.
    • (2008) Mol. Ecol. , vol.17 , Issue.19 , pp. 4186-4196
    • Leonard, J.A.1
  • 22
    • 58149166901 scopus 로고    scopus 로고
    • Validation of annulus in otolith and estimation of growth rate for Japanese eel Anguilla japonica in tropical southern Taiwan
    • Lin Y.J., Tzeng W.N. Validation of annulus in otolith and estimation of growth rate for Japanese eel Anguilla japonica in tropical southern Taiwan. Environ. Biol. Fish. 2009, 84(1):79-87.
    • (2009) Environ. Biol. Fish. , vol.84 , Issue.1 , pp. 79-87
    • Lin, Y.J.1    Tzeng, W.N.2
  • 23
    • 35948977634 scopus 로고    scopus 로고
    • Challenges for genetic research in European eel management
    • Maes G.E., Volckaert F.A.M. Challenges for genetic research in European eel management. ICES J. Mar. Sci. 2007, 64(7):1463-1471.
    • (2007) ICES J. Mar. Sci. , vol.64 , Issue.7 , pp. 1463-1471
    • Maes, G.E.1    Volckaert, F.A.M.2
  • 24
    • 0034915201 scopus 로고    scopus 로고
    • Quantitative polymerase chain reaction analysis of DNA from noninvasive samples for accurate microsatellite genotyping of wild chimpanzees (Pan troglodytes verus)
    • Morin P.A., Chambers K.E., Boesch C., Vigilant L. Quantitative polymerase chain reaction analysis of DNA from noninvasive samples for accurate microsatellite genotyping of wild chimpanzees (Pan troglodytes verus). Mol. Ecol. 2001, 10(7):1835-1844.
    • (2001) Mol. Ecol. , vol.10 , Issue.7 , pp. 1835-1844
    • Morin, P.A.1    Chambers, K.E.2    Boesch, C.3    Vigilant, L.4
  • 26
    • 56549112524 scopus 로고    scopus 로고
    • Waking the dead: the value of population genetic analyses of historical samples
    • Nielsen E.E., Hansen M.M. Waking the dead: the value of population genetic analyses of historical samples. Fish Fish. 2008, 9(4):450-461.
    • (2008) Fish Fish. , vol.9 , Issue.4 , pp. 450-461
    • Nielsen, E.E.1    Hansen, M.M.2
  • 27
    • 0030970638 scopus 로고    scopus 로고
    • Analysis of microsatellite DNA from old scale samples of Atlantic salmon Salmo salar: a comparison of genetic composition over 60years
    • Nielsen E.E., Hansen M.M., Loeschcke V. Analysis of microsatellite DNA from old scale samples of Atlantic salmon Salmo salar: a comparison of genetic composition over 60years. Mol. Ecol. 1997, 6(5):487-492.
    • (1997) Mol. Ecol. , vol.6 , Issue.5 , pp. 487-492
    • Nielsen, E.E.1    Hansen, M.M.2    Loeschcke, V.3
  • 28
    • 0032857226 scopus 로고    scopus 로고
    • Analysis of DNA from old scale samples: technical aspects, applications and perspectives for conservation
    • Nielsen E.E., Hansen M.M., Loeschcke V. Analysis of DNA from old scale samples: technical aspects, applications and perspectives for conservation. Hereditas 1999, 130(3):265-276.
    • (1999) Hereditas , vol.130 , Issue.3 , pp. 265-276
    • Nielsen, E.E.1    Hansen, M.M.2    Loeschcke, V.3
  • 30
    • 0032880393 scopus 로고    scopus 로고
    • BOTTLENECK: a computer program for detecting recent reductions in the effective population size using allele frequency data
    • Piry S., Luikart G., Cornuet J.M. BOTTLENECK: a computer program for detecting recent reductions in the effective population size using allele frequency data. J. Hered. 1999, 90(4):502-503.
    • (1999) J. Hered. , vol.90 , Issue.4 , pp. 502-503
    • Piry, S.1    Luikart, G.2    Cornuet, J.M.3
  • 31
    • 30044440451 scopus 로고    scopus 로고
    • Genotyping errors: causes, consequences and solutions
    • Pompanon F., Bonin A., Bellemain E., Taberlet P. Genotyping errors: causes, consequences and solutions. Nat. Rev. Genet. 2005, 6(11):847-859.
    • (2005) Nat. Rev. Genet. , vol.6 , Issue.11 , pp. 847-859
    • Pompanon, F.1    Bonin, A.2    Bellemain, E.3    Taberlet, P.4
  • 32
    • 33645109111 scopus 로고    scopus 로고
    • Long-term stability and effective population size in North Sea and Baltic Sea cod (Gadus morhua)
    • Poulsen N.A., Nielsen E.E., Schierup M.H., Loeschcke V., Gronkjaer P. Long-term stability and effective population size in North Sea and Baltic Sea cod (Gadus morhua). Mol. Ecol. 2006, 15(2):321-331.
    • (2006) Mol. Ecol. , vol.15 , Issue.2 , pp. 321-331
    • Poulsen, N.A.1    Nielsen, E.E.2    Schierup, M.H.3    Loeschcke, V.4    Gronkjaer, P.5
  • 33
    • 33751100111 scopus 로고    scopus 로고
    • Precision and bias in the age determination of blue whiting, Micromesistius poutassou (Risso, 1810), within and between age-readers
    • Power G.R., King P.A., Kelly C.J., McGrath D., Mullins E., Gullaksen O. Precision and bias in the age determination of blue whiting, Micromesistius poutassou (Risso, 1810), within and between age-readers. Fish. Res. 2006, 80(2-3):312-321.
    • (2006) Fish. Res. , vol.80 , Issue.2-3 , pp. 312-321
    • Power, G.R.1    King, P.A.2    Kelly, C.J.3    McGrath, D.4    Mullins, E.5    Gullaksen, O.6
  • 34
    • 58949095496 scopus 로고    scopus 로고
    • Isolation and characterization of expressed sequence tag-linked microsatellite loci for the European eel (Anguilla anguilla)
    • Pujolar J.M., Maes G.E., Van Houdt J.K.J., Zane L. Isolation and characterization of expressed sequence tag-linked microsatellite loci for the European eel (Anguilla anguilla). Mol. Ecol. Resour. 2009, 9(1):233-235.
    • (2009) Mol. Ecol. Resour. , vol.9 , Issue.1 , pp. 233-235
    • Pujolar, J.M.1    Maes, G.E.2    Van Houdt, J.K.J.3    Zane, L.4
  • 35
    • 34248549305 scopus 로고    scopus 로고
    • Comparison and optimization of ancient DNA extraction
    • Rohland N., Hofreiter M. Comparison and optimization of ancient DNA extraction. Biotechniques 2007, 42(3):343-352.
    • (2007) Biotechniques , vol.42 , Issue.3 , pp. 343-352
    • Rohland, N.1    Hofreiter, M.2
  • 36
    • 0000593219 scopus 로고    scopus 로고
    • Stability in the historical pattern of genetic structure of Newfoundland cod (Gadus Morhua) despite the catastrophic decline in population size from 1964 to 1994
    • Ruzzante D.E., Taggart C.T., Doyle R.W., Cook D. Stability in the historical pattern of genetic structure of Newfoundland cod (Gadus Morhua) despite the catastrophic decline in population size from 1964 to 1994. Conserv. Genet. 2001, 2:257-269.
    • (2001) Conserv. Genet. , vol.2 , pp. 257-269
    • Ruzzante, D.E.1    Taggart, C.T.2    Doyle, R.W.3    Cook, D.4
  • 37
    • 33645894192 scopus 로고    scopus 로고
    • Microsatellites for ecologists: a practical guide to using and evaluating microsatellite markers
    • Selkoe K.A., Toonen R.J. Microsatellites for ecologists: a practical guide to using and evaluating microsatellite markers. Ecol. Lett. 2006, 9(5):615-629.
    • (2006) Ecol. Lett. , vol.9 , Issue.5 , pp. 615-629
    • Selkoe, K.A.1    Toonen, R.J.2
  • 38
    • 69549139892 scopus 로고    scopus 로고
    • Direct multiplex sequencing (DMPS)-a novel method for targeted high-throughput sequencing of ancient and highly degraded DNA
    • Stiller M., Knapp M., Stenzel U., Hofreiter M., Meyer M. Direct multiplex sequencing (DMPS)-a novel method for targeted high-throughput sequencing of ancient and highly degraded DNA. Genome Res. 2009, 19(10):1843-1848.
    • (2009) Genome Res. , vol.19 , Issue.10 , pp. 1843-1848
    • Stiller, M.1    Knapp, M.2    Stenzel, U.3    Hofreiter, M.4    Meyer, M.5
  • 39
    • 0345020452 scopus 로고    scopus 로고
    • Accuracy and precision in eel age estimation, using otoliths of known and unknown age
    • Svedang H., Wickstrom H., Reizenstein M., Holmgren K., Florenius P. Accuracy and precision in eel age estimation, using otoliths of known and unknown age. J. Fish Biol. 1998, 53(2):456-464.
    • (1998) J. Fish Biol. , vol.53 , Issue.2 , pp. 456-464
    • Svedang, H.1    Wickstrom, H.2    Reizenstein, M.3    Holmgren, K.4    Florenius, P.5
  • 41
    • 77955881572 scopus 로고    scopus 로고
    • Does DNA extraction affect the physical and chemical composition of historical cod (Gadus Morhua) otoliths?
    • Therkildsen N.O., Nielsen E.E., Hüssy K., Meldrup D., Geffen A.J. Does DNA extraction affect the physical and chemical composition of historical cod (Gadus Morhua) otoliths?. ICES J. Mar. Sci. 2010, 67:1251-1259.
    • (2010) ICES J. Mar. Sci. , vol.67 , pp. 1251-1259
    • Therkildsen, N.O.1    Nielsen, E.E.2    Hüssy, K.3    Meldrup, D.4    Geffen, A.J.5
  • 42
    • 36549023365 scopus 로고    scopus 로고
    • Back to the future: museum specimens in population genetics
    • Wandeler P., Hoeck P.E.A., Keller L.F. Back to the future: museum specimens in population genetics. Trends Ecol. Evol. 2007, 22(12):634-642.
    • (2007) Trends Ecol. Evol. , vol.22 , Issue.12 , pp. 634-642
    • Wandeler, P.1    Hoeck, P.E.A.2    Keller, L.F.3
  • 43
    • 0021566877 scopus 로고
    • Estimating F-statistics for the analysis of population structure
    • Weir B.S., Cockerham C.C. Estimating F-statistics for the analysis of population structure. Evolution 1984, 38(6):1358-1370.
    • (1984) Evolution , vol.38 , Issue.6 , pp. 1358-1370
    • Weir, B.S.1    Cockerham, C.C.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.